RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 EIF3JO75822 258 aaKnown RBP12.55□□□□□ -0.4
TNFAIP3-201ENST00000237289 NEDD9Q14511 834 aa12.55□□□□□ -0.4
TNFAIP3-201ENST00000237289 TRMT44Q8IYL2 757 aaKnown RBP12.55□□□□□ -0.4
TNFAIP3-201ENST00000237289 FSIP1Q8NA03 581 aa12.55□□□□□ -0.4
TNFAIP3-201ENST00000237289 MTMR8Q96EF0 704 aa12.55□□□□□ -0.4
TNFAIP3-201ENST00000237289 USP28Q96RU2 1077 aa12.55□□□□□ -0.4
TNFAIP3-201ENST00000237289 MORF4L1Q9UBU8 362 aa12.55□□□□□ -0.4
TNFAIP3-201ENST00000237289 YEATS4O95619 227 aa12.55□□□□□ -0.4
TNFAIP3-201ENST00000237289 MBD3O95983 291 aa12.55□□□□□ -0.4
TNFAIP3-201ENST00000237289 TRIM47Q96LD4 638 aa12.55□□□□□ -0.4
TNFAIP3-201ENST00000237289 WDR11Q9BZH6 1224 aa12.55□□□□□ -0.4
TNFAIP3-201ENST00000237289 PPP1R11O60927 126 aaPredicted RBP12.55□□□□□ -0.4
TNFAIP3-201ENST00000237289 CCT6AP40227 531 aaKnown RBP12.55□□□□□ -0.4
TNFAIP3-201ENST00000237289 TECP42680 631 aa12.55□□□□□ -0.4
TNFAIP3-201ENST00000237289 RESTQ13127 1097 aa12.55□□□□□ -0.4
TNFAIP3-201ENST00000237289 PXMP2Q9NR77 195 aa12.55□□□□□ -0.4
TNFAIP3-201ENST00000237289 STAM2O75886 525 aa12.55□□□□□ -0.4
TNFAIP3-201ENST00000237289 TYW1BQ6NUM6 668 aa12.55□□□□□ -0.4
TNFAIP3-201ENST00000237289 PDCD2LQ9BRP1 358 aa12.55□□□□□ -0.4
TNFAIP3-201ENST00000237289 ZEB2O60315 1214 aa12.54□□□□□ -0.4
TNFAIP3-201ENST00000237289 TXNP10599 105 aaKnown RBP12.54□□□□□ -0.4
TNFAIP3-201ENST00000237289 U2AF2P26368 475 aaKnown RBP eCLIP12.54□□□□□ -0.42e-16■■■■□ 24.9
TNFAIP3-201ENST00000237289 FLT3LGP49771 235 aa12.54□□□□□ -0.4
TNFAIP3-201ENST00000237289 L1TD1Q5T7N2 865 aaKnown RBP12.54□□□□□ -0.4
TNFAIP3-201ENST00000237289 SCFD2Q8WU76 684 aa12.54□□□□□ -0.4
TNFAIP3-201ENST00000237289 PCDHB6Q9Y5E3 794 aa12.54□□□□□ -0.4
TNFAIP3-201ENST00000237289 ALDH5A1P51649 535 aaPredicted RBP12.54□□□□□ -0.4
TNFAIP3-201ENST00000237289 TBC1D22BQ9NU19 505 aa12.54□□□□□ -0.4
TNFAIP3-201ENST00000237289 LACTBP83111 547 aaPredicted RBP12.54□□□□□ -0.4
TNFAIP3-201ENST00000237289 PPP4R3AQ6IN85 833 aa12.54□□□□□ -0.4
TNFAIP3-201ENST00000237289 APBA2Q99767 749 aa12.54□□□□□ -0.4
TNFAIP3-201ENST00000237289 TTC12Q9H892 705 aaPredicted RBP12.54□□□□□ -0.4
TNFAIP3-201ENST00000237289 MYH8P13535 1937 aa12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 FAM155AB1AL88 458 aaPredicted RBP12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 KIF28PB7ZC32 967 aa12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 PIK3CDO00329 1044 aa12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 MAFGO15525 162 aa12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 TDP2O95551 362 aa12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 UTP14CQ5TAP6 766 aaKnown RBP12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 ABRAQ8N0Z2 381 aa12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 SNX29Q8TEQ0 813 aa12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 SCLT1Q96NL6 688 aa12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 MAF1Q9H063 256 aa12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 CLIC4Q9Y696 253 aa12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 ADCY3O60266 1144 aa12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 ORC2Q13416 577 aaPredicted RBP12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 FAM20AQ96MK3 541 aa12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 MXRA8Q9BRK3 442 aa12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 DDX60LQ5H9U9 1706 aaKnown RBP12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 SREBF1P36956 1147 aa12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 CTCFP49711 727 aaPredicted RBP12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 AMPD3Q01432 767 aa12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 RRAGBQ5VZM2 374 aa12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 ARMCX2Q7L311 632 aa12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 IPO5O00410 1097 aaKnown RBP12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 MEIS2O14770 477 aa12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 CUTAO60888 179 aa12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 STAT6P42226 847 aa12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 C17orf99Q6UX52 265 aa12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 FAM184BQ9ULE4 1060 aa12.53□□□□□ -0.4
TNFAIP3-201ENST00000237289 ZNF536O15090 1300 aa12.52□□□□□ -0.4
TNFAIP3-201ENST00000237289 GNRH1P01148 92 aa12.52□□□□□ -0.4
TNFAIP3-201ENST00000237289 PGM5Q15124 567 aa12.52□□□□□ -0.4
TNFAIP3-201ENST00000237289 TMEM132AQ24JP5 1023 aa12.52□□□□□ -0.4
TNFAIP3-201ENST00000237289 SLC9C1Q4G0N8 1177 aa12.52□□□□□ -0.4
TNFAIP3-201ENST00000237289 FAM160B1Q5W0V3 765 aa12.52□□□□□ -0.4
TNFAIP3-201ENST00000237289 LEO1Q8WVC0 666 aaPredicted RBP12.52□□□□□ -0.4
TNFAIP3-201ENST00000237289 TINF2Q9BSI4 451 aa12.52□□□□□ -0.4
TNFAIP3-201ENST00000237289 POLR3EQ9NVU0 708 aa12.52□□□□□ -0.4
TNFAIP3-201ENST00000237289 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.52□□□□□ -0.4
TNFAIP3-201ENST00000237289 NOD1Q9Y239 953 aa12.52□□□□□ -0.4
TNFAIP3-201ENST00000237289 FAM205CA6NFA0 338 aa12.52□□□□□ -0.41
TNFAIP3-201ENST00000237289 PCNX4Q63HM2 1172 aa12.52□□□□□ -0.41
TNFAIP3-201ENST00000237289 MIS18BP1Q6P0N0 1132 aa12.52□□□□□ -0.41
TNFAIP3-201ENST00000237289 TPH2Q8IWU9 490 aa12.52□□□□□ -0.41
TNFAIP3-201ENST00000237289 CNNM3Q8NE01 707 aa12.52□□□□□ -0.41
TNFAIP3-201ENST00000237289 CLEC4DQ8WXI8 215 aa12.52□□□□□ -0.41
TNFAIP3-201ENST00000237289 MRPS27Q92552 414 aaKnown RBP12.52□□□□□ -0.41
TNFAIP3-201ENST00000237289 TMEM106CQ9BVX2 250 aa12.52□□□□□ -0.41
TNFAIP3-201ENST00000237289 ABHD16BQ9H3Z7 469 aa12.52□□□□□ -0.41
TNFAIP3-201ENST00000237289 SYKP43405 635 aa12.52□□□□□ -0.41
TNFAIP3-201ENST00000237289 PRMT2P55345 433 aa12.52□□□□□ -0.41
TNFAIP3-201ENST00000237289 LRRC27Q9C0I9 530 aa12.52□□□□□ -0.41
TNFAIP3-201ENST00000237289 ADAMTS5Q9UNA0 930 aa12.52□□□□□ -0.41
TNFAIP3-201ENST00000237289 LAMB1P07942 1786 aa12.52□□□□□ -0.41
TNFAIP3-201ENST00000237289 SLC39A14Q15043 492 aa12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 SLC35G1Q2M3R5 365 aa12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 FBXO16Q8IX29 292 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 GPRASP2Q96D09 838 aa12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 PLIN2Q99541 437 aa12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 RARBP10826 455 aa12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 MCM4P33991 863 aa12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 HSD17B4P51659 736 aa12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 UBE2HP62256 183 aa12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 ZNF296Q8WUU4 475 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 DYNC1LI2O43237 492 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 GGPS1O95749 300 aa12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 BCRP11274 1271 aa12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 CYP2C19P33261 490 aa12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 KRT76Q01546 638 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 172.7 ms