RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 ABCD1P33897 745 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 TNNC1P63316 161 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 SLC10A5Q5PT55 438 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 FAM160B1Q5W0V3 765 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 HHIPL2Q6UWX4 724 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 ATG9AQ7Z3C6 839 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 DYDC1Q8WWB3 177 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 TRERF1Q96PN7 1200 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 CCDC77Q9BR77 488 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 WDR11Q9BZH6 1224 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 MRPL44Q9H9J2 332 aaKnown RBP7.76□□□□□ -1.17
RAB5B-201ENST00000360299 RNF146Q9NTX7 359 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 MTUS1Q9ULD2 1270 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 ZNF142P52746 1687 aaPredicted RBP7.76□□□□□ -1.17
RAB5B-201ENST00000360299 WNT10BO00744 389 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 ZBTB24O43167 697 aaPredicted RBP7.76□□□□□ -1.17
RAB5B-201ENST00000360299 EXOC3O60645 756 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 ZSCAN20P17040 1043 aaPredicted RBP7.76□□□□□ -1.17
RAB5B-201ENST00000360299 TNFAIP3P21580 790 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 CCND2P30279 289 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 ARID5AQ03989 594 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 ORC2Q13416 577 aaPredicted RBP7.76□□□□□ -1.17
RAB5B-201ENST00000360299 RAPGEF1Q13905 1077 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 TAF3Q5VWG9 929 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 CCDC155Q8N6L0 562 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 SLC44A5Q8NCS7 719 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 CDHR1Q96JP9 859 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 APOL6Q9BWW8 343 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 IKBKBO14920 756 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 ATP2A1O14983 1001 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 HSF2BPO75031 334 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 N4BP1O75113 896 aaKnown RBP7.76□□□□□ -1.17
RAB5B-201ENST00000360299 ENTPD3O75355 529 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 TECP42680 631 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 TERF1P54274 439 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 FSTL1Q12841 308 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 PNOCQ13519 176 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 PKP1Q13835 747 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 DYMQ7RTS9 669 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 PPP1R9BQ96SB3 815 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 HTATIP2Q9BUP3 242 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 FAM107BQ9H098 131 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.76□□□□□ -1.17
RAB5B-201ENST00000360299 CLIC4Q9Y696 253 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 NFAT5O94916 1531 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 FSD2A1L4K1 749 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 CTNND1O60716 968 aaKnown RBP7.76□□□□□ -1.17
RAB5B-201ENST00000360299 EEF2P13639 858 aaKnown RBP7.76□□□□□ -1.17
RAB5B-201ENST00000360299 MARK3P27448 753 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 RESTQ13127 1097 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 BIRC3Q13489 604 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 COG2Q14746 738 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 ASIC2Q16515 512 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 PRR16Q569H4 304 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 KIAA1841Q6NSI8 718 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 CTR9Q6PD62 1173 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 RNF180Q86T96 592 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 PLA2G4DQ86XP0 818 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 CMTR1Q8N1G2 835 aaKnown RBP7.76□□□□□ -1.17
RAB5B-201ENST00000360299 GCNT3O95395 438 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 SLFN14P0C7P3 912 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 NFX1Q12986 1120 aaKnown RBP7.75□□□□□ -1.17
RAB5B-201ENST00000360299 GPBP1Q86WP2 473 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 TPH2Q8IWU9 490 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 GTF3C2Q8WUA4 911 aaPredicted RBP7.75□□□□□ -1.17
RAB5B-201ENST00000360299 SRPRBQ9Y5M8 271 aaKnown RBP7.75□□□□□ -1.17
RAB5B-201ENST00000360299 LTBP4Q8N2S1 1624 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 OPA1O60313 960 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 NDUFA8P51970 172 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 SMC1AQ14683 1233 aaKnown RBP7.75□□□□□ -1.17
RAB5B-201ENST00000360299 SGMS1Q86VZ5 419 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 OR8K1Q8NGG5 319 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 GPT2Q8TD30 523 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 GPKOWQ92917 476 aaPredicted RBP eCLIP7.75□□□□□ -1.17
RAB5B-201ENST00000360299 OSBPL5Q9H0X9 879 aaPredicted RBP7.75□□□□□ -1.17
RAB5B-201ENST00000360299 TMX1Q9H3N1 280 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 LZTFL1Q9NQ48 299 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 MAPK8IP1Q9UQF2 711 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 PNMA6FA0A0J9YX94 578 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 ORC4O43929 436 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 EVI5O60447 810 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 AOC2O75106 756 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 RPN1P04843 607 aaKnown RBP7.75□□□□□ -1.17
RAB5B-201ENST00000360299 VAV2P52735 878 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 INHBEP58166 350 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 SEMA3FQ13275 785 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 MICALCLQ6ZW33 695 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 DCAF4Q8WV16 495 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 DHTKD1Q96HY7 919 aaPredicted RBP7.75□□□□□ -1.17
RAB5B-201ENST00000360299 NOX5Q96PH1 765 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 STMN4Q9H169 189 aaPredicted RBP7.75□□□□□ -1.17
RAB5B-201ENST00000360299 FEM1BQ9UK73 627 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 INPP5BP32019 993 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 COPB2P35606 906 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 SYT10Q6XYQ8 523 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 CEP128Q6ZU80 1094 aa7.75□□□□□ -1.17
RAB5B-201ENST00000360299 TDRD7Q8NHU6 1098 aaKnown RBP7.75□□□□□ -1.17
RAB5B-201ENST00000360299 ZC3H15Q8WU90 426 aaKnown RBP7.75□□□□□ -1.17
RAB5B-201ENST00000360299 SYMPKQ92797 1274 aaKnown RBP7.75□□□□□ -1.17
RAB5B-201ENST00000360299 NAPGQ99747 312 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms