RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 CABP7Q86V35 215 aa19.97■□□□□ 0.79
RAB40C-203ENST00000535977 JPH2Q9BR39 696 aaPredicted RBP19.97■□□□□ 0.79
RAB40C-203ENST00000535977 A0A0U1RQJ8 604 aa19.96■□□□□ 0.79
RAB40C-203ENST00000535977 BICDL2A1A5D9 508 aa19.96■□□□□ 0.79
RAB40C-203ENST00000535977 ATRIPQ8WXE1 791 aa19.96■□□□□ 0.79
RAB40C-203ENST00000535977 TAB2Q9NYJ8 693 aa19.96■□□□□ 0.79
RAB40C-203ENST00000535977 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.96■□□□□ 0.79
RAB40C-203ENST00000535977 UBXN1Q04323 297 aa19.96■□□□□ 0.79
RAB40C-203ENST00000535977 C7orf25Q9BPX7 421 aa19.96■□□□□ 0.79
RAB40C-203ENST00000535977 RIOX1Q9H6W3 641 aa19.96■□□□□ 0.79
RAB40C-203ENST00000535977 PLIN4Q96Q06 1357 aa19.96■□□□□ 0.79
RAB40C-203ENST00000535977 EBAG9O00559 213 aa19.96■□□□□ 0.79
RAB40C-203ENST00000535977 AARSP49588 968 aaKnown RBP eCLIP19.96■□□□□ 0.793e-8■■■■■ 29.1
RAB40C-203ENST00000535977 EGFL6Q8IUX8 553 aa19.96■□□□□ 0.79
RAB40C-203ENST00000535977 FAM114A1Q8IWE2 563 aa19.96■□□□□ 0.79
RAB40C-203ENST00000535977 CDK5RAP2Q96SN8 1893 aa19.96■□□□□ 0.79
RAB40C-203ENST00000535977 DDX60LQ5H9U9 1706 aaKnown RBP19.95■□□□□ 0.78
RAB40C-203ENST00000535977 LGALS16A8MUM7 142 aa19.95■□□□□ 0.78
RAB40C-203ENST00000535977 CCNT1O60563 726 aaKnown RBP19.95■□□□□ 0.78
RAB40C-203ENST00000535977 GOLGA8HP0CJ92 632 aa19.95■□□□□ 0.78
RAB40C-203ENST00000535977 GYS1P13807 737 aa19.95■□□□□ 0.78
RAB40C-203ENST00000535977 COBLL1Q53SF7 1204 aa19.95■□□□□ 0.78
RAB40C-203ENST00000535977 GBP6Q6ZN66 633 aa19.95■□□□□ 0.78
RAB40C-203ENST00000535977 DNM2P50570 870 aa19.95■□□□□ 0.78
RAB40C-203ENST00000535977 TSR1Q2NL82 804 aaKnown RBP19.95■□□□□ 0.78
RAB40C-203ENST00000535977 ASPRV1Q53RT3 343 aa19.95■□□□□ 0.78
RAB40C-203ENST00000535977 MB21D1Q8N884 522 aa19.95■□□□□ 0.78
RAB40C-203ENST00000535977 TBC1D16Q8TBP0 767 aa19.95■□□□□ 0.78
RAB40C-203ENST00000535977 CEP95Q96GE4 821 aa19.95■□□□□ 0.78
RAB40C-203ENST00000535977 MTMR7Q9Y216 660 aa19.95■□□□□ 0.78
RAB40C-203ENST00000535977 ONECUT3O60422 494 aaPredicted RBP19.94■□□□□ 0.78
RAB40C-203ENST00000535977 SHOX2O60902 331 aaPredicted RBP19.94■□□□□ 0.78
RAB40C-203ENST00000535977 KRT9P35527 623 aa19.94■□□□□ 0.78
RAB40C-203ENST00000535977 KIF4BQ2VIQ3 1234 aa19.94■□□□□ 0.78
RAB40C-203ENST00000535977 LETM2Q2VYF4 491 aa19.94■□□□□ 0.78
RAB40C-203ENST00000535977 IRF2BP1Q8IU81 584 aa19.94■□□□□ 0.78
RAB40C-203ENST00000535977 RIN2Q8WYP3 895 aaPredicted RBP19.94■□□□□ 0.78
RAB40C-203ENST00000535977 CALML4Q96GE6 196 aa19.94■□□□□ 0.78
RAB40C-203ENST00000535977 GPR101Q96P66 508 aaPredicted RBP19.94■□□□□ 0.78
RAB40C-203ENST00000535977 INPP5BP32019 993 aa19.94■□□□□ 0.78
RAB40C-203ENST00000535977 USP17L2Q6R6M4 530 aa19.94■□□□□ 0.78
RAB40C-203ENST00000535977 REXO1Q8N1G1 1221 aaKnown RBP19.94■□□□□ 0.78
RAB40C-203ENST00000535977 RETREG2Q8NC44 543 aa19.94■□□□□ 0.78
RAB40C-203ENST00000535977 OR8K1Q8NGG5 319 aa19.94■□□□□ 0.78
RAB40C-203ENST00000535977 TRIM47Q96LD4 638 aa19.94■□□□□ 0.78
RAB40C-203ENST00000535977 NUP58Q9BVL2 599 aa19.94■□□□□ 0.78
RAB40C-203ENST00000535977 PPP2R5AQ15172 486 aa19.93■□□□□ 0.78
RAB40C-203ENST00000535977 SLC27A3Q5K4L6 730 aa19.93■□□□□ 0.78
RAB40C-203ENST00000535977 NOA1Q8NC60 698 aaKnown RBP19.93■□□□□ 0.78
RAB40C-203ENST00000535977 EXOC1Q9NV70 894 aa19.93■□□□□ 0.78
RAB40C-203ENST00000535977 MYH1P12882 1939 aa19.93■□□□□ 0.78
RAB40C-203ENST00000535977 KLRG2A4D1S0 409 aaPredicted RBP19.93■□□□□ 0.78
RAB40C-203ENST00000535977 PP2D1A8MPX8 630 aa19.93■□□□□ 0.78
RAB40C-203ENST00000535977 PLCG1P19174 1290 aa19.93■□□□□ 0.78
RAB40C-203ENST00000535977 CCNE1P24864 410 aa19.93■□□□□ 0.78
RAB40C-203ENST00000535977 TXNRD1Q16881 649 aa19.93■□□□□ 0.78
RAB40C-203ENST00000535977 ZNF569Q5MCW4 686 aa19.93■□□□□ 0.78
RAB40C-203ENST00000535977 TTI2Q6NXR4 508 aa19.93■□□□□ 0.78
RAB40C-203ENST00000535977 POTEDQ86YR6 584 aa19.93■□□□□ 0.78
RAB40C-203ENST00000535977 PRPF38AQ8NAV1 312 aaKnown RBP19.93■□□□□ 0.78
RAB40C-203ENST00000535977 GIMAP7Q8NHV1 300 aa19.93■□□□□ 0.78
RAB40C-203ENST00000535977 IQCDQ96DY2 449 aa19.93■□□□□ 0.78
RAB40C-203ENST00000535977 RABEP2Q9H5N1 569 aa19.93■□□□□ 0.78
RAB40C-203ENST00000535977 VIPAS39Q9H9C1 493 aa19.93■□□□□ 0.78
RAB40C-203ENST00000535977 MAPK8IP1Q9UQF2 711 aa19.93■□□□□ 0.78
RAB40C-203ENST00000535977 MYO3BQ8WXR4 1341 aa19.92■□□□□ 0.78
RAB40C-203ENST00000535977 CTAGE15A4D2H0 777 aa19.92■□□□□ 0.78
RAB40C-203ENST00000535977 CTAGE9A4FU28 777 aa19.92■□□□□ 0.78
RAB40C-203ENST00000535977 C21orf2O43822 256 aa19.92■□□□□ 0.78
RAB40C-203ENST00000535977 CTAGE8P0CG41 777 aa19.92■□□□□ 0.78
RAB40C-203ENST00000535977 SETQ01105 290 aaPredicted RBP19.92■□□□□ 0.78
RAB40C-203ENST00000535977 CTAGE6Q86UF2 777 aa19.92■□□□□ 0.78
RAB40C-203ENST00000535977 CTAGE4Q8IX94 777 aa19.92■□□□□ 0.78
RAB40C-203ENST00000535977 ZNF507Q8TCN5 953 aa19.92■□□□□ 0.78
RAB40C-203ENST00000535977 RAB34Q9BZG1 259 aa19.92■□□□□ 0.78
RAB40C-203ENST00000535977 TRIM9Q9C026 710 aa19.92■□□□□ 0.78
RAB40C-203ENST00000535977 LUC7L2Q9Y383 392 aaKnown RBP19.92■□□□□ 0.78
RAB40C-203ENST00000535977 LRCH2Q5VUJ6 765 aa19.92■□□□□ 0.78
RAB40C-203ENST00000535977 CNNM4Q6P4Q7 775 aa19.92■□□□□ 0.78
RAB40C-203ENST00000535977 SP8Q8IXZ3 490 aa19.92■□□□□ 0.78
RAB40C-203ENST00000535977 CEP120Q8N960 986 aa19.92■□□□□ 0.78
RAB40C-203ENST00000535977 COA1Q9GZY4 146 aa19.92■□□□□ 0.78
RAB40C-203ENST00000535977 EHD4Q9H223 541 aa19.92■□□□□ 0.78
RAB40C-203ENST00000535977 LRRC4BQ9NT99 713 aa19.92■□□□□ 0.78
RAB40C-203ENST00000535977 MTMR4Q9NYA4 1195 aa19.92■□□□□ 0.78
RAB40C-203ENST00000535977 STK17AQ9UEE5 414 aa19.92■□□□□ 0.78
RAB40C-203ENST00000535977 POLLQ9UGP5 575 aa19.92■□□□□ 0.78
RAB40C-203ENST00000535977 CAPN11Q9UMQ6 739 aa19.92■□□□□ 0.78
RAB40C-203ENST00000535977 IRAK1P51617 712 aa19.91■□□□□ 0.78
RAB40C-203ENST00000535977 PPP1R18Q6NYC8 613 aa19.91■□□□□ 0.78
RAB40C-203ENST00000535977 TBCKQ8TEA7 893 aa19.91■□□□□ 0.78
RAB40C-203ENST00000535977 P2RX5Q93086 422 aa19.91■□□□□ 0.78
RAB40C-203ENST00000535977 PIGSQ96S52 555 aa19.91■□□□□ 0.78
RAB40C-203ENST00000535977 A1CFQ9NQ94 594 aaKnown RBP19.91■□□□□ 0.78
RAB40C-203ENST00000535977 SWAP70Q9UH65 585 aa19.91■□□□□ 0.78
RAB40C-203ENST00000535977 HPCAL4Q9UM19 191 aa19.91■□□□□ 0.78
RAB40C-203ENST00000535977 COBLO75128 1261 aa19.91■□□□□ 0.78
RAB40C-203ENST00000535977 PDHBP11177 359 aa19.91■□□□□ 0.78
RAB40C-203ENST00000535977 ERVK-24P63145 666 aa19.91■□□□□ 0.78
RAB40C-203ENST00000535977 DNAJC7Q99615 494 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms