RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 Q4G0T1 1027 aa27.52■■■□□ 2
LRFN4-202ENST00000393952 GPT2Q8TD30 523 aa27.52■■■□□ 2
LRFN4-202ENST00000393952 FERMT2Q96AC1 680 aa27.52■■■□□ 2
LRFN4-202ENST00000393952 LENG9Q96B70 501 aa27.52■■■□□ 2
LRFN4-202ENST00000393952 MTMR9Q96QG7 549 aa27.52■■■□□ 2
LRFN4-202ENST00000393952 DNAJC25-GNG10A0A024R161 153 aa27.51■■□□□ 1.99
LRFN4-202ENST00000393952 IGLV3-22A0A075B6J6 115 aa27.51■■□□□ 1.99
LRFN4-202ENST00000393952 SOWAHBA6NEL2 793 aa27.51■■□□□ 1.99
LRFN4-202ENST00000393952 MAPK4P31152 587 aa27.51■■□□□ 1.99
LRFN4-202ENST00000393952 MRPS9P82933 396 aaKnown RBP27.51■■□□□ 1.99
LRFN4-202ENST00000393952 VWA3AA6NCI4 1184 aa27.5■■□□□ 1.99
LRFN4-202ENST00000393952 NR3C2P08235 984 aa27.5■■□□□ 1.99
LRFN4-202ENST00000393952 MAP2K2P36507 400 aa27.5■■□□□ 1.99
LRFN4-202ENST00000393952 PRPHP41219 470 aa27.5■■□□□ 1.99
LRFN4-202ENST00000393952 CEP55Q53EZ4 464 aa27.5■■□□□ 1.99
LRFN4-202ENST00000393952 GPR142Q7Z601 462 aa27.5■■□□□ 1.99
LRFN4-202ENST00000393952 DNERQ8NFT8 737 aa27.5■■□□□ 1.99
LRFN4-202ENST00000393952 UIMC1Q96RL1 719 aa27.5■■□□□ 1.99
LRFN4-202ENST00000393952 DDX49Q9Y6V7 483 aaKnown RBP27.5■■□□□ 1.99
LRFN4-202ENST00000393952 IVNS1ABPQ9Y6Y0 642 aa27.5■■□□□ 1.99
LRFN4-202ENST00000393952 A0A1W2PQ27 194 aa27.49■■□□□ 1.99
LRFN4-202ENST00000393952 A0A1W2PQ64 194 aa27.49■■□□□ 1.99
LRFN4-202ENST00000393952 A0A1W2PQD8 194 aa27.49■■□□□ 1.99
LRFN4-202ENST00000393952 CCND2P30279 289 aa27.49■■□□□ 1.99
LRFN4-202ENST00000393952 ALDH5A1P51649 535 aaPredicted RBP27.49■■□□□ 1.99
LRFN4-202ENST00000393952 PLEKHH3Q7Z736 793 aa27.49■■□□□ 1.99
LRFN4-202ENST00000393952 HAS1Q92839 578 aa27.49■■□□□ 1.99
LRFN4-202ENST00000393952 CSRNP2Q9H175 543 aa27.49■■□□□ 1.99
LRFN4-202ENST00000393952 ECM2O94769 699 aaPredicted RBP27.48■■□□□ 1.99
LRFN4-202ENST00000393952 ITGB5P18084 799 aa27.48■■□□□ 1.99
LRFN4-202ENST00000393952 XRRA1Q6P2D8 792 aa27.48■■□□□ 1.99
LRFN4-202ENST00000393952 SHC4Q6S5L8 630 aa27.48■■□□□ 1.99
LRFN4-202ENST00000393952 DTHD1Q6ZMT9 781 aa27.48■■□□□ 1.99
LRFN4-202ENST00000393952 VSIG10LQ86VR7 867 aa27.48■■□□□ 1.99
LRFN4-202ENST00000393952 PLA2G4DQ86XP0 818 aa27.48■■□□□ 1.99
LRFN4-202ENST00000393952 ABRAQ8N0Z2 381 aa27.48■■□□□ 1.99
LRFN4-202ENST00000393952 GJA10Q969M2 543 aa27.48■■□□□ 1.99
LRFN4-202ENST00000393952 FGD4Q96M96 766 aa27.48■■□□□ 1.99
LRFN4-202ENST00000393952 MXRA8Q9BRK3 442 aa27.48■■□□□ 1.99
LRFN4-202ENST00000393952 KCNMB3Q9NPA1 279 aa27.48■■□□□ 1.99
LRFN4-202ENST00000393952 ADD3Q9UEY8 706 aaKnown RBP27.48■■□□□ 1.99
LRFN4-202ENST00000393952 UBIAD1Q9Y5Z9 338 aa27.48■■□□□ 1.99
LRFN4-202ENST00000393952 THSD7BQ9C0I4 1608 aa27.48■■□□□ 1.99
LRFN4-202ENST00000393952 MEIS1O00470 390 aa27.48■■□□□ 1.99
LRFN4-202ENST00000393952 STRNO43815 780 aa27.48■■□□□ 1.99
LRFN4-202ENST00000393952 TRAK2O60296 914 aa27.48■■□□□ 1.99
LRFN4-202ENST00000393952 ADORA2AP29274 412 aa27.48■■□□□ 1.99
LRFN4-202ENST00000393952 TXKP42681 527 aa27.48■■□□□ 1.99
LRFN4-202ENST00000393952 SPECC1Q5M775 1068 aa27.48■■□□□ 1.99
LRFN4-202ENST00000393952 FSIP1Q8NA03 581 aa27.48■■□□□ 1.99
LRFN4-202ENST00000393952 ETNPPLQ8TBG4 499 aa27.48■■□□□ 1.99
LRFN4-202ENST00000393952 PLXNA1Q9UIW2 1896 aa27.47■■□□□ 1.99
LRFN4-202ENST00000393952 MSH4O15457 936 aa27.47■■□□□ 1.99
LRFN4-202ENST00000393952 MARCH6O60337 910 aa27.47■■□□□ 1.99
LRFN4-202ENST00000393952 MBD3O95983 291 aa27.47■■□□□ 1.99
LRFN4-202ENST00000393952 CMA1P23946 247 aa27.47■■□□□ 1.99
LRFN4-202ENST00000393952 ZNF579Q8NAF0 562 aaKnown RBP27.47■■□□□ 1.99
LRFN4-202ENST00000393952 MRPS27Q92552 414 aaKnown RBP27.47■■□□□ 1.99
LRFN4-202ENST00000393952 IWS1Q96ST2 819 aa27.47■■□□□ 1.99
LRFN4-202ENST00000393952 GOLPH3LQ9H4A5 285 aa27.47■■□□□ 1.99
LRFN4-202ENST00000393952 LIG1P18858 919 aa27.46■■□□□ 1.99
LRFN4-202ENST00000393952 GRB14Q14449 540 aa27.46■■□□□ 1.99
LRFN4-202ENST00000393952 RESP18Q5W5W9 173 aa27.46■■□□□ 1.99
LRFN4-202ENST00000393952 DOCK3Q8IZD9 2030 aa27.45■■□□□ 1.99
LRFN4-202ENST00000393952 TBX3O15119 743 aa27.45■■□□□ 1.99
LRFN4-202ENST00000393952 COBLO75128 1261 aa27.45■■□□□ 1.99
LRFN4-202ENST00000393952 ARP10275 920 aa27.45■■□□□ 1.99
LRFN4-202ENST00000393952 SETQ01105 290 aaPredicted RBP27.45■■□□□ 1.99
LRFN4-202ENST00000393952 NIPA1Q7RTP0 329 aa27.45■■□□□ 1.99
LRFN4-202ENST00000393952 WDR11Q9BZH6 1224 aa27.45■■□□□ 1.99
LRFN4-202ENST00000393952 JADE2Q9NQC1 790 aa27.45■■□□□ 1.99
LRFN4-202ENST00000393952 ZNF236Q9UL36 1845 aa27.45■■□□□ 1.98
LRFN4-202ENST00000393952 LRRC37A2A6NM11 1700 aa27.45■■□□□ 1.98
LRFN4-202ENST00000393952 A0A1B0GVL5 298 aa27.44■■□□□ 1.98
LRFN4-202ENST00000393952 TBC1D8O95759 1140 aa27.44■■□□□ 1.98
LRFN4-202ENST00000393952 TECP42680 631 aa27.44■■□□□ 1.98
LRFN4-202ENST00000393952 SKOR2Q2VWA4 1001 aaPredicted RBP27.44■■□□□ 1.98
LRFN4-202ENST00000393952 USP49Q70CQ1 688 aa27.44■■□□□ 1.98
LRFN4-202ENST00000393952 SLC15A5A6NIM6 579 aa27.43■■□□□ 1.98
LRFN4-202ENST00000393952 EDNRBP24530 442 aa27.43■■□□□ 1.98
LRFN4-202ENST00000393952 LONP1P36776 959 aaKnown RBP27.43■■□□□ 1.98
LRFN4-202ENST00000393952 KLHL40Q2TBA0 621 aa27.43■■□□□ 1.98
LRFN4-202ENST00000393952 ZNF792Q3KQV3 632 aa27.43■■□□□ 1.98
LRFN4-202ENST00000393952 SLFN12Q8IYM2 578 aa27.43■■□□□ 1.98
LRFN4-202ENST00000393952 FAM20AQ96MK3 541 aa27.43■■□□□ 1.98
LRFN4-202ENST00000393952 TTC12Q9H892 705 aaPredicted RBP27.43■■□□□ 1.98
LRFN4-202ENST00000393952 KIAA1217Q5T5P2 1943 aa27.43■■□□□ 1.98
LRFN4-202ENST00000393952 PFKFB1P16118 471 aa27.43■■□□□ 1.98
LRFN4-202ENST00000393952 FXR2P51116 673 aaKnown RBP eCLIP27.43■■□□□ 1.98
LRFN4-202ENST00000393952 STXBP2Q15833 593 aa27.43■■□□□ 1.98
LRFN4-202ENST00000393952 CCDC73Q6ZRK6 1079 aa27.43■■□□□ 1.98
LRFN4-202ENST00000393952 RNF186Q9NXI6 227 aa27.43■■□□□ 1.98
LRFN4-202ENST00000393952 MCM3APO60318 1980 aa27.43■■□□□ 1.98
LRFN4-202ENST00000393952 MGAMO43451 1857 aa27.42■■□□□ 1.98
LRFN4-202ENST00000393952 TRPA1O75762 1119 aa27.42■■□□□ 1.98
LRFN4-202ENST00000393952 PDE4DQ08499 809 aa27.42■■□□□ 1.98
LRFN4-202ENST00000393952 MTMR1Q13613 665 aa27.42■■□□□ 1.98
LRFN4-202ENST00000393952 TMEM266Q2M3C6 531 aa27.42■■□□□ 1.98
LRFN4-202ENST00000393952 SYMPKQ92797 1274 aaKnown RBP27.42■■□□□ 1.98
LRFN4-202ENST00000393952 EPSTI1Q96J88 318 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms