RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 NLRP7Q8WX94 980 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 NUP58Q9BVL2 599 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 NOD1Q9Y239 953 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 DKC1O60832 514 aaKnown RBP eCLIP12.56□□□□□ -0.4
U2AF1-209ENST00000475639 AP1G2O75843 785 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 ICA1Q05084 483 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 PICALMQ13492 652 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 HDAC7Q8WUI4 952 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 NUDT16Q96DE0 195 aaKnown RBP12.56□□□□□ -0.4
U2AF1-209ENST00000475639 BSDC1Q9NW68 430 aaPredicted RBP12.56□□□□□ -0.4
U2AF1-209ENST00000475639 TSKSQ9UJT2 592 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 BAG2O95816 211 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 ANXA1P04083 346 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 PEX19P40855 299 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 MORC3Q14149 939 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 PAPD7Q5XG87 772 aaKnown RBP12.56□□□□□ -0.4
U2AF1-209ENST00000475639 CDCA2Q69YH5 1023 aaPredicted RBP12.56□□□□□ -0.4
U2AF1-209ENST00000475639 RCSD1Q6JBY9 416 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 MYCBPAPQ8TBZ2 947 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 SPDL1Q96EA4 605 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 CCT8L2Q96SF2 557 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 CHPF2Q9P2E5 772 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 PARP2Q9UGN5 583 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 TFR2Q9UP52 801 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 ZNF185O15231 689 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 FLOT1O75955 427 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 ACCSLQ4AC99 568 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 CFAP221Q4G0U5 840 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 TMTC4Q5T4D3 741 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 JADE1Q6IE81 842 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 CYP26C1Q6V0L0 522 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 RPGRIP1Q96KN7 1286 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 SPC25Q9HBM1 224 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 ABHD10Q9NUJ1 306 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 STK38LQ9Y2H1 464 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 MAP3K2Q9Y2U5 619 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 RTL9Q8NET4 1388 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 LRRD1A4D1F6 860 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 E7EWF7 191 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 RGS16O15492 202 aaPredicted RBP12.55□□□□□ -0.4
U2AF1-209ENST00000475639 KRT14P02533 472 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 CD19P15391 556 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 SLC8A1P32418 973 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 PHBP35232 272 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 ESRRGP62508 458 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 C2orf54Q08AI8 447 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 EZH2Q15910 746 aaKnown RBP12.55□□□□□ -0.4
U2AF1-209ENST00000475639 NT5DC1Q5TFE4 455 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 TTLL7Q6ZT98 887 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 PROCA1Q8NCQ7 364 aaPredicted RBP12.55□□□□□ -0.4
U2AF1-209ENST00000475639 ZBTB21Q9ULJ3 1066 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 DNM1LO00429 736 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 OPLAHO14841 1288 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 GNAT2P19087 354 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 CDC25AP30304 524 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 SARSP49591 514 aaKnown RBP12.55□□□□□ -0.4
U2AF1-209ENST00000475639 POSTNQ15063 836 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 RPS6KA1Q15418 735 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 PTGISQ16647 500 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 GPC4O75487 556 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 APOEP02649 317 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 PDE6BP35913 854 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 SP4Q02446 784 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 DENND2CQ68D51 928 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 SYCE1Q8N0S2 351 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 IL17REQ8NFR9 667 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 CCDC124Q96CT7 223 aaKnown RBP12.55□□□□□ -0.4
U2AF1-209ENST00000475639 CCDC51Q96ER9 411 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 MAP3K14Q99558 947 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 RAB17Q9H0T7 212 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 VPS16Q9H269 839 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 SEC31BQ9NQW1 1179 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 WASLO00401 505 aaPredicted RBP12.55□□□□□ -0.4
U2AF1-209ENST00000475639 PPP1R37O75864 691 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 APBA1Q02410 837 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 NNTQ13423 1086 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 DRP2Q13474 957 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 PPP2R5EQ16537 467 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 CCDC84Q86UT8 332 aaPredicted RBP12.55□□□□□ -0.4
U2AF1-209ENST00000475639 NLRP14Q86W24 1093 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 NBPF5PQ86XG9 351 aaPredicted RBP12.55□□□□□ -0.4
U2AF1-209ENST00000475639 GRAMD1CQ8IYS0 662 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 ITFG2Q969R8 447 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 NLRP3Q96P20 1036 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 RIOK1Q9BRS2 568 aaKnown RBP12.55□□□□□ -0.4
U2AF1-209ENST00000475639 OSBPL7Q9BZF2 842 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 VPS37BQ9H9H4 285 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 DMGDHQ9UI17 866 aaKnown RBP12.55□□□□□ -0.4
U2AF1-209ENST00000475639 EXOC7Q9UPT5 735 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 OVOS2A0A0G2JMS6 1433 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 OVOS2A0A0J9YW53 1432 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 OVOS2Q6IE36 1432 aa12.55□□□□□ -0.4
U2AF1-209ENST00000475639 ASIC2Q16515 512 aa12.54□□□□□ -0.4
U2AF1-209ENST00000475639 NBPF9Q3BBW0 867 aa12.54□□□□□ -0.4
U2AF1-209ENST00000475639 KDM7AQ6ZMT4 941 aa12.54□□□□□ -0.4
U2AF1-209ENST00000475639 ANKRD13DQ6ZTN6 518 aa12.54□□□□□ -0.4
U2AF1-209ENST00000475639 KAZALD1Q96I82 304 aa12.54□□□□□ -0.4
U2AF1-209ENST00000475639 GGA2Q9UJY4 613 aa12.54□□□□□ -0.4
U2AF1-209ENST00000475639 ANKARQ7Z5J8 1434 aa12.54□□□□□ -0.4
U2AF1-209ENST00000475639 KDRP35968 1356 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms