RNA–Protein interactions for RNA: ENST00000592385.5

HDAC5-211, Transcript of histone deacetylase 5, humanhuman

TSL 5

Gene HDAC5, Length 2,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-211ENST00000592385 MYMKA6NI61 221 aa17.03■□□□□ 0.32
HDAC5-211ENST00000592385 FGFR1OPO95684 399 aaKnown RBP17.03■□□□□ 0.32
HDAC5-211ENST00000592385 PPP4R3AQ6IN85 833 aa17.03■□□□□ 0.32
HDAC5-211ENST00000592385 KIAA1328Q86T90 577 aa17.03■□□□□ 0.32
HDAC5-211ENST00000592385 GUF1Q8N442 669 aaKnown RBP17.03■□□□□ 0.32
HDAC5-211ENST00000592385 COA7Q96BR5 231 aa17.03■□□□□ 0.32
HDAC5-211ENST00000592385 GBP3Q9H0R5 595 aa17.03■□□□□ 0.32
HDAC5-211ENST00000592385 NHEJ1Q9H9Q4 299 aaPredicted RBP17.03■□□□□ 0.32
HDAC5-211ENST00000592385 RIC8AQ9NPQ8 531 aa17.03■□□□□ 0.32
HDAC5-211ENST00000592385 TRIM10Q9UDY6 481 aa17.03■□□□□ 0.32
HDAC5-211ENST00000592385 SPATA31A6Q5VVP1 1343 aa17.03■□□□□ 0.32
HDAC5-211ENST00000592385 PNMA6FA0A0J9YX94 578 aa17.03■□□□□ 0.32
HDAC5-211ENST00000592385 SLC37A4O43826 429 aa17.03■□□□□ 0.32
HDAC5-211ENST00000592385 EDIL3O43854 480 aa17.03■□□□□ 0.32
HDAC5-211ENST00000592385 TTLL1O95922 423 aa17.03■□□□□ 0.32
HDAC5-211ENST00000592385 AKR1B1P15121 316 aa17.03■□□□□ 0.32
HDAC5-211ENST00000592385 OAS2P29728 719 aaKnown RBP17.03■□□□□ 0.32
HDAC5-211ENST00000592385 GTF2IP78347 998 aa17.03■□□□□ 0.32
HDAC5-211ENST00000592385 PAPD7Q5XG87 772 aaKnown RBP17.03■□□□□ 0.32
HDAC5-211ENST00000592385 COA1Q9GZY4 146 aa17.03■□□□□ 0.32
HDAC5-211ENST00000592385 SLC39A2Q9NP94 309 aa17.03■□□□□ 0.32
HDAC5-211ENST00000592385 HNRNPH3P31942 346 aaKnown RBP17.02■□□□□ 0.32
HDAC5-211ENST00000592385 CYP2C19P33261 490 aa17.02■□□□□ 0.32
HDAC5-211ENST00000592385 ZNF543Q08ER8 600 aa17.02■□□□□ 0.32
HDAC5-211ENST00000592385 MCM6Q14566 821 aa17.02■□□□□ 0.32
HDAC5-211ENST00000592385 HDXQ7Z353 690 aa17.02■□□□□ 0.32
HDAC5-211ENST00000592385 SP8Q8IXZ3 490 aa17.02■□□□□ 0.32
HDAC5-211ENST00000592385 LRRC47Q8N1G4 583 aaKnown RBP17.02■□□□□ 0.32
HDAC5-211ENST00000592385 RAD54LQ92698 747 aa17.02■□□□□ 0.32
HDAC5-211ENST00000592385 JAKMIP2Q96AA8 810 aa17.02■□□□□ 0.32
HDAC5-211ENST00000592385 GJD4Q96KN9 370 aaPredicted RBP17.02■□□□□ 0.32
HDAC5-211ENST00000592385 TDP2O95551 362 aa17.02■□□□□ 0.32
HDAC5-211ENST00000592385 LRRC63Q05C16 580 aa17.02■□□□□ 0.32
HDAC5-211ENST00000592385 PSMD2Q13200 908 aa17.02■□□□□ 0.32
HDAC5-211ENST00000592385 TMEM119Q4V9L6 283 aa17.02■□□□□ 0.32
HDAC5-211ENST00000592385 TAF3Q5VWG9 929 aa17.02■□□□□ 0.32
HDAC5-211ENST00000592385 KRT79Q5XKE5 535 aa17.02■□□□□ 0.32
HDAC5-211ENST00000592385 DPP8Q6V1X1 898 aaPredicted RBP17.02■□□□□ 0.32
HDAC5-211ENST00000592385 PCMTD1Q96MG8 357 aaPredicted RBP17.02■□□□□ 0.32
HDAC5-211ENST00000592385 GREB1LQ9C091 1923 aaPredicted RBP17.02■□□□□ 0.31
HDAC5-211ENST00000592385 KLK7P49862 253 aa17.01■□□□□ 0.31
HDAC5-211ENST00000592385 PICALMQ13492 652 aa17.01■□□□□ 0.31
HDAC5-211ENST00000592385 VWA3BQ502W6 1294 aa17.01■□□□□ 0.31
HDAC5-211ENST00000592385 EEF2KMTQ96G04 330 aa17.01■□□□□ 0.31
HDAC5-211ENST00000592385 JMJD4Q9H9V9 463 aa17.01■□□□□ 0.31
HDAC5-211ENST00000592385 SERPINB13Q9UIV8 391 aa17.01■□□□□ 0.31
HDAC5-211ENST00000592385 SAR1BQ9Y6B6 198 aa17.01■□□□□ 0.31
HDAC5-211ENST00000592385 TFRCP02786 760 aaKnown RBP17.01■□□□□ 0.31
HDAC5-211ENST00000592385 CLK2P49760 499 aaKnown RBP17.01■□□□□ 0.31
HDAC5-211ENST00000592385 EHHADHQ08426 723 aa17.01■□□□□ 0.31
HDAC5-211ENST00000592385 HPS3Q969F9 1004 aa17.01■□□□□ 0.31
HDAC5-211ENST00000592385 RPGRIP1Q96KN7 1286 aa17.01■□□□□ 0.31
HDAC5-211ENST00000592385 PURBQ96QR8 312 aaKnown RBP17.01■□□□□ 0.31
HDAC5-211ENST00000592385 TSGA10Q9BZW7 698 aa17.01■□□□□ 0.31
HDAC5-211ENST00000592385 L1RE1Q9UN81 338 aa17.01■□□□□ 0.31
HDAC5-211ENST00000592385 ANO9A1A5B4 782 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 CCDC66A2RUB6 948 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 POLR3GO15318 223 aaPredicted RBP17■□□□□ 0.31
HDAC5-211ENST00000592385 SEPT2Q15019 361 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 MAN2A1Q16706 1144 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 GPATCH4Q5T3I0 446 aaKnown RBP17■□□□□ 0.31
HDAC5-211ENST00000592385 NCAPH2Q6IBW4 605 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 WDR93Q6P2C0 686 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 CCDC84Q86UT8 332 aaPredicted RBP17■□□□□ 0.31
HDAC5-211ENST00000592385 SNX29Q8TEQ0 813 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 GPCPD1Q9NPB8 672 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 ZKSCAN7Q9P0L1 754 aaPredicted RBP17■□□□□ 0.31
HDAC5-211ENST00000592385 PLAGL2Q9UPG8 496 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 MYH4Q9Y623 1939 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 POTEMA6NI47 508 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 ONECUT3O60422 494 aaPredicted RBP17■□□□□ 0.31
HDAC5-211ENST00000592385 RHOXF2BP0C7M4 288 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 DDR1Q08345 913 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 GPS2Q13227 327 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 ADGRF4Q8IZF3 695 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 CUL5Q93034 780 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 RHOXF2Q9BQY4 288 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 NDST4Q9H3R1 872 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 DDX4Q9NQI0 724 aaKnown RBP17■□□□□ 0.31
HDAC5-211ENST00000592385 SIK3Q9Y2K2 1263 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 MYH7BA7E2Y1 1941 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 POLRMTO00411 1230 aaKnown RBP17■□□□□ 0.31
HDAC5-211ENST00000592385 PPEF1O14829 653 aaPredicted RBP17■□□□□ 0.31
HDAC5-211ENST00000592385 GCFC2P16383 781 aaKnown RBP17■□□□□ 0.31
HDAC5-211ENST00000592385 TNNI2P48788 182 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 VAV2P52735 878 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 MRPL12P52815 198 aaKnown RBP17■□□□□ 0.31
HDAC5-211ENST00000592385 VSNL1P62760 191 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 NOA1Q8NC60 698 aaKnown RBP17■□□□□ 0.31
HDAC5-211ENST00000592385 ABCB6Q9NP58 842 aa17■□□□□ 0.31
HDAC5-211ENST00000592385 UBAP1LF5GYI3 381 aa16.99■□□□□ 0.31
HDAC5-211ENST00000592385 ATP1A1P05023 1023 aaKnown RBP16.99■□□□□ 0.31
HDAC5-211ENST00000592385 CKAP4Q07065 602 aaKnown RBP16.99■□□□□ 0.31
HDAC5-211ENST00000592385 SLC27A3Q5K4L6 730 aa16.99■□□□□ 0.31
HDAC5-211ENST00000592385 MTMR8Q96EF0 704 aa16.99■□□□□ 0.31
HDAC5-211ENST00000592385 NAP1L4Q99733 375 aaKnown RBP16.99■□□□□ 0.31
HDAC5-211ENST00000592385 LACRTQ9GZZ8 138 aa16.99■□□□□ 0.31
HDAC5-211ENST00000592385 ATP6V0A2Q9Y487 856 aa16.99■□□□□ 0.31
HDAC5-211ENST00000592385 SHMT1P34896 483 aa16.99■□□□□ 0.31
HDAC5-211ENST00000592385 SPA17Q15506 151 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms