RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 HDAC7Q8WUI4 952 aa18.73■□□□□ 0.59
SSPN-201ENST00000242729 RAB21Q9UL25 225 aa18.73■□□□□ 0.59
SSPN-201ENST00000242729 AKR1B10O60218 316 aa18.73■□□□□ 0.59
SSPN-201ENST00000242729 KRT83P78385 493 aa18.73■□□□□ 0.59
SSPN-201ENST00000242729 GFPT1Q06210 699 aaPredicted RBP18.73■□□□□ 0.59
SSPN-201ENST00000242729 KIF5AQ12840 1032 aa18.73■□□□□ 0.59
SSPN-201ENST00000242729 MTMR9Q96QG7 549 aa18.73■□□□□ 0.59
SSPN-201ENST00000242729 IFIH1Q9BYX4 1025 aaKnown RBP18.73■□□□□ 0.59
SSPN-201ENST00000242729 USP40Q9NVE5 1235 aa18.73■□□□□ 0.59
SSPN-201ENST00000242729 UBAP1LF5GYI3 381 aa18.72■□□□□ 0.59
SSPN-201ENST00000242729 PSMD14O00487 310 aa18.72■□□□□ 0.59
SSPN-201ENST00000242729 RNASE9P60153 205 aaKnown RBP18.72■□□□□ 0.59
SSPN-201ENST00000242729 SPA17Q15506 151 aa18.72■□□□□ 0.59
SSPN-201ENST00000242729 VWA3BQ502W6 1294 aa18.72■□□□□ 0.59
SSPN-201ENST00000242729 NFRKBQ6P4R8 1299 aa18.72■□□□□ 0.59
SSPN-201ENST00000242729 CCDC66A2RUB6 948 aa18.72■□□□□ 0.59
SSPN-201ENST00000242729 MAPK8IP2Q13387 824 aaPredicted RBP18.72■□□□□ 0.59
SSPN-201ENST00000242729 TMEM266Q2M3C6 531 aa18.72■□□□□ 0.59
SSPN-201ENST00000242729 KRT79Q5XKE5 535 aa18.72■□□□□ 0.59
SSPN-201ENST00000242729 DDX25Q9UHL0 483 aaKnown RBP18.72■□□□□ 0.59
SSPN-201ENST00000242729 SALL4Q9UJQ4 1053 aa18.72■□□□□ 0.59
SSPN-201ENST00000242729 ATP8B1O43520 1251 aa18.71■□□□□ 0.59
SSPN-201ENST00000242729 DDR1Q08345 913 aa18.71■□□□□ 0.59
SSPN-201ENST00000242729 MEA1Q16626 185 aa18.71■□□□□ 0.59
SSPN-201ENST00000242729 TDRD12Q587J7 1177 aaKnown RBP18.71■□□□□ 0.59
SSPN-201ENST00000242729 SAMD1Q6SPF0 538 aaPredicted RBP18.71■□□□□ 0.59
SSPN-201ENST00000242729 SECISBP2LQ93073 1101 aaKnown RBP18.71■□□□□ 0.59
SSPN-201ENST00000242729 RIOX1Q9H6W3 641 aa18.71■□□□□ 0.59
SSPN-201ENST00000242729 DDX60LQ5H9U9 1706 aaKnown RBP18.71■□□□□ 0.59
SSPN-201ENST00000242729 TRAF5O00463 557 aa18.71■□□□□ 0.59
SSPN-201ENST00000242729 MEIS1O00470 390 aa18.71■□□□□ 0.59
SSPN-201ENST00000242729 IL1R1P14778 569 aa18.71■□□□□ 0.59
SSPN-201ENST00000242729 ATP2B4P23634 1241 aa18.71■□□□□ 0.59
SSPN-201ENST00000242729 BCAS3Q9H6U6 928 aa18.71■□□□□ 0.59
SSPN-201ENST00000242729 MYO1AQ9UBC5 1043 aa18.71■□□□□ 0.59
SSPN-201ENST00000242729 KIF11P52732 1056 aa18.7■□□□□ 0.58
SSPN-201ENST00000242729 RASSF7Q02833 373 aa18.7■□□□□ 0.58
SSPN-201ENST00000242729 PPARDQ03181 441 aa18.7■□□□□ 0.58
SSPN-201ENST00000242729 CACNA2D4Q7Z3S7 1137 aa18.7■□□□□ 0.58
SSPN-201ENST00000242729 RAD54LQ92698 747 aa18.7■□□□□ 0.58
SSPN-201ENST00000242729 RBM17Q96I25 401 aaKnown RBP18.7■□□□□ 0.58
SSPN-201ENST00000242729 KIAA1024Q9UPX6 916 aa18.7■□□□□ 0.58
SSPN-201ENST00000242729 POTEB3A0JP26 581 aa18.7■□□□□ 0.58
SSPN-201ENST00000242729 POTECB2RU33 542 aa18.7■□□□□ 0.58
SSPN-201ENST00000242729 CENPPQ6IPU0 288 aa18.7■□□□□ 0.58
SSPN-201ENST00000242729 POTEBQ6S5H4 581 aa18.7■□□□□ 0.58
SSPN-201ENST00000242729 FAM114A1Q8IWE2 563 aa18.7■□□□□ 0.58
SSPN-201ENST00000242729 HAS1Q92839 578 aa18.7■□□□□ 0.58
SSPN-201ENST00000242729 RABEP2Q9H5N1 569 aa18.7■□□□□ 0.58
SSPN-201ENST00000242729 PCDHA13Q9Y5I0 950 aa18.7■□□□□ 0.58
SSPN-201ENST00000242729 NAV1Q8NEY1 1877 aa18.7■□□□□ 0.58
SSPN-201ENST00000242729 SBF2Q86WG5 1849 aa18.7■□□□□ 0.58
SSPN-201ENST00000242729 TULP1O00294 542 aaPredicted RBP18.7■□□□□ 0.58
SSPN-201ENST00000242729 MYL1P05976 194 aa18.7■□□□□ 0.58
SSPN-201ENST00000242729 FOXR1Q6PIV2 292 aa18.7■□□□□ 0.58
SSPN-201ENST00000242729 CUEDC2Q9H467 287 aa18.7■□□□□ 0.58
SSPN-201ENST00000242729 BTAF1O14981 1849 aa18.69■□□□□ 0.58
SSPN-201ENST00000242729 ANKRD65E5RJM6 399 aa18.69■□□□□ 0.58
SSPN-201ENST00000242729 USP14P54578 494 aa18.69■□□□□ 0.58
SSPN-201ENST00000242729 USH1GQ495M9 461 aa18.69■□□□□ 0.58
SSPN-201ENST00000242729 CCDC40Q4G0X9 1142 aa18.69■□□□□ 0.58
SSPN-201ENST00000242729 UNC13DQ70J99 1090 aa18.69■□□□□ 0.58
SSPN-201ENST00000242729 SERPINB13Q9UIV8 391 aa18.69■□□□□ 0.58
SSPN-201ENST00000242729 SIK3Q9Y2K2 1263 aa18.69■□□□□ 0.58
SSPN-201ENST00000242729 EIF3CLB5ME19 914 aaKnown RBP18.69■□□□□ 0.58
SSPN-201ENST00000242729 G3V3G9 751 aa18.69■□□□□ 0.58
SSPN-201ENST00000242729 PLCG2P16885 1265 aa18.69■□□□□ 0.58
SSPN-201ENST00000242729 CAPN2P17655 700 aa18.69■□□□□ 0.58
SSPN-201ENST00000242729 RBM5P52756 815 aaKnown RBP eCLIP18.69■□□□□ 0.58
SSPN-201ENST00000242729 DCAF8Q5TAQ9 597 aa18.69■□□□□ 0.58
SSPN-201ENST00000242729 ZSCAN29Q8IWY8 852 aaPredicted RBP18.69■□□□□ 0.58
SSPN-201ENST00000242729 NOC3LQ8WTT2 800 aaKnown RBP18.69■□□□□ 0.58
SSPN-201ENST00000242729 MS4A14Q96JA4 679 aa18.69■□□□□ 0.58
SSPN-201ENST00000242729 EIF3CQ99613 913 aaKnown RBP18.69■□□□□ 0.58
SSPN-201ENST00000242729 PSTPIP2Q9H939 334 aa18.69■□□□□ 0.58
SSPN-201ENST00000242729 DBNDD1Q9H9R9 158 aa18.69■□□□□ 0.58
SSPN-201ENST00000242729 PCDHA12Q9UN75 941 aa18.69■□□□□ 0.58
SSPN-201ENST00000242729 SLC1A4P43007 532 aa18.68■□□□□ 0.58
SSPN-201ENST00000242729 HSP90B2PQ58FF3 399 aa18.68■□□□□ 0.58
SSPN-201ENST00000242729 KIAA0825Q8IV33 1275 aa18.68■□□□□ 0.58
SSPN-201ENST00000242729 HNRNPLLQ8WVV9 542 aaKnown RBP18.68■□□□□ 0.58
SSPN-201ENST00000242729 NUP58Q9BVL2 599 aa18.68■□□□□ 0.58
SSPN-201ENST00000242729 PACSIN2Q9UNF0 486 aaPredicted RBP18.68■□□□□ 0.58
SSPN-201ENST00000242729 MYH10P35580 1976 aa18.68■□□□□ 0.58
SSPN-201ENST00000242729 TTLL1O95922 423 aa18.68■□□□□ 0.58
SSPN-201ENST00000242729 VAV2P52735 878 aa18.68■□□□□ 0.58
SSPN-201ENST00000242729 COASYQ13057 564 aa18.68■□□□□ 0.58
SSPN-201ENST00000242729 ZSCAN26Q16670 478 aa18.68■□□□□ 0.58
SSPN-201ENST00000242729 PANK4Q9NVE7 773 aa18.68■□□□□ 0.58
SSPN-201ENST00000242729 POTEB2H3BUK9 544 aa18.67■□□□□ 0.58
SSPN-201ENST00000242729 TOM1O60784 492 aa18.67■□□□□ 0.58
SSPN-201ENST00000242729 ZNF543Q08ER8 600 aa18.67■□□□□ 0.58
SSPN-201ENST00000242729 ERGIC2Q96RQ1 377 aa18.67■□□□□ 0.58
SSPN-201ENST00000242729 POTEFA5A3E0 1075 aa18.67■□□□□ 0.58
SSPN-201ENST00000242729 POTEIP0CG38 1075 aa18.67■□□□□ 0.58
SSPN-201ENST00000242729 SHMT1P34896 483 aa18.67■□□□□ 0.58
SSPN-201ENST00000242729 IKQ13123 557 aaPredicted RBP18.67■□□□□ 0.58
SSPN-201ENST00000242729 GPS2Q13227 327 aa18.67■□□□□ 0.58
SSPN-201ENST00000242729 HERC4Q5GLZ8 1057 aaPredicted RBP18.67■□□□□ 0.58
SSPN-201ENST00000242729 PAPD7Q5XG87 772 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms