RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 RGS22Q8NE09 1264 aa12.99□□□□□ -0.33
SORT1-204ENST00000482236 SMARCC2Q8TAQ2 1214 aa12.99□□□□□ -0.33
SORT1-204ENST00000482236 LRCH3Q96II8 777 aa12.99□□□□□ -0.33
SORT1-204ENST00000482236 LZTS2Q9BRK4 669 aa12.99□□□□□ -0.33
SORT1-204ENST00000482236 KATNBL1Q9H079 304 aa12.99□□□□□ -0.33
SORT1-204ENST00000482236 GNEQ9Y223 722 aaKnown RBP12.99□□□□□ -0.33
SORT1-204ENST00000482236 Q9Y3F1 56 aa12.99□□□□□ -0.33
SORT1-204ENST00000482236 MCM3APO60318 1980 aa12.98□□□□□ -0.33
SORT1-204ENST00000482236 PNMA6FA0A0J9YX94 578 aa12.98□□□□□ -0.33
SORT1-204ENST00000482236 TRIM43BA6NCK2 446 aa12.98□□□□□ -0.33
SORT1-204ENST00000482236 PALM3A6NDB9 673 aaPredicted RBP12.98□□□□□ -0.33
SORT1-204ENST00000482236 RXRAP19793 462 aa12.98□□□□□ -0.33
SORT1-204ENST00000482236 PSMC6P62333 389 aa12.98□□□□□ -0.33
SORT1-204ENST00000482236 TMEM199Q8N511 208 aa12.98□□□□□ -0.33
SORT1-204ENST00000482236 TRIM43Q96BQ3 446 aaPredicted RBP12.98□□□□□ -0.33
SORT1-204ENST00000482236 TOX2Q96NM4 488 aa12.98□□□□□ -0.33
SORT1-204ENST00000482236 NEK1Q96PY6 1258 aa12.98□□□□□ -0.33
SORT1-204ENST00000482236 TAAR1Q96RJ0 339 aa12.98□□□□□ -0.33
SORT1-204ENST00000482236 IWS1Q96ST2 819 aa12.98□□□□□ -0.33
SORT1-204ENST00000482236 MTG1Q9BT17 334 aaPredicted RBP12.98□□□□□ -0.33
SORT1-204ENST00000482236 LRRC2Q9BYS8 371 aa12.98□□□□□ -0.33
SORT1-204ENST00000482236 PRO3102Q9H379 93 aa12.98□□□□□ -0.33
SORT1-204ENST00000482236 LY9Q9HBG7 655 aa12.98□□□□□ -0.33
SORT1-204ENST00000482236 SENP2Q9HC62 589 aa12.98□□□□□ -0.33
SORT1-204ENST00000482236 LRRC37A2A6NM11 1700 aa12.97□□□□□ -0.33
SORT1-204ENST00000482236 SOX1O00570 391 aaPredicted RBP12.97□□□□□ -0.33
SORT1-204ENST00000482236 SH2B2O14492 632 aaPredicted RBP12.97□□□□□ -0.33
SORT1-204ENST00000482236 GH1P01241 217 aa12.97□□□□□ -0.33
SORT1-204ENST00000482236 PTGS1P23219 599 aa12.97□□□□□ -0.33
SORT1-204ENST00000482236 CCND2P30279 289 aa12.97□□□□□ -0.33
SORT1-204ENST00000482236 ANTXR2P58335 489 aa12.97□□□□□ -0.33
SORT1-204ENST00000482236 PPIGQ13427 754 aaKnown RBP eCLIP12.97□□□□□ -0.33
SORT1-204ENST00000482236 ANKRD33Q7Z3H0 272 aa12.97□□□□□ -0.33
SORT1-204ENST00000482236 CCDC82Q8N4S0 544 aa12.97□□□□□ -0.33
SORT1-204ENST00000482236 DEFB123Q8N688 67 aa12.97□□□□□ -0.33
SORT1-204ENST00000482236 MORC4Q8TE76 937 aa12.97□□□□□ -0.33
SORT1-204ENST00000482236 SEZ6LQ9BYH1 1024 aa12.97□□□□□ -0.33
SORT1-204ENST00000482236 MAF1Q9H063 256 aa12.97□□□□□ -0.33
SORT1-204ENST00000482236 MTIF3Q9H2K0 278 aaKnown RBP12.97□□□□□ -0.33
SORT1-204ENST00000482236 HIPK3Q9H422 1215 aa12.97□□□□□ -0.33
SORT1-204ENST00000482236 PXMP2Q9NR77 195 aa12.97□□□□□ -0.33
SORT1-204ENST00000482236 KIAA0355O15063 1070 aa12.96□□□□□ -0.33
SORT1-204ENST00000482236 SORBS3O60504 671 aa12.96□□□□□ -0.33
SORT1-204ENST00000482236 KPNA6O60684 536 aa12.96□□□□□ -0.33
SORT1-204ENST00000482236 REC8O95072 547 aa12.96□□□□□ -0.33
SORT1-204ENST00000482236 NR3C2P08235 984 aa12.96□□□□□ -0.33
SORT1-204ENST00000482236 SUPT20HL2P0C7V6 817 aa12.96□□□□□ -0.33
SORT1-204ENST00000482236 FAAP100Q0VG06 881 aa12.96□□□□□ -0.33
SORT1-204ENST00000482236 LRIT3Q3SXY7 679 aa12.96□□□□□ -0.33
SORT1-204ENST00000482236 GNPTABQ3T906 1256 aa12.96□□□□□ -0.33
SORT1-204ENST00000482236 ZNF697Q5TEC3 545 aa12.96□□□□□ -0.33
SORT1-204ENST00000482236 CCSAPQ6IQ19 270 aaPredicted RBP12.96□□□□□ -0.33
SORT1-204ENST00000482236 HEATR3Q7Z4Q2 680 aa12.96□□□□□ -0.33
SORT1-204ENST00000482236 DHX37Q8IY37 1157 aaKnown RBP12.96□□□□□ -0.33
SORT1-204ENST00000482236 IGDCC4Q8TDY8 1250 aa12.96□□□□□ -0.33
SORT1-204ENST00000482236 TBC1D5Q92609 795 aa12.96□□□□□ -0.33
SORT1-204ENST00000482236 COPS5Q92905 334 aa12.96□□□□□ -0.33
SORT1-204ENST00000482236 MTA3Q9BTC8 594 aa12.96□□□□□ -0.33
SORT1-204ENST00000482236 SMCHD1A6NHR9 2005 aa12.95□□□□□ -0.34
SORT1-204ENST00000482236 GOLGA8AA7E2F4 631 aa12.95□□□□□ -0.34
SORT1-204ENST00000482236 GOLGA8BA8MQT2 603 aa12.95□□□□□ -0.34
SORT1-204ENST00000482236 NOP56O00567 594 aaKnown RBP12.95□□□□□ -0.34
SORT1-204ENST00000482236 EIF3JO75822 258 aaKnown RBP12.95□□□□□ -0.34
SORT1-204ENST00000482236 TIMP1P01033 207 aa12.95□□□□□ -0.34
SORT1-204ENST00000482236 HMGB1P09429 215 aaKnown RBP12.95□□□□□ -0.34
SORT1-204ENST00000482236 EDNRBP24530 442 aa12.95□□□□□ -0.34
SORT1-204ENST00000482236 TROAPQ12815 778 aa12.95□□□□□ -0.34
SORT1-204ENST00000482236 SHHQ15465 462 aa12.95□□□□□ -0.34
SORT1-204ENST00000482236 LY6KQ17RY6 165 aa12.95□□□□□ -0.34
SORT1-204ENST00000482236 RIOX1Q9H6W3 641 aa12.95□□□□□ -0.34
SORT1-204ENST00000482236 EHMT1Q9H9B1 1298 aa12.95□□□□□ -0.34
SORT1-204ENST00000482236 MAP3K20Q9NYL2 800 aaKnown RBP12.95□□□□□ -0.34
SORT1-204ENST00000482236 COL20A1Q9P218 1284 aa12.95□□□□□ -0.34
SORT1-204ENST00000482236 ZBTB43O43298 467 aa12.94□□□□□ -0.34
SORT1-204ENST00000482236 PPP1R11O60927 126 aaPredicted RBP12.94□□□□□ -0.34
SORT1-204ENST00000482236 PLEKHA8P1O95397 391 aa12.94□□□□□ -0.34
SORT1-204ENST00000482236 CASTP20810 708 aaKnown RBP12.94□□□□□ -0.34
SORT1-204ENST00000482236 HSD17B4P51659 736 aa12.94□□□□□ -0.34
SORT1-204ENST00000482236 NECTIN1Q15223 517 aa12.94□□□□□ -0.34
SORT1-204ENST00000482236 RTN1Q16799 776 aa12.94□□□□□ -0.34
SORT1-204ENST00000482236 TMEM63BQ5T3F8 832 aa12.94□□□□□ -0.34
SORT1-204ENST00000482236 PSRC1Q6PGN9 363 aaPredicted RBP12.94□□□□□ -0.34
SORT1-204ENST00000482236 KCNV1Q6PIU1 500 aa12.94□□□□□ -0.34
SORT1-204ENST00000482236 FAM126BQ8IXS8 530 aa12.94□□□□□ -0.34
SORT1-204ENST00000482236 CMTR1Q8N1G2 835 aaKnown RBP12.94□□□□□ -0.34
SORT1-204ENST00000482236 SAMD3Q8N6K7 520 aa12.94□□□□□ -0.34
SORT1-204ENST00000482236 CCDC155Q8N6L0 562 aa12.94□□□□□ -0.34
SORT1-204ENST00000482236 RETREG2Q8NC44 543 aa12.94□□□□□ -0.34
SORT1-204ENST00000482236 AFG1LQ8WV93 481 aa12.94□□□□□ -0.34
SORT1-204ENST00000482236 TCEANC2Q96MN5 208 aa12.94□□□□□ -0.34
SORT1-204ENST00000482236 FAM161BQ96MY7 647 aa12.94□□□□□ -0.34
SORT1-204ENST00000482236 JAKMIP1Q96N16 626 aaKnown RBP12.94□□□□□ -0.34
SORT1-204ENST00000482236 PDCD2LQ9BRP1 358 aa12.94□□□□□ -0.34
SORT1-204ENST00000482236 SPZ1Q9BXG8 430 aa12.94□□□□□ -0.34
SORT1-204ENST00000482236 TRPV6Q9H1D0 765 aa12.94□□□□□ -0.34
SORT1-204ENST00000482236 MLXIPQ9HAP2 919 aa12.94□□□□□ -0.34
SORT1-204ENST00000482236 RBM28Q9NW13 759 aaKnown RBP12.94□□□□□ -0.34
SORT1-204ENST00000482236 KLF18A0A0U1RQI7 1052 aa12.93□□□□□ -0.34
SORT1-204ENST00000482236 RBM47A0AV96 593 aaKnown RBP12.93□□□□□ -0.34
SORT1-204ENST00000482236 SPDYE3A6NKU9 549 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms