RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 FTCDO95954 541 aa18.71■□□□□ 0.59
SYNC-202ENST00000409190 TNNI2P48788 182 aa18.71■□□□□ 0.59
SYNC-202ENST00000409190 C12orf60Q5U649 245 aa18.71■□□□□ 0.59
SYNC-202ENST00000409190 NDST4Q9H3R1 872 aa18.71■□□□□ 0.59
SYNC-202ENST00000409190 BARHL2Q9NY43 387 aa18.71■□□□□ 0.59
SYNC-202ENST00000409190 BICDL2A1A5D9 508 aa18.7■□□□□ 0.58
SYNC-202ENST00000409190 AMOTL1Q8IY63 956 aa18.7■□□□□ 0.58
SYNC-202ENST00000409190 MICALL1Q8N3F8 863 aa18.7■□□□□ 0.58
SYNC-202ENST00000409190 DHTKD1Q96HY7 919 aaPredicted RBP18.7■□□□□ 0.58
SYNC-202ENST00000409190 FAM107BQ9H098 131 aa18.7■□□□□ 0.58
SYNC-202ENST00000409190 MYMKA6NI61 221 aa18.7■□□□□ 0.58
SYNC-202ENST00000409190 FGRP09769 529 aa18.7■□□□□ 0.58
SYNC-202ENST00000409190 LIG3P49916 1009 aa18.7■□□□□ 0.58
SYNC-202ENST00000409190 SPATA4Q8NEY3 305 aa18.7■□□□□ 0.58
SYNC-202ENST00000409190 TTYH3Q9C0H2 523 aa18.7■□□□□ 0.58
SYNC-202ENST00000409190 GOLPH3Q9H4A6 298 aa18.7■□□□□ 0.58
SYNC-202ENST00000409190 SEC63Q9UGP8 760 aaKnown RBP18.7■□□□□ 0.58
SYNC-202ENST00000409190 SLC1A4P43007 532 aa18.7■□□□□ 0.58
SYNC-202ENST00000409190 KCNB1Q14721 858 aa18.7■□□□□ 0.58
SYNC-202ENST00000409190 CREG2Q8IUH2 290 aa18.7■□□□□ 0.58
SYNC-202ENST00000409190 LRRC47Q8N1G4 583 aaKnown RBP18.7■□□□□ 0.58
SYNC-202ENST00000409190 GPCPD1Q9NPB8 672 aa18.7■□□□□ 0.58
SYNC-202ENST00000409190 PAPPAQ13219 1627 aa18.69■□□□□ 0.58
SYNC-202ENST00000409190 PRPF6O94906 941 aaKnown RBP18.69■□□□□ 0.58
SYNC-202ENST00000409190 PICALMQ13492 652 aa18.69■□□□□ 0.58
SYNC-202ENST00000409190 SV2BQ7L1I2 683 aa18.69■□□□□ 0.58
SYNC-202ENST00000409190 SNX12Q9UMY4 172 aa18.69■□□□□ 0.58
SYNC-202ENST00000409190 TIAM2Q8IVF5 1701 aa18.69■□□□□ 0.58
SYNC-202ENST00000409190 GRM4Q14833 912 aa18.69■□□□□ 0.58
SYNC-202ENST00000409190 MEA1Q16626 185 aa18.69■□□□□ 0.58
SYNC-202ENST00000409190 NEK8Q86SG6 692 aa18.69■□□□□ 0.58
SYNC-202ENST00000409190 ARL8AQ96BM9 186 aa18.69■□□□□ 0.58
SYNC-202ENST00000409190 OSBPL9Q96SU4 736 aa18.69■□□□□ 0.58
SYNC-202ENST00000409190 CCSER1Q9C0I3 900 aa18.69■□□□□ 0.58
SYNC-202ENST00000409190 TSPYL1Q9H0U9 437 aa18.69■□□□□ 0.58
SYNC-202ENST00000409190 TUBB4BP68371 445 aa18.68■□□□□ 0.58
SYNC-202ENST00000409190 TSEN2Q8NCE0 465 aaKnown RBP18.68■□□□□ 0.58
SYNC-202ENST00000409190 LINC00116Q8NCU8 138 aa18.68■□□□□ 0.58
SYNC-202ENST00000409190 SETDB2Q96T68 719 aa18.68■□□□□ 0.58
SYNC-202ENST00000409190 RBM12Q9NTZ6 932 aaKnown RBP18.68■□□□□ 0.58
SYNC-202ENST00000409190 FLT1P17948 1338 aa18.68■□□□□ 0.58
SYNC-202ENST00000409190 F8W031 263 aaPredicted RBP18.68■□□□□ 0.58
SYNC-202ENST00000409190 KRT14P02533 472 aa18.68■□□□□ 0.58
SYNC-202ENST00000409190 SLURP2P0DP57 97 aa18.68■□□□□ 0.58
SYNC-202ENST00000409190 GNGT1P63211 74 aa18.68■□□□□ 0.58
SYNC-202ENST00000409190 UBE2SQ16763 222 aa18.68■□□□□ 0.58
SYNC-202ENST00000409190 CCDC40Q4G0X9 1142 aa18.68■□□□□ 0.58
SYNC-202ENST00000409190 FAM114A1Q8IWE2 563 aa18.68■□□□□ 0.58
SYNC-202ENST00000409190 BCAS4Q8TDM0 211 aa18.68■□□□□ 0.58
SYNC-202ENST00000409190 EYA3Q99504 573 aa18.68■□□□□ 0.58
SYNC-202ENST00000409190 NUP58Q9BVL2 599 aa18.68■□□□□ 0.58
SYNC-202ENST00000409190 SHANK3Q9BYB0 1731 aa18.68■□□□□ 0.58
SYNC-202ENST00000409190 USP17L5A8MUK1 530 aa18.68■□□□□ 0.58
SYNC-202ENST00000409190 TRAF5O00463 557 aa18.68■□□□□ 0.58
SYNC-202ENST00000409190 VWA3BQ502W6 1294 aa18.68■□□□□ 0.58
SYNC-202ENST00000409190 KCNK18Q7Z418 384 aa18.68■□□□□ 0.58
SYNC-202ENST00000409190 PACS2Q86VP3 889 aa18.68■□□□□ 0.58
SYNC-202ENST00000409190 DGKHQ86XP1 1220 aa18.68■□□□□ 0.58
SYNC-202ENST00000409190 SNX29Q8TEQ0 813 aa18.68■□□□□ 0.58
SYNC-202ENST00000409190 MTMR8Q96EF0 704 aa18.68■□□□□ 0.58
SYNC-202ENST00000409190 SLC37A4O43826 429 aa18.67■□□□□ 0.58
SYNC-202ENST00000409190 PDCLQ13371 301 aa18.67■□□□□ 0.58
SYNC-202ENST00000409190 NFIXQ14938 502 aa18.67■□□□□ 0.58
SYNC-202ENST00000409190 TRADDQ15628 312 aa18.67■□□□□ 0.58
SYNC-202ENST00000409190 C8orf74Q6P047 294 aa18.67■□□□□ 0.58
SYNC-202ENST00000409190 TRIM58Q8NG06 486 aa18.67■□□□□ 0.58
SYNC-202ENST00000409190 MMTAG2Q9BU76 263 aaKnown RBP18.67■□□□□ 0.58
SYNC-202ENST00000409190 C6orf50Q9HD87 102 aa18.67■□□□□ 0.58
SYNC-202ENST00000409190 TUBBP07437 444 aa18.67■□□□□ 0.58
SYNC-202ENST00000409190 MCM3P25205 808 aa18.67■□□□□ 0.58
SYNC-202ENST00000409190 CNNM4Q6P4Q7 775 aa18.67■□□□□ 0.58
SYNC-202ENST00000409190 JRKLQ9Y4A0 524 aa18.67■□□□□ 0.58
SYNC-202ENST00000409190 PCP11498 1178 aaKnown RBP18.67■□□□□ 0.58
SYNC-202ENST00000409190 PAFAH1B1P43034 410 aa18.67■□□□□ 0.58
SYNC-202ENST00000409190 CALCRLQ16602 461 aa18.67■□□□□ 0.58
SYNC-202ENST00000409190 TMED8Q6PL24 325 aaPredicted RBP18.67■□□□□ 0.58
SYNC-202ENST00000409190 REXO1Q8N1G1 1221 aaKnown RBP18.67■□□□□ 0.58
SYNC-202ENST00000409190 ALS2CR12Q96Q35 445 aa18.67■□□□□ 0.58
SYNC-202ENST00000409190 SH2D4AQ9H788 454 aa18.67■□□□□ 0.58
SYNC-202ENST00000409190 NFU1Q9UMS0 254 aa18.67■□□□□ 0.58
SYNC-202ENST00000409190 GNAQP50148 359 aa18.66■□□□□ 0.58
SYNC-202ENST00000409190 KLHL7Q8IXQ5 586 aa18.66■□□□□ 0.58
SYNC-202ENST00000409190 CCDC170Q8IYT3 715 aa18.66■□□□□ 0.58
SYNC-202ENST00000409190 POLR2FP61218 127 aaKnown RBP18.66■□□□□ 0.58
SYNC-202ENST00000409190 AMPD3Q01432 767 aa18.66■□□□□ 0.58
SYNC-202ENST00000409190 SF3B3Q15393 1217 aaKnown RBP18.66■□□□□ 0.58
SYNC-202ENST00000409190 TTC31Q49AM3 519 aaPredicted RBP18.66■□□□□ 0.58
SYNC-202ENST00000409190 CEP95Q96GE4 821 aa18.66■□□□□ 0.58
SYNC-202ENST00000409190 FAM184BQ9ULE4 1060 aa18.66■□□□□ 0.58
SYNC-202ENST00000409190 ZC3H4Q9UPT8 1303 aaKnown RBP18.66■□□□□ 0.58
SYNC-202ENST00000409190 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.66■□□□□ 0.58
SYNC-202ENST00000409190 M0R2N6 131 aa18.65■□□□□ 0.58
SYNC-202ENST00000409190 PPFIA4O75335 1185 aa18.65■□□□□ 0.58
SYNC-202ENST00000409190 RASA1P20936 1047 aa18.65■□□□□ 0.58
SYNC-202ENST00000409190 GUCY2DQ02846 1103 aa18.65■□□□□ 0.58
SYNC-202ENST00000409190 RAPGEF1Q13905 1077 aa18.65■□□□□ 0.58
SYNC-202ENST00000409190 IQCEQ6IPM2 695 aa18.65■□□□□ 0.58
SYNC-202ENST00000409190 ITGB4P16144 1822 aa18.65■□□□□ 0.58
SYNC-202ENST00000409190 NPHP3-ACAD11A0A0J9YXS1 232 aa18.65■□□□□ 0.58
SYNC-202ENST00000409190 EHHADHQ08426 723 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms