RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.68□□□□□ -1.66
ZEB1-212ENST00000558655 Q6ZUG5 572 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 OTOP1Q7RTM1 612 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 ARMC9Q7Z3E5 817 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 ZSCAN29Q8IWY8 852 aaPredicted RBP4.68□□□□□ -1.66
ZEB1-212ENST00000558655 DCAF4Q8WV16 495 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 KHSRPQ92945 711 aaKnown RBP eCLIP4.68□□□□□ -1.666e-7■■■■□ 21.8
ZEB1-212ENST00000558655 MYCBPQ99417 103 aaPredicted RBP4.68□□□□□ -1.66
ZEB1-212ENST00000558655 ARPC5LQ9BPX5 153 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 LLPHQ9BRT6 129 aaKnown RBP4.68□□□□□ -1.66
ZEB1-212ENST00000558655 IER2Q9BTL4 223 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 BRINP2Q9C0B6 783 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 SH2D4AQ9H788 454 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 INCENPQ9NQS7 918 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 LIMCH1Q9UPQ0 1083 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 LCTP09848 1927 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 STK36Q9NRP7 1315 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 TSPY2A6NKD2 308 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 USP17L5A8MUK1 530 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 C19orf81C9J6K1 198 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 CXCL11O14625 94 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 PPP1R12BO60237 982 aaPredicted RBP4.67□□□□□ -1.66
ZEB1-212ENST00000558655 PTPRAP18433 802 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 PPATQ06203 517 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 TROAPQ12815 778 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 WTAPQ15007 396 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 EAPPQ56P03 285 aaPredicted RBP4.67□□□□□ -1.66
ZEB1-212ENST00000558655 TMEM67Q5HYA8 995 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 SYCP2LQ5T4T6 812 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 CAVIN1Q6NZI2 390 aaKnown RBP4.67□□□□□ -1.66
ZEB1-212ENST00000558655 APOA5Q6Q788 366 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 BTNL9Q6UXG8 535 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 ANP32BQ92688 251 aaKnown RBP4.67□□□□□ -1.66
ZEB1-212ENST00000558655 CEP95Q96GE4 821 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 BORCS6Q96GS4 357 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 INTS4Q96HW7 963 aaKnown RBP4.67□□□□□ -1.66
ZEB1-212ENST00000558655 TMEM47Q9BQJ4 181 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 LZTS2Q9BRK4 669 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 UBAC1Q9BSL1 405 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 AS3MTQ9HBK9 375 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 ZCCHC17Q9NP64 241 aaKnown RBP4.67□□□□□ -1.66
ZEB1-212ENST00000558655 CABP5Q9NP86 173 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 ANKFY1Q9P2R3 1169 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 SLC45A1Q9Y2W3 748 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 AFG3L2Q9Y4W6 797 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 LRRC37A2A6NM11 1700 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 MYPNQ86TC9 1320 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 IFIT3O14879 490 aaKnown RBP4.67□□□□□ -1.66
ZEB1-212ENST00000558655 RANBP6O60518 1105 aaKnown RBP4.67□□□□□ -1.66
ZEB1-212ENST00000558655 PRPF40AO75400 957 aaKnown RBP4.67□□□□□ -1.66
ZEB1-212ENST00000558655 BAG4O95429 457 aaKnown RBP4.67□□□□□ -1.66
ZEB1-212ENST00000558655 GH2P01242 217 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 ZBTB48P10074 688 aaPredicted RBP4.67□□□□□ -1.66
ZEB1-212ENST00000558655 PDIA3P30101 505 aaKnown RBP4.67□□□□□ -1.66
ZEB1-212ENST00000558655 FUT2Q10981 343 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 ST3GAL1Q11201 340 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 SEPT2Q15019 361 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 ASPRV1Q53RT3 343 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 FAM47AQ5JRC9 791 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 LCE2DQ5TA82 110 aaPredicted RBP4.67□□□□□ -1.66
ZEB1-212ENST00000558655 MAP1SQ66K74 1059 aaPredicted RBP4.67□□□□□ -1.66
ZEB1-212ENST00000558655 PPP1R18Q6NYC8 613 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 ERO1BQ86YB8 467 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 SMARCC2Q8TAQ2 1214 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 TSC1Q92574 1164 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 LPAR1Q92633 364 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 GTF3C6Q969F1 213 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 MTMR8Q96EF0 704 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 SEMA6BQ9H3T3 888 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 GBA2Q9HCG7 927 aaPredicted RBP4.67□□□□□ -1.66
ZEB1-212ENST00000558655 FAM217BQ9NTX9 383 aaPredicted RBP4.67□□□□□ -1.66
ZEB1-212ENST00000558655 RBM28Q9NW13 759 aaKnown RBP4.67□□□□□ -1.66
ZEB1-212ENST00000558655 ZDHHC9Q9Y397 364 aa4.67□□□□□ -1.66
ZEB1-212ENST00000558655 DDX49Q9Y6V7 483 aaKnown RBP4.67□□□□□ -1.66
ZEB1-212ENST00000558655 A0A0G2JLL6 359 aaPredicted RBP4.66□□□□□ -1.66
ZEB1-212ENST00000558655 ERICH2A1L162 156 aa4.66□□□□□ -1.66
ZEB1-212ENST00000558655 PRDM1O75626 825 aa4.66□□□□□ -1.66
ZEB1-212ENST00000558655 CELF2O95319 508 aaKnown RBP4.66□□□□□ -1.66
ZEB1-212ENST00000558655 EEF2P13639 858 aaKnown RBP4.66□□□□□ -1.66
ZEB1-212ENST00000558655 FOSL2P15408 326 aa4.66□□□□□ -1.66
ZEB1-212ENST00000558655 INPP5BP32019 993 aa4.66□□□□□ -1.66
ZEB1-212ENST00000558655 RFC5P40937 340 aa4.66□□□□□ -1.66
ZEB1-212ENST00000558655 GNAQP50148 359 aa4.66□□□□□ -1.66
ZEB1-212ENST00000558655 USP14P54578 494 aa4.66□□□□□ -1.66
ZEB1-212ENST00000558655 ICA1Q05084 483 aa4.66□□□□□ -1.66
ZEB1-212ENST00000558655 MOGSQ13724 837 aa4.66□□□□□ -1.66
ZEB1-212ENST00000558655 VGLL4Q14135 290 aa4.66□□□□□ -1.66
ZEB1-212ENST00000558655 IFIT1BQ5T764 474 aaKnown RBP4.66□□□□□ -1.66
ZEB1-212ENST00000558655 USP17L2Q6R6M4 530 aa4.66□□□□□ -1.66
ZEB1-212ENST00000558655 PRRT2Q7Z6L0 340 aaPredicted RBP4.66□□□□□ -1.66
ZEB1-212ENST00000558655 ZNF654Q8IZM8 581 aa4.66□□□□□ -1.66
ZEB1-212ENST00000558655 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.66□□□□□ -1.66
ZEB1-212ENST00000558655 STK32AQ8WU08 396 aa4.66□□□□□ -1.66
ZEB1-212ENST00000558655 WRNIP1Q96S55 665 aa4.66□□□□□ -1.66
ZEB1-212ENST00000558655 SPZ1Q9BXG8 430 aa4.66□□□□□ -1.66
ZEB1-212ENST00000558655 VCPKMTQ9H867 229 aa4.66□□□□□ -1.66
ZEB1-212ENST00000558655 GRPEL1Q9HAV7 217 aa4.66□□□□□ -1.66
ZEB1-212ENST00000558655 TMEM51Q9NW97 253 aa4.66□□□□□ -1.66
ZEB1-212ENST00000558655 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.66□□□□□ -1.66
ZEB1-212ENST00000558655 TPCN1Q9ULQ1 816 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms