RNA–Protein interactions for RNA: ENST00000531579.5

NXF1-210, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-210ENST00000531579 ADCYAP1R1P41586 468 aa17.21■□□□□ 0.35
NXF1-210ENST00000531579 TOB2Q14106 344 aaPredicted RBP17.21■□□□□ 0.35
NXF1-210ENST00000531579 ANKRD1Q15327 319 aa17.21■□□□□ 0.35
NXF1-210ENST00000531579 DUSP28Q4G0W2 176 aa17.21■□□□□ 0.35
NXF1-210ENST00000531579 FBXO16Q8IX29 292 aaPredicted RBP17.21■□□□□ 0.35
NXF1-210ENST00000531579 KLHDC9Q8NEP7 349 aa17.21■□□□□ 0.35
NXF1-210ENST00000531579 SCFD2Q8WU76 684 aa17.21■□□□□ 0.35
NXF1-210ENST00000531579 WDR11Q9BZH6 1224 aa17.21■□□□□ 0.35
NXF1-210ENST00000531579 UPF3BQ9BZI7 483 aaKnown RBP17.21■□□□□ 0.35
NXF1-210ENST00000531579 AP5M1Q9H0R1 490 aa17.21■□□□□ 0.35
NXF1-210ENST00000531579 UPF3AQ9H1J1 476 aaKnown RBP17.21■□□□□ 0.35
NXF1-210ENST00000531579 PSTPIP2Q9H939 334 aa17.21■□□□□ 0.35
NXF1-210ENST00000531579 PXMP2Q9NR77 195 aa17.21■□□□□ 0.35
NXF1-210ENST00000531579 PDGFCQ9NRA1 345 aa17.21■□□□□ 0.35
NXF1-210ENST00000531579 GNEQ9Y223 722 aaKnown RBP17.21■□□□□ 0.35
NXF1-210ENST00000531579 NID2Q14112 1375 aa17.2■□□□□ 0.34
NXF1-210ENST00000531579 MOXD2PA6NHM9 499 aa17.2■□□□□ 0.34
NXF1-210ENST00000531579 NKRFO15226 690 aaKnown RBP eCLIP17.2■□□□□ 0.34
NXF1-210ENST00000531579 SEC24BO95487 1268 aa17.2■□□□□ 0.34
NXF1-210ENST00000531579 CST5P28325 142 aaPredicted RBP17.2■□□□□ 0.34
NXF1-210ENST00000531579 HOXA13P31271 388 aaPredicted RBP17.2■□□□□ 0.34
NXF1-210ENST00000531579 SMARCC2Q8TAQ2 1214 aa17.2■□□□□ 0.34
NXF1-210ENST00000531579 GLT8D2Q9H1C3 349 aa17.2■□□□□ 0.34
NXF1-210ENST00000531579 PHF24Q9UPV7 400 aa17.2■□□□□ 0.34
NXF1-210ENST00000531579 SYNRGQ9UMZ2 1314 aa17.2■□□□□ 0.34
NXF1-210ENST00000531579 PRPF3O43395 683 aaKnown RBP17.19■□□□□ 0.34
NXF1-210ENST00000531579 ZEB2O60315 1214 aa17.19■□□□□ 0.34
NXF1-210ENST00000531579 C6orf222P0C671 652 aaPredicted RBP17.19■□□□□ 0.34
NXF1-210ENST00000531579 SMPD1P17405 629 aa17.19■□□□□ 0.34
NXF1-210ENST00000531579 EIF2AK2P19525 551 aaKnown RBP17.19■□□□□ 0.34
NXF1-210ENST00000531579 AKAP17AQ02040 695 aaKnown RBP17.19■□□□□ 0.34
NXF1-210ENST00000531579 TTLL4Q14679 1199 aa17.19■□□□□ 0.34
NXF1-210ENST00000531579 C8orf34Q49A92 452 aa17.19■□□□□ 0.34
NXF1-210ENST00000531579 GNASQ5JWF2 1037 aa17.19■□□□□ 0.34
NXF1-210ENST00000531579 PRPF38BQ5VTL8 546 aaKnown RBP17.19■□□□□ 0.34
NXF1-210ENST00000531579 KCNV1Q6PIU1 500 aa17.19■□□□□ 0.34
NXF1-210ENST00000531579 VSIG10LQ86VR7 867 aa17.19■□□□□ 0.34
NXF1-210ENST00000531579 FCHSD1Q86WN1 690 aa17.19■□□□□ 0.34
NXF1-210ENST00000531579 PDCD2LQ9BRP1 358 aa17.19■□□□□ 0.34
NXF1-210ENST00000531579 CNTNAP5Q8WYK1 1306 aa17.19■□□□□ 0.34
NXF1-210ENST00000531579 MYH6P13533 1939 aa17.18■□□□□ 0.34
NXF1-210ENST00000531579 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.18■□□□□ 0.34
NXF1-210ENST00000531579 hCG_1642624A0A1W2PR95 340 aa17.18■□□□□ 0.34
NXF1-210ENST00000531579 MEIS2O14770 477 aa17.18■□□□□ 0.34
NXF1-210ENST00000531579 DYNC1LI2O43237 492 aaPredicted RBP17.18■□□□□ 0.34
NXF1-210ENST00000531579 STAM2O75886 525 aa17.18■□□□□ 0.34
NXF1-210ENST00000531579 IFNAR1P17181 557 aa17.18■□□□□ 0.34
NXF1-210ENST00000531579 KCNA10Q16322 511 aa17.18■□□□□ 0.34
NXF1-210ENST00000531579 C1orf53Q5VUE5 145 aa17.18■□□□□ 0.34
NXF1-210ENST00000531579 CCSAPQ6IQ19 270 aaPredicted RBP17.18■□□□□ 0.34
NXF1-210ENST00000531579 PPP1R18Q6NYC8 613 aa17.18■□□□□ 0.34
NXF1-210ENST00000531579 XRRA1Q6P2D8 792 aa17.18■□□□□ 0.34
NXF1-210ENST00000531579 CPLX2Q6PUV4 134 aaKnown RBP17.18■□□□□ 0.34
NXF1-210ENST00000531579 SLC39A5Q6ZMH5 540 aa17.18■□□□□ 0.34
NXF1-210ENST00000531579 HEATR3Q7Z4Q2 680 aa17.18■□□□□ 0.34
NXF1-210ENST00000531579 TLK2Q86UE8 772 aa17.18■□□□□ 0.34
NXF1-210ENST00000531579 DDX49Q9Y6V7 483 aaKnown RBP17.18■□□□□ 0.34
NXF1-210ENST00000531579 ADCY6O43306 1168 aa17.17■□□□□ 0.34
NXF1-210ENST00000531579 TXNP10599 105 aaKnown RBP17.17■□□□□ 0.34
NXF1-210ENST00000531579 TGFB3P10600 412 aa17.17■□□□□ 0.34
NXF1-210ENST00000531579 ACLYP53396 1101 aa17.17■□□□□ 0.34
NXF1-210ENST00000531579 PGM5Q15124 567 aa17.17■□□□□ 0.34
NXF1-210ENST00000531579 PFKFB3Q16875 520 aaPredicted RBP17.17■□□□□ 0.34
NXF1-210ENST00000531579 BRDTQ58F21 947 aaPredicted RBP17.17■□□□□ 0.34
NXF1-210ENST00000531579 LENG1Q96BZ8 264 aaPredicted RBP17.17■□□□□ 0.34
NXF1-210ENST00000531579 GLT1D1Q96MS3 346 aa17.17■□□□□ 0.34
NXF1-210ENST00000531579 RNF26Q9BY78 433 aaPredicted RBP17.17■□□□□ 0.34
NXF1-210ENST00000531579 BARHL2Q9NY43 387 aa17.17■□□□□ 0.34
NXF1-210ENST00000531579 BAZ2BQ9UIF8 2168 aaKnown RBP17.17■□□□□ 0.34
NXF1-210ENST00000531579 CPLX1O14810 134 aa17.16■□□□□ 0.34
NXF1-210ENST00000531579 CABYRO75952 493 aa17.16■□□□□ 0.34
NXF1-210ENST00000531579 MYCLP12524 364 aaPredicted RBP17.16■□□□□ 0.34
NXF1-210ENST00000531579 SCG2P13521 617 aa17.16■□□□□ 0.34
NXF1-210ENST00000531579 CCND2P30279 289 aa17.16■□□□□ 0.34
NXF1-210ENST00000531579 NAPAP54920 295 aa17.16■□□□□ 0.34
NXF1-210ENST00000531579 CCT2P78371 535 aaKnown RBP17.16■□□□□ 0.34
NXF1-210ENST00000531579 NTRK3Q16288 839 aa17.16■□□□□ 0.34
NXF1-210ENST00000531579 FSCN1Q16658 493 aaKnown RBP17.16■□□□□ 0.34
NXF1-210ENST00000531579 WWC2Q6AWC2 1192 aa17.16■□□□□ 0.34
NXF1-210ENST00000531579 USP17L6PQ6QN14 398 aa17.16■□□□□ 0.34
NXF1-210ENST00000531579 SEPT14Q6ZU15 432 aa17.16■□□□□ 0.34
NXF1-210ENST00000531579 TRIM22Q8IYM9 498 aa17.16■□□□□ 0.34
NXF1-210ENST00000531579 IL27Q8NEV9 243 aa17.16■□□□□ 0.34
NXF1-210ENST00000531579 CCDC12Q8WUD4 166 aaPredicted RBP17.16■□□□□ 0.34
NXF1-210ENST00000531579 SEZ6LQ9BYH1 1024 aa17.16■□□□□ 0.34
NXF1-210ENST00000531579 ELP1O95163 1332 aa17.16■□□□□ 0.34
NXF1-210ENST00000531579 SMCO2A6NFE2 343 aa17.15■□□□□ 0.34
NXF1-210ENST00000531579 SPDYE3A6NKU9 549 aa17.15■□□□□ 0.34
NXF1-210ENST00000531579 CTAGE5O15320 804 aa17.15■□□□□ 0.34
NXF1-210ENST00000531579 KPNA6O60684 536 aa17.15■□□□□ 0.34
NXF1-210ENST00000531579 FOSP01100 380 aaPredicted RBP17.15■□□□□ 0.34
NXF1-210ENST00000531579 ASGR1P07306 291 aa17.15■□□□□ 0.34
NXF1-210ENST00000531579 CPT1AP50416 773 aa17.15■□□□□ 0.34
NXF1-210ENST00000531579 NEK4P51957 841 aa17.15■□□□□ 0.34
NXF1-210ENST00000531579 LRRC26Q2I0M4 334 aa17.15■□□□□ 0.34
NXF1-210ENST00000531579 MCTP2Q6DN12 878 aa17.15■□□□□ 0.34
NXF1-210ENST00000531579 CCDC62Q6P9F0 684 aa17.15■□□□□ 0.34
NXF1-210ENST00000531579 GPKOWQ92917 476 aaPredicted RBP eCLIP17.15■□□□□ 0.342e-6■■■■■ 30.4
NXF1-210ENST00000531579 FERMT2Q96AC1 680 aa17.15■□□□□ 0.34
NXF1-210ENST00000531579 EHMT1Q9H9B1 1298 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms