RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 ZHX1Q9UKY1 873 aaPredicted RBP20.5■□□□□ 0.87
SMIM4-202ENST00000476842 DDX49Q9Y6V7 483 aaKnown RBP20.5■□□□□ 0.87
SMIM4-202ENST00000476842 STXBP3O00186 592 aa20.49■□□□□ 0.87
SMIM4-202ENST00000476842 NAPAP54920 295 aa20.49■□□□□ 0.87
SMIM4-202ENST00000476842 PDE4DQ08499 809 aa20.49■□□□□ 0.87
SMIM4-202ENST00000476842 TYW1BQ6NUM6 668 aa20.49■□□□□ 0.87
SMIM4-202ENST00000476842 USP17L6PQ6QN14 398 aa20.49■□□□□ 0.87
SMIM4-202ENST00000476842 NOL8Q76FK4 1167 aaKnown RBP20.49■□□□□ 0.87
SMIM4-202ENST00000476842 PXMP2Q9NR77 195 aa20.49■□□□□ 0.87
SMIM4-202ENST00000476842 LIMCH1Q9UPQ0 1083 aa20.49■□□□□ 0.87
SMIM4-202ENST00000476842 CDKL5O76039 1030 aa20.48■□□□□ 0.87
SMIM4-202ENST00000476842 CCDC144BQ3MJ40 725 aa20.48■□□□□ 0.87
SMIM4-202ENST00000476842 TAPT1Q6NXT6 567 aa20.48■□□□□ 0.87
SMIM4-202ENST00000476842 FCHSD1Q86WN1 690 aa20.48■□□□□ 0.87
SMIM4-202ENST00000476842 TRIM22Q8IYM9 498 aa20.48■□□□□ 0.87
SMIM4-202ENST00000476842 ANKLE1Q8NAG6 615 aa20.48■□□□□ 0.87
SMIM4-202ENST00000476842 SMARCC2Q8TAQ2 1214 aa20.48■□□□□ 0.87
SMIM4-202ENST00000476842 RIC8AQ9NPQ8 531 aa20.48■□□□□ 0.87
SMIM4-202ENST00000476842 SMCO2A6NFE2 343 aa20.47■□□□□ 0.87
SMIM4-202ENST00000476842 PPFIA3O75145 1194 aa20.47■□□□□ 0.87
SMIM4-202ENST00000476842 LARGE1O95461 756 aa20.47■□□□□ 0.87
SMIM4-202ENST00000476842 NR3C2P08235 984 aa20.47■□□□□ 0.87
SMIM4-202ENST00000476842 RARBP10826 455 aa20.47■□□□□ 0.87
SMIM4-202ENST00000476842 EIF2AK2P19525 551 aaKnown RBP20.47■□□□□ 0.87
SMIM4-202ENST00000476842 STXBP2Q15833 593 aa20.47■□□□□ 0.87
SMIM4-202ENST00000476842 IQSEC1Q6DN90 963 aa20.47■□□□□ 0.87
SMIM4-202ENST00000476842 EEPD1Q7L9B9 569 aa20.47■□□□□ 0.87
SMIM4-202ENST00000476842 GTF3C6Q969F1 213 aa20.47■□□□□ 0.87
SMIM4-202ENST00000476842 PDCD2LQ9BRP1 358 aa20.47■□□□□ 0.87
SMIM4-202ENST00000476842 GLT8D2Q9H1C3 349 aa20.47■□□□□ 0.87
SMIM4-202ENST00000476842 BRCA2P51587 3418 aa20.47■□□□□ 0.87
SMIM4-202ENST00000476842 PLXNA1Q9UIW2 1896 aa20.46■□□□□ 0.87
SMIM4-202ENST00000476842 RBM47A0AV96 593 aaKnown RBP20.46■□□□□ 0.87
SMIM4-202ENST00000476842 DEXIO95424 95 aa20.46■□□□□ 0.87
SMIM4-202ENST00000476842 ANO1Q5XXA6 986 aa20.46■□□□□ 0.87
SMIM4-202ENST00000476842 FBXO16Q8IX29 292 aaPredicted RBP20.46■□□□□ 0.87
SMIM4-202ENST00000476842 NECAB1Q8N987 351 aa20.46■□□□□ 0.87
SMIM4-202ENST00000476842 CCDC12Q8WUD4 166 aaPredicted RBP20.46■□□□□ 0.87
SMIM4-202ENST00000476842 ZSCAN31Q96LW9 406 aaPredicted RBP20.46■□□□□ 0.87
SMIM4-202ENST00000476842 PDGFCQ9NRA1 345 aa20.46■□□□□ 0.87
SMIM4-202ENST00000476842 KIAA0100Q14667 2235 aaKnown RBP20.45■□□□□ 0.86
SMIM4-202ENST00000476842 DUSP11O75319 330 aaKnown RBP20.45■□□□□ 0.86
SMIM4-202ENST00000476842 EIF3JO75822 258 aaKnown RBP20.45■□□□□ 0.86
SMIM4-202ENST00000476842 CTDNEP1O95476 244 aa20.45■□□□□ 0.86
SMIM4-202ENST00000476842 TNFAIP2Q03169 654 aa20.45■□□□□ 0.86
SMIM4-202ENST00000476842 PGM5Q15124 567 aa20.45■□□□□ 0.86
SMIM4-202ENST00000476842 UBE2Q1Q7Z7E8 422 aa20.45■□□□□ 0.86
SMIM4-202ENST00000476842 VSIG10LQ86VR7 867 aa20.45■□□□□ 0.86
SMIM4-202ENST00000476842 ARRDC4Q8NCT1 418 aa20.45■□□□□ 0.86
SMIM4-202ENST00000476842 SH3GLB2Q9NR46 395 aa20.45■□□□□ 0.86
SMIM4-202ENST00000476842 ESYT2A0FGR8 921 aa20.44■□□□□ 0.86
SMIM4-202ENST00000476842 ST18O60284 1047 aa20.44■□□□□ 0.86
SMIM4-202ENST00000476842 ADCYAP1R1P41586 468 aa20.44■□□□□ 0.86
SMIM4-202ENST00000476842 MNX1P50219 401 aaPredicted RBP20.44■□□□□ 0.86
SMIM4-202ENST00000476842 ADCY7P51828 1080 aa20.44■□□□□ 0.86
SMIM4-202ENST00000476842 UBE2SQ16763 222 aa20.44■□□□□ 0.86
SMIM4-202ENST00000476842 ZMYND12Q9H0C1 365 aa20.44■□□□□ 0.86
SMIM4-202ENST00000476842 XPNPEP3Q9NQH7 507 aa20.44■□□□□ 0.86
SMIM4-202ENST00000476842 FRMPD4Q14CM0 1322 aa20.44■□□□□ 0.86
SMIM4-202ENST00000476842 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.43■□□□□ 0.86
SMIM4-202ENST00000476842 ADCY6O43306 1168 aa20.43■□□□□ 0.86
SMIM4-202ENST00000476842 MYCLP12524 364 aaPredicted RBP20.43■□□□□ 0.86
SMIM4-202ENST00000476842 WDR11Q9BZH6 1224 aa20.43■□□□□ 0.86
SMIM4-202ENST00000476842 C6orf50Q9HD87 102 aa20.43■□□□□ 0.86
SMIM4-202ENST00000476842 PCDHA6Q9UN73 950 aa20.43■□□□□ 0.86
SMIM4-202ENST00000476842 GNEQ9Y223 722 aaKnown RBP20.43■□□□□ 0.86
SMIM4-202ENST00000476842 Q9Y3F1 56 aa20.43■□□□□ 0.86
SMIM4-202ENST00000476842 PCDHA8Q9Y5H6 950 aa20.43■□□□□ 0.86
SMIM4-202ENST00000476842 STK36Q9NRP7 1315 aa20.43■□□□□ 0.86
SMIM4-202ENST00000476842 MYH6P13533 1939 aa20.43■□□□□ 0.86
SMIM4-202ENST00000476842 SPDYE3A6NKU9 549 aa20.42■□□□□ 0.86
SMIM4-202ENST00000476842 FARP2O94887 1054 aaPredicted RBP20.42■□□□□ 0.86
SMIM4-202ENST00000476842 FOSP01100 380 aaPredicted RBP20.42■□□□□ 0.86
SMIM4-202ENST00000476842 SMPD1P17405 629 aa20.42■□□□□ 0.86
SMIM4-202ENST00000476842 GNA11P29992 359 aa20.42■□□□□ 0.86
SMIM4-202ENST00000476842 CCND2P30279 289 aa20.42■□□□□ 0.86
SMIM4-202ENST00000476842 LRRC41Q15345 812 aa20.42■□□□□ 0.86
SMIM4-202ENST00000476842 XRRA1Q6P2D8 792 aa20.42■□□□□ 0.86
SMIM4-202ENST00000476842 FAM177A1Q8N128 213 aaPredicted RBP20.42■□□□□ 0.86
SMIM4-202ENST00000476842 CCDC148Q8NFR7 591 aa20.42■□□□□ 0.86
SMIM4-202ENST00000476842 SCFD2Q8WU76 684 aa20.42■□□□□ 0.86
SMIM4-202ENST00000476842 SH2B1Q9NRF2 756 aaPredicted RBP20.42■□□□□ 0.86
SMIM4-202ENST00000476842 VPS54Q9P1Q0 977 aa20.42■□□□□ 0.86
SMIM4-202ENST00000476842 RBBP6Q7Z6E9 1792 aaKnown RBP20.41■□□□□ 0.86
SMIM4-202ENST00000476842 LCTP09848 1927 aa20.41■□□□□ 0.86
SMIM4-202ENST00000476842 DNM1LO00429 736 aa20.41■□□□□ 0.86
SMIM4-202ENST00000476842 ADAMTS4O75173 837 aa20.41■□□□□ 0.86
SMIM4-202ENST00000476842 STAM2O75886 525 aa20.41■□□□□ 0.86
SMIM4-202ENST00000476842 PGK1P00558 417 aa20.41■□□□□ 0.86
SMIM4-202ENST00000476842 CLK2P49760 499 aaKnown RBP20.41■□□□□ 0.86
SMIM4-202ENST00000476842 GJA9P57773 515 aa20.41■□□□□ 0.86
SMIM4-202ENST00000476842 NKX3-2P78367 333 aa20.41■□□□□ 0.86
SMIM4-202ENST00000476842 DUSP28Q4G0W2 176 aa20.41■□□□□ 0.86
SMIM4-202ENST00000476842 GJC2Q5T442 439 aaPredicted RBP20.41■□□□□ 0.86
SMIM4-202ENST00000476842 MCTP2Q6DN12 878 aa20.41■□□□□ 0.86
SMIM4-202ENST00000476842 NECAB2Q7Z6G3 386 aa20.41■□□□□ 0.86
SMIM4-202ENST00000476842 RNF180Q86T96 592 aa20.41■□□□□ 0.86
SMIM4-202ENST00000476842 NSUN7Q8NE18 718 aaKnown RBP20.41■□□□□ 0.86
SMIM4-202ENST00000476842 IL31RAQ8NI17 732 aa20.41■□□□□ 0.86
SMIM4-202ENST00000476842 LENG1Q96BZ8 264 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms