RNA–Protein interactions for RNA: ENST00000588749.1

CACTIN-206, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 3

Gene CACTIN, Length 391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-206ENST00000588749 PRO3102Q9H379 93 aa16.78■□□□□ 0.28
CACTIN-206ENST00000588749 SEC63Q9UGP8 760 aaKnown RBP16.78■□□□□ 0.28
CACTIN-206ENST00000588749 SNX14Q9Y5W7 946 aa16.78■□□□□ 0.28
CACTIN-206ENST00000588749 RBM47A0AV96 593 aaKnown RBP16.77■□□□□ 0.28
CACTIN-206ENST00000588749 HMGB1P09429 215 aaKnown RBP16.77■□□□□ 0.28
CACTIN-206ENST00000588749 CPA1P15085 419 aa16.77■□□□□ 0.28
CACTIN-206ENST00000588749 SMARCA1P28370 1054 aa16.77■□□□□ 0.28
CACTIN-206ENST00000588749 HOXA13P31271 388 aaPredicted RBP16.77■□□□□ 0.28
CACTIN-206ENST00000588749 MAGEA10P43363 369 aaPredicted RBP16.77■□□□□ 0.28
CACTIN-206ENST00000588749 NKX3-2P78367 333 aa16.77■□□□□ 0.28
CACTIN-206ENST00000588749 GHRHRQ02643 423 aa16.77■□□□□ 0.28
CACTIN-206ENST00000588749 TLE2Q04725 743 aa16.77■□□□□ 0.28
CACTIN-206ENST00000588749 PPP2R5BQ15173 497 aa16.77■□□□□ 0.28
CACTIN-206ENST00000588749 FSCN1Q16658 493 aaKnown RBP16.77■□□□□ 0.28
CACTIN-206ENST00000588749 C1orf53Q5VUE5 145 aa16.77■□□□□ 0.28
CACTIN-206ENST00000588749 ARHGEF16Q5VV41 709 aa16.77■□□□□ 0.28
CACTIN-206ENST00000588749 FANCBQ8NB91 859 aa16.77■□□□□ 0.28
CACTIN-206ENST00000588749 SCFD2Q8WU76 684 aa16.77■□□□□ 0.28
CACTIN-206ENST00000588749 JAKMIP1Q96N16 626 aaKnown RBP16.77■□□□□ 0.28
CACTIN-206ENST00000588749 PRDM5Q9NQX1 630 aaPredicted RBP16.77■□□□□ 0.28
CACTIN-206ENST00000588749 PRKAG2Q9UGJ0 569 aa16.77■□□□□ 0.28
CACTIN-206ENST00000588749 GCOM1H8Y6P7 765 aaPredicted RBP16.76■□□□□ 0.27
CACTIN-206ENST00000588749 PQBP1O60828 265 aaKnown RBP16.76■□□□□ 0.27
CACTIN-206ENST00000588749 SLC34A2O95436 690 aa16.76■□□□□ 0.27
CACTIN-206ENST00000588749 POLR2MP0CAP2 368 aa16.76■□□□□ 0.27
CACTIN-206ENST00000588749 FGD1P98174 961 aa16.76■□□□□ 0.27
CACTIN-206ENST00000588749 TMTC3Q6ZXV5 915 aa16.76■□□□□ 0.27
CACTIN-206ENST00000588749 CCDC82Q8N4S0 544 aa16.76■□□□□ 0.27
CACTIN-206ENST00000588749 VTI1AQ96AJ9 217 aa16.76■□□□□ 0.27
CACTIN-206ENST00000588749 IWS1Q96ST2 819 aa16.76■□□□□ 0.27
CACTIN-206ENST00000588749 GDF15Q99988 308 aa16.76■□□□□ 0.27
CACTIN-206ENST00000588749 PXMP2Q9NR77 195 aa16.76■□□□□ 0.27
CACTIN-206ENST00000588749 BRPF3Q9ULD4 1205 aa16.76■□□□□ 0.27
CACTIN-206ENST00000588749 Q9Y3F1 56 aa16.76■□□□□ 0.27
CACTIN-206ENST00000588749 KIAA1217Q5T5P2 1943 aa16.76■□□□□ 0.27
CACTIN-206ENST00000588749 ELP1O95163 1332 aa16.75■□□□□ 0.27
CACTIN-206ENST00000588749 KLF18A0A0U1RQI7 1052 aa16.75■□□□□ 0.27
CACTIN-206ENST00000588749 ZBTB43O43298 467 aa16.75■□□□□ 0.27
CACTIN-206ENST00000588749 MDM2Q00987 491 aaPredicted RBP16.75■□□□□ 0.27
CACTIN-206ENST00000588749 STXBP2Q15833 593 aa16.75■□□□□ 0.27
CACTIN-206ENST00000588749 BLOC1S2Q6QNY1 142 aa16.75■□□□□ 0.27
CACTIN-206ENST00000588749 CXCL17Q6UXB2 119 aa16.75■□□□□ 0.27
CACTIN-206ENST00000588749 FCHSD1Q86WN1 690 aa16.75■□□□□ 0.27
CACTIN-206ENST00000588749 SAMD3Q8N6K7 520 aa16.75■□□□□ 0.27
CACTIN-206ENST00000588749 OR6J1Q8NGC5 347 aa16.75■□□□□ 0.27
CACTIN-206ENST00000588749 PDLIM7Q9NR12 457 aa16.75■□□□□ 0.27
CACTIN-206ENST00000588749 MAP3K20Q9NYL2 800 aaKnown RBP16.75■□□□□ 0.27
CACTIN-206ENST00000588749 NAP1L2Q9ULW6 460 aaPredicted RBP16.75■□□□□ 0.27
CACTIN-206ENST00000588749 LTBP2Q14767 1821 aa16.75■□□□□ 0.27
CACTIN-206ENST00000588749 hCG_1642624A0A1W2PR95 340 aa16.74■□□□□ 0.27
CACTIN-206ENST00000588749 ZEB2O60315 1214 aa16.74■□□□□ 0.27
CACTIN-206ENST00000588749 NR3C2P08235 984 aa16.74■□□□□ 0.27
CACTIN-206ENST00000588749 TXNP10599 105 aaKnown RBP16.74■□□□□ 0.27
CACTIN-206ENST00000588749 TTLL4Q14679 1199 aa16.74■□□□□ 0.27
CACTIN-206ENST00000588749 RTN1Q16799 776 aa16.74■□□□□ 0.27
CACTIN-206ENST00000588749 SEPT14Q6ZU15 432 aa16.74■□□□□ 0.27
CACTIN-206ENST00000588749 LBHD1Q9BQE6 289 aaPredicted RBP16.74■□□□□ 0.27
CACTIN-206ENST00000588749 PDCD2LQ9BRP1 358 aa16.74■□□□□ 0.27
CACTIN-206ENST00000588749 A0A0U1RQG5 324 aaPredicted RBP16.73■□□□□ 0.27
CACTIN-206ENST00000588749 GOLGA8AA7E2F4 631 aa16.73■□□□□ 0.27
CACTIN-206ENST00000588749 GOLGA8BA8MQT2 603 aa16.73■□□□□ 0.27
CACTIN-206ENST00000588749 NKRFO15226 690 aaKnown RBP eCLIP16.73■□□□□ 0.27
CACTIN-206ENST00000588749 ARIH2O95376 493 aa16.73■□□□□ 0.27
CACTIN-206ENST00000588749 CLTBP09497 229 aa16.73■□□□□ 0.27
CACTIN-206ENST00000588749 MYCLP12524 364 aaPredicted RBP16.73■□□□□ 0.27
CACTIN-206ENST00000588749 Q6ZUG5 572 aa16.73■□□□□ 0.27
CACTIN-206ENST00000588749 SH3RF1Q7Z6J0 888 aa16.73■□□□□ 0.27
CACTIN-206ENST00000588749 IL31RAQ8NI17 732 aa16.73■□□□□ 0.27
CACTIN-206ENST00000588749 COPS5Q92905 334 aa16.73■□□□□ 0.27
CACTIN-206ENST00000588749 UBE2OQ9C0C9 1292 aaKnown RBP16.73■□□□□ 0.27
CACTIN-206ENST00000588749 RBM28Q9NW13 759 aaKnown RBP16.73■□□□□ 0.27
CACTIN-206ENST00000588749 CNTNAP5Q8WYK1 1306 aa16.72■□□□□ 0.27
CACTIN-206ENST00000588749 A0A1W2PPC1 479 aa16.72■□□□□ 0.27
CACTIN-206ENST00000588749 EPB41L2O43491 1005 aaKnown RBP16.72■□□□□ 0.27
CACTIN-206ENST00000588749 EIF3JO75822 258 aaKnown RBP16.72■□□□□ 0.27
CACTIN-206ENST00000588749 CABYRO75952 493 aa16.72■□□□□ 0.27
CACTIN-206ENST00000588749 CASTP20810 708 aaKnown RBP16.72■□□□□ 0.27
CACTIN-206ENST00000588749 RPS6KB1P23443 525 aa16.72■□□□□ 0.27
CACTIN-206ENST00000588749 PSMA5P28066 241 aa16.72■□□□□ 0.27
CACTIN-206ENST00000588749 BMP8BP34820 402 aa16.72■□□□□ 0.27
CACTIN-206ENST00000588749 CPT1AP50416 773 aa16.72■□□□□ 0.27
CACTIN-206ENST00000588749 APOBRQ0VD83 1088 aa16.72■□□□□ 0.27
CACTIN-206ENST00000588749 PGM5Q15124 567 aa16.72■□□□□ 0.27
CACTIN-206ENST00000588749 CCDC62Q6P9F0 684 aa16.72■□□□□ 0.27
CACTIN-206ENST00000588749 ANKRD33Q7Z3H0 272 aa16.72■□□□□ 0.27
CACTIN-206ENST00000588749 BRF1Q92994 677 aa16.72■□□□□ 0.27
CACTIN-206ENST00000588749 MROH7Q68CQ1 1323 aa16.71■□□□□ 0.27
CACTIN-206ENST00000588749 TRIM43BA6NCK2 446 aa16.71■□□□□ 0.27
CACTIN-206ENST00000588749 DCDC2CA8MYV0 355 aa16.71■□□□□ 0.27
CACTIN-206ENST00000588749 ARVCFO00192 962 aa16.71■□□□□ 0.27
CACTIN-206ENST00000588749 FXR1P51114 621 aaKnown RBP eCLIP16.71■□□□□ 0.27
CACTIN-206ENST00000588749 LY6KQ17RY6 165 aa16.71■□□□□ 0.27
CACTIN-206ENST00000588749 BRDTQ58F21 947 aaPredicted RBP16.71■□□□□ 0.27
CACTIN-206ENST00000588749 HEATR3Q7Z4Q2 680 aa16.71■□□□□ 0.27
CACTIN-206ENST00000588749 GPKOWQ92917 476 aaPredicted RBP eCLIP16.71■□□□□ 0.27
CACTIN-206ENST00000588749 CUL5Q93034 780 aa16.71■□□□□ 0.27
CACTIN-206ENST00000588749 TRIM43Q96BQ3 446 aaPredicted RBP16.71■□□□□ 0.27
CACTIN-206ENST00000588749 TOX2Q96NM4 488 aa16.71■□□□□ 0.27
CACTIN-206ENST00000588749 USP26Q9BXU7 913 aa16.71■□□□□ 0.27
CACTIN-206ENST00000588749 MRVI1Q9Y6F6 885 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms