RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 ACRBPQ8NEB7 543 aa14.45□□□□□ -0.1
CCNL1-216ENST00000475298 RASSF8Q8NHQ8 419 aa14.45□□□□□ -0.1
CCNL1-216ENST00000475298 LRRC15Q8TF66 581 aa14.45□□□□□ -0.1
CCNL1-216ENST00000475298 NELFBQ8WX92 580 aa14.45□□□□□ -0.1
CCNL1-216ENST00000475298 CRACR2AQ9BSW2 395 aa14.45□□□□□ -0.1
CCNL1-216ENST00000475298 SH3GLB2Q9NR46 395 aa14.45□□□□□ -0.1
CCNL1-216ENST00000475298 LY75O60449 1722 aa14.44□□□□□ -0.1
CCNL1-216ENST00000475298 PALM3A6NDB9 673 aaPredicted RBP14.44□□□□□ -0.1
CCNL1-216ENST00000475298 TRIM49BA6NDI0 452 aa14.44□□□□□ -0.1
CCNL1-216ENST00000475298 KLRF2D3W0D1 207 aa14.44□□□□□ -0.1
CCNL1-216ENST00000475298 ZMYND10O75800 440 aa14.44□□□□□ -0.1
CCNL1-216ENST00000475298 CDK8P49336 464 aa14.44□□□□□ -0.1
CCNL1-216ENST00000475298 FXR1P51114 621 aaKnown RBP eCLIP14.44□□□□□ -0.1
CCNL1-216ENST00000475298 ACTN3Q08043 901 aaPredicted RBP14.44□□□□□ -0.1
CCNL1-216ENST00000475298 ARL6IP4Q66PJ3 421 aaKnown RBP14.44□□□□□ -0.1
CCNL1-216ENST00000475298 USP17L2Q6R6M4 530 aa14.44□□□□□ -0.1
CCNL1-216ENST00000475298 B4GALNT4Q76KP1 1039 aa14.44□□□□□ -0.1
CCNL1-216ENST00000475298 PPFIBP1Q86W92 1011 aa14.44□□□□□ -0.1
CCNL1-216ENST00000475298 EYA3Q99504 573 aa14.44□□□□□ -0.1
CCNL1-216ENST00000475298 DISC1Q9NRI5 854 aa14.44□□□□□ -0.1
CCNL1-216ENST00000475298 BARHL2Q9NY43 387 aa14.44□□□□□ -0.1
CCNL1-216ENST00000475298 TAB2Q9NYJ8 693 aa14.44□□□□□ -0.1
CCNL1-216ENST00000475298 THSD7AQ9UPZ6 1657 aa14.44□□□□□ -0.1
CCNL1-216ENST00000475298 TMCO5BA8MYB1 307 aa14.44□□□□□ -0.1
CCNL1-216ENST00000475298 GYPCP04921 128 aa14.44□□□□□ -0.1
CCNL1-216ENST00000475298 PRCPP42785 496 aa14.44□□□□□ -0.1
CCNL1-216ENST00000475298 SMTNP53814 917 aa14.44□□□□□ -0.1
CCNL1-216ENST00000475298 IRX1P78414 480 aaPredicted RBP14.44□□□□□ -0.1
CCNL1-216ENST00000475298 PAK1Q13153 545 aa14.44□□□□□ -0.1
CCNL1-216ENST00000475298 DTHD1Q6ZMT9 781 aa14.44□□□□□ -0.1
CCNL1-216ENST00000475298 FAM43BQ6ZT52 329 aaPredicted RBP14.44□□□□□ -0.1
CCNL1-216ENST00000475298 VAT1LQ9HCJ6 419 aa14.44□□□□□ -0.1
CCNL1-216ENST00000475298 DDX20Q9UHI6 824 aaKnown RBP14.44□□□□□ -0.1
CCNL1-216ENST00000475298 DDX60LQ5H9U9 1706 aaKnown RBP14.44□□□□□ -0.1
CCNL1-216ENST00000475298 GOLGA6BA6NDN3 693 aa14.43□□□□□ -0.1
CCNL1-216ENST00000475298 RNF225M0QZC1 329 aaPredicted RBP14.43□□□□□ -0.1
CCNL1-216ENST00000475298 MCM3P25205 808 aa14.43□□□□□ -0.1
CCNL1-216ENST00000475298 GNAQP50148 359 aa14.43□□□□□ -0.1
CCNL1-216ENST00000475298 GRIK3Q13003 919 aa14.43□□□□□ -0.1
CCNL1-216ENST00000475298 ZNF658Q5TYW1 1059 aaPredicted RBP14.43□□□□□ -0.1
CCNL1-216ENST00000475298 TRIM6Q9C030 488 aaPredicted RBP14.43□□□□□ -0.1
CCNL1-216ENST00000475298 TCP11L1Q9NUJ3 509 aa14.43□□□□□ -0.1
CCNL1-216ENST00000475298 TTF2Q9UNY4 1162 aaKnown RBP14.43□□□□□ -0.1
CCNL1-216ENST00000475298 FLT1P17948 1338 aa14.43□□□□□ -0.1
CCNL1-216ENST00000475298 MYH8P13535 1937 aa14.43□□□□□ -0.1
CCNL1-216ENST00000475298 TARSL2A2RTX5 802 aaKnown RBP14.42□□□□□ -0.1
CCNL1-216ENST00000475298 NDUFAB1O14561 156 aa14.42□□□□□ -0.1
CCNL1-216ENST00000475298 N4BP3O15049 544 aa14.42□□□□□ -0.1
CCNL1-216ENST00000475298 MFAP3LO75121 409 aa14.42□□□□□ -0.1
CCNL1-216ENST00000475298 KIAA0754O94854 1291 aa14.42□□□□□ -0.1
CCNL1-216ENST00000475298 LDHCP07864 332 aa14.42□□□□□ -0.1
CCNL1-216ENST00000475298 CALRP27797 417 aaKnown RBP14.42□□□□□ -0.1
CCNL1-216ENST00000475298 CCNHP51946 323 aaPredicted RBP14.42□□□□□ -0.1
CCNL1-216ENST00000475298 PMS1P54277 932 aaKnown RBP14.42□□□□□ -0.1
CCNL1-216ENST00000475298 SKOR1P84550 965 aa14.42□□□□□ -0.1
CCNL1-216ENST00000475298 FILIP1LQ4L180 1135 aa14.42□□□□□ -0.1
CCNL1-216ENST00000475298 MFSD14BQ5SR56 506 aa14.42□□□□□ -0.1
CCNL1-216ENST00000475298 CCNI2Q6ZMN8 369 aaPredicted RBP14.42□□□□□ -0.1
CCNL1-216ENST00000475298 TRAPPC11Q7Z392 1133 aa14.42□□□□□ -0.1
CCNL1-216ENST00000475298 YTHDF3Q7Z739 585 aaKnown RBP14.42□□□□□ -0.1
CCNL1-216ENST00000475298 FMNL3Q8IVF7 1028 aa14.42□□□□□ -0.1
CCNL1-216ENST00000475298 MMS19Q96T76 1030 aa14.42□□□□□ -0.1
CCNL1-216ENST00000475298 PAGR1Q9BTK6 254 aa14.42□□□□□ -0.1
CCNL1-216ENST00000475298 VCPKMTQ9H867 229 aa14.42□□□□□ -0.1
CCNL1-216ENST00000475298 RWDD2AQ9UIY3 292 aa14.42□□□□□ -0.1
CCNL1-216ENST00000475298 FECHP22830 423 aa14.42□□□□□ -0.1
CCNL1-216ENST00000475298 NAPAP54920 295 aa14.42□□□□□ -0.1
CCNL1-216ENST00000475298 TLDC1Q6P9B6 456 aa14.42□□□□□ -0.1
CCNL1-216ENST00000475298 FAM228AQ86W67 206 aa14.42□□□□□ -0.1
CCNL1-216ENST00000475298 CEP95Q96GE4 821 aa14.42□□□□□ -0.1
CCNL1-216ENST00000475298 CTAGE1Q96RT6 745 aa14.42□□□□□ -0.1
CCNL1-216ENST00000475298 POLLQ9UGP5 575 aa14.42□□□□□ -0.1
CCNL1-216ENST00000475298 GGA1Q9UJY5 639 aa14.42□□□□□ -0.1
CCNL1-216ENST00000475298 GPR75-ASB3A0A0A6YYF3 556 aa14.41□□□□□ -0.1
CCNL1-216ENST00000475298 KCNJ18B7U540 433 aa14.41□□□□□ -0.1
CCNL1-216ENST00000475298 GYS1P13807 737 aa14.41□□□□□ -0.1
CCNL1-216ENST00000475298 IBSPP21815 317 aaPredicted RBP14.41□□□□□ -0.1
CCNL1-216ENST00000475298 RHBDL3P58872 404 aa14.41□□□□□ -0.1
CCNL1-216ENST00000475298 KCNJ12Q14500 433 aa14.41□□□□□ -0.1
CCNL1-216ENST00000475298 LETM2Q2VYF4 491 aa14.41□□□□□ -0.1
CCNL1-216ENST00000475298 CCDC40Q4G0X9 1142 aa14.41□□□□□ -0.1
CCNL1-216ENST00000475298 C16orf86Q6ZW13 317 aa14.41□□□□□ -0.1
CCNL1-216ENST00000475298 EEF2KMTQ96G04 330 aa14.41□□□□□ -0.1
CCNL1-216ENST00000475298 UBA5Q9GZZ9 404 aa14.41□□□□□ -0.1
CCNL1-216ENST00000475298 MYO1AQ9UBC5 1043 aa14.41□□□□□ -0.1
CCNL1-216ENST00000475298 SERPINB2P05120 415 aa14.41□□□□□ -0.1
CCNL1-216ENST00000475298 UBA7P41226 1012 aa14.41□□□□□ -0.1
CCNL1-216ENST00000475298 COPB1P53618 953 aaKnown RBP14.41□□□□□ -0.1
CCNL1-216ENST00000475298 SARNPP82979 210 aaKnown RBP14.41□□□□□ -0.1
CCNL1-216ENST00000475298 PDCLQ13371 301 aa14.41□□□□□ -0.1
CCNL1-216ENST00000475298 TCP11X2Q5H9J9 407 aa14.41□□□□□ -0.1
CCNL1-216ENST00000475298 CEP85LQ5SZL2 805 aa14.41□□□□□ -0.1
CCNL1-216ENST00000475298 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.41□□□□□ -0.1
CCNL1-216ENST00000475298 SPATS2Q86XZ4 545 aaKnown RBP14.41□□□□□ -0.1
CCNL1-216ENST00000475298 DAGLBQ8NCG7 672 aa14.41□□□□□ -0.1
CCNL1-216ENST00000475298 HDAC6Q9UBN7 1215 aa14.41□□□□□ -0.1
CCNL1-216ENST00000475298 LIMA1Q9UHB6 759 aaKnown RBP14.41□□□□□ -0.1
CCNL1-216ENST00000475298 ANKRD33BA6NCL7 494 aa14.4□□□□□ -0.1
CCNL1-216ENST00000475298 PARP1P09874 1014 aaKnown RBP14.4□□□□□ -0.1
CCNL1-216ENST00000475298 IL1R1P14778 569 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms