RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 BNIP3LO60238 219 aa18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 ZNF589Q86UQ0 364 aaPredicted RBP18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 ORAI2Q96SN7 254 aa18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 ABCB6Q9NP58 842 aa18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 SCHIP1Q9P0W5 487 aaPredicted RBP18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 PI4K2BG5E9Z4 385 aa18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 KRT1P04264 644 aa18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 POLR2MP0CAP2 368 aa18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 ATP5JP18859 108 aa18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 CDR2Q01850 454 aa18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 PDCD2Q16342 344 aaPredicted RBP18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 ZNF274Q96GC6 653 aaPredicted RBP18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 SMYD3Q9H7B4 428 aa18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 SFMBT1Q9UHJ3 866 aa18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 CPP00450 1065 aa18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 DYNLL1P63167 89 aaKnown RBP18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 DLGAP5Q15398 846 aa18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 PI4K2BQ8TCG2 481 aa18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 EPC1Q9H2F5 836 aa18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 RNF8O76064 485 aa18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 FAM149B1Q96BN6 582 aa18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 CALN1Q9BXU9 219 aa18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 MROH5Q6ZUA9 1318 aa18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 PPIP5K2O43314 1243 aa18.24■□□□□ 0.51
TSPAN3-201ENST00000267970 H0YIN7 160 aa18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 BTDP43251 543 aa18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 NR5A1Q13285 461 aa18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 CDO1Q16878 200 aa18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 DARS2Q6PI48 645 aaKnown RBP18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 UBE2TQ9NPD8 197 aaPredicted RBP18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 UBN1Q9NPG3 1134 aa18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 ATP8A2Q9NTI2 1148 aa18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 AOX1Q06278 1338 aa18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 GOLGA8IPA6NC78 632 aa18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 GOLGA8JA6NMD2 632 aa18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 PDE6AP16499 860 aa18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 EEF1DP29692 281 aaKnown RBP18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 POLD4Q9HCU8 107 aa18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 HESX1Q9UBX0 185 aa18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 FBXO11Q86XK2 927 aa18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 LZTS2Q9BRK4 669 aa18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 CCDC195A0A1B0GUA6 201 aa18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 HSPH1Q92598 858 aa18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 ELAC2Q9BQ52 826 aaKnown RBP18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 ZWILCHQ9H900 591 aa18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 GOLGA8MH3BSY2 632 aa18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 MYO1FO00160 1098 aa18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 SYF2O95926 243 aaKnown RBP18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 GUCY2CP25092 1073 aa18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 ANGPTL8Q6UXH0 198 aa18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 TEKT3Q9BXF9 490 aa18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 NHEJ1Q9H9Q4 299 aaPredicted RBP18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 NXF1Q9UBU9 619 aaKnown RBP18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 NFU1Q9UMS0 254 aa18.23■□□□□ 0.51
TSPAN3-201ENST00000267970 CLRN2A0PK11 232 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 TRAPPC10P48553 1259 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 AIFM3Q96NN9 605 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 CCDC87Q9NVE4 849 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 SFI1A8K8P3 1242 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 HNRNPH2P55795 449 aaKnown RBP18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 EEPD1Q7L9B9 569 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 ZBTB8OSQ8IWT0 167 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 TRPM2O94759 1503 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 KCNA6P17658 529 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 YWHAEP62258 255 aaKnown RBP18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 GRAMD1BQ3KR37 738 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 CERKLQ49MI3 558 aaPredicted RBP18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 CHL1O00533 1208 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 HNRNPDLO14979 420 aaKnown RBP18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 MAP3K7O43318 606 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 SPOPLQ6IQ16 392 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 ANKRD35Q8N283 1001 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 GINM1Q9NU53 330 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 S100BP04271 92 aaPredicted RBP18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 DDIT3P35638 169 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 EIF4A3P38919 411 aaKnown RBP18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 IQCB1Q15051 598 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 ANKRD20A4Q4UJ75 823 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 ANKRD20A8PQ5CZ79 823 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 ANKRD20A2Q5SQ80 823 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 ANKRD20A1Q5TYW2 823 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 FBXO41Q8TF61 875 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 DEPDC1BQ8WUY9 529 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 CDKL2Q92772 493 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 SUFUQ9UMX1 484 aa18.22■□□□□ 0.51
TSPAN3-201ENST00000267970 CASP1P29466 404 aa18.21■□□□□ 0.51
TSPAN3-201ENST00000267970 RABGGTAQ92696 567 aa18.21■□□□□ 0.51
TSPAN3-201ENST00000267970 COA7Q96BR5 231 aa18.21■□□□□ 0.51
TSPAN3-201ENST00000267970 FAM167BQ9BTA0 163 aa18.21■□□□□ 0.51
TSPAN3-201ENST00000267970 PARP10Q53GL7 1025 aa18.21■□□□□ 0.51
TSPAN3-201ENST00000267970 KCTD6Q8NC69 237 aa18.21■□□□□ 0.51
TSPAN3-201ENST00000267970 GLT8D2Q9H1C3 349 aa18.21■□□□□ 0.51
TSPAN3-201ENST00000267970 ZMYM4Q5VZL5 1548 aa18.21■□□□□ 0.51
TSPAN3-201ENST00000267970 PHKA1P46020 1223 aa18.21■□□□□ 0.51
TSPAN3-201ENST00000267970 ART3Q13508 389 aa18.21■□□□□ 0.51
TSPAN3-201ENST00000267970 MUM1L1Q5H9M0 696 aa18.21■□□□□ 0.51
TSPAN3-201ENST00000267970 STK24Q9Y6E0 443 aa18.21■□□□□ 0.51
TSPAN3-201ENST00000267970 LARGE1O95461 756 aa18.21■□□□□ 0.51
TSPAN3-201ENST00000267970 AKT3Q9Y243 479 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms