RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 ALDH8A1Q9H2A2 487 aaPredicted RBP23.99■■□□□ 1.43
PDGFA-204ENST00000405692 PXMP2Q9NR77 195 aa23.99■■□□□ 1.43
PDGFA-204ENST00000405692 Q9Y3F1 56 aa23.99■■□□□ 1.43
PDGFA-204ENST00000405692 V9GY48 417 aaPredicted RBP23.99■■□□□ 1.43
PDGFA-204ENST00000405692 BAZ2BQ9UIF8 2168 aaKnown RBP23.99■■□□□ 1.43
PDGFA-204ENST00000405692 LCTP09848 1927 aa23.98■■□□□ 1.43
PDGFA-204ENST00000405692 PPP1R18Q6NYC8 613 aa23.98■■□□□ 1.43
PDGFA-204ENST00000405692 SCFD2Q8WU76 684 aa23.98■■□□□ 1.43
PDGFA-204ENST00000405692 SENP6Q9GZR1 1112 aaPredicted RBP23.98■■□□□ 1.43
PDGFA-204ENST00000405692 AP5M1Q9H0R1 490 aa23.98■■□□□ 1.43
PDGFA-204ENST00000405692 PSTPIP2Q9H939 334 aa23.98■■□□□ 1.43
PDGFA-204ENST00000405692 SYNRGQ9UMZ2 1314 aa23.98■■□□□ 1.43
PDGFA-204ENST00000405692 hCG_1642624A0A1W2PR95 340 aa23.97■■□□□ 1.43
PDGFA-204ENST00000405692 RBM47A0AV96 593 aaKnown RBP23.97■■□□□ 1.43
PDGFA-204ENST00000405692 PIK3CDO00329 1044 aa23.97■■□□□ 1.43
PDGFA-204ENST00000405692 ADAMTS4O75173 837 aa23.97■■□□□ 1.43
PDGFA-204ENST00000405692 NR3C2P08235 984 aa23.97■■□□□ 1.43
PDGFA-204ENST00000405692 EIF2AK2P19525 551 aaKnown RBP23.97■■□□□ 1.43
PDGFA-204ENST00000405692 GJA9P57773 515 aa23.97■■□□□ 1.43
PDGFA-204ENST00000405692 FCHSD1Q86WN1 690 aa23.97■■□□□ 1.43
PDGFA-204ENST00000405692 PCSK9Q8NBP7 692 aaKnown RBP23.97■■□□□ 1.43
PDGFA-204ENST00000405692 LENG1Q96BZ8 264 aaPredicted RBP23.97■■□□□ 1.43
PDGFA-204ENST00000405692 WDR11Q9BZH6 1224 aa23.97■■□□□ 1.43
PDGFA-204ENST00000405692 UPF3AQ9H1J1 476 aaKnown RBP23.97■■□□□ 1.43
PDGFA-204ENST00000405692 PDGFCQ9NRA1 345 aa23.97■■□□□ 1.43
PDGFA-204ENST00000405692 NR2E3Q9Y5X4 410 aa23.97■■□□□ 1.43
PDGFA-204ENST00000405692 DDX49Q9Y6V7 483 aaKnown RBP23.97■■□□□ 1.43
PDGFA-204ENST00000405692 MCM3APO60318 1980 aa23.96■■□□□ 1.43
PDGFA-204ENST00000405692 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.96■■□□□ 1.43
PDGFA-204ENST00000405692 NKRFO15226 690 aaKnown RBP eCLIP23.96■■□□□ 1.43
PDGFA-204ENST00000405692 EVI5O60447 810 aa23.96■■□□□ 1.43
PDGFA-204ENST00000405692 EIF3JO75822 258 aaKnown RBP23.96■■□□□ 1.43
PDGFA-204ENST00000405692 C6orf222P0C671 652 aaPredicted RBP23.96■■□□□ 1.43
PDGFA-204ENST00000405692 CST5P28325 142 aaPredicted RBP23.96■■□□□ 1.43
PDGFA-204ENST00000405692 DUSP28Q4G0W2 176 aa23.96■■□□□ 1.43
PDGFA-204ENST00000405692 CPLX2Q6PUV4 134 aaKnown RBP23.96■■□□□ 1.43
PDGFA-204ENST00000405692 PDCD2LQ9BRP1 358 aa23.96■■□□□ 1.43
PDGFA-204ENST00000405692 GLT8D2Q9H1C3 349 aa23.96■■□□□ 1.43
PDGFA-204ENST00000405692 GNEQ9Y223 722 aaKnown RBP23.96■■□□□ 1.43
PDGFA-204ENST00000405692 BRCA2P51587 3418 aa23.96■■□□□ 1.43
PDGFA-204ENST00000405692 MOXD2PA6NHM9 499 aa23.95■■□□□ 1.42
PDGFA-204ENST00000405692 CPLX1O14810 134 aa23.95■■□□□ 1.42
PDGFA-204ENST00000405692 SMPD1P17405 629 aa23.95■■□□□ 1.42
PDGFA-204ENST00000405692 NAPAP54920 295 aa23.95■■□□□ 1.42
PDGFA-204ENST00000405692 NKX3-2P78367 333 aa23.95■■□□□ 1.42
PDGFA-204ENST00000405692 CCT2P78371 535 aaKnown RBP23.95■■□□□ 1.42
PDGFA-204ENST00000405692 TTLL4Q14679 1199 aa23.95■■□□□ 1.42
PDGFA-204ENST00000405692 TLK2Q86UE8 772 aa23.95■■□□□ 1.42
PDGFA-204ENST00000405692 KLHDC9Q8NEP7 349 aa23.95■■□□□ 1.42
PDGFA-204ENST00000405692 UPF2Q9HAU5 1272 aaKnown RBP23.95■■□□□ 1.42
PDGFA-204ENST00000405692 PHF24Q9UPV7 400 aa23.95■■□□□ 1.42
PDGFA-204ENST00000405692 LRRC37A2A6NM11 1700 aa23.94■■□□□ 1.42
PDGFA-204ENST00000405692 ADCY6O43306 1168 aa23.94■■□□□ 1.42
PDGFA-204ENST00000405692 PRPF3O43395 683 aaKnown RBP23.94■■□□□ 1.42
PDGFA-204ENST00000405692 ZEB2O60315 1214 aa23.94■■□□□ 1.42
PDGFA-204ENST00000405692 IFNAR1P17181 557 aa23.94■■□□□ 1.42
PDGFA-204ENST00000405692 CCND2P30279 289 aa23.94■■□□□ 1.42
PDGFA-204ENST00000405692 PGM5Q15124 567 aa23.94■■□□□ 1.42
PDGFA-204ENST00000405692 GNASQ5JWF2 1037 aa23.94■■□□□ 1.42
PDGFA-204ENST00000405692 WWC2Q6AWC2 1192 aa23.94■■□□□ 1.42
PDGFA-204ENST00000405692 CCDC12Q8WUD4 166 aaPredicted RBP23.94■■□□□ 1.42
PDGFA-204ENST00000405692 GPKOWQ92917 476 aaPredicted RBP eCLIP23.94■■□□□ 1.42
PDGFA-204ENST00000405692 RNF26Q9BY78 433 aaPredicted RBP23.94■■□□□ 1.42
PDGFA-204ENST00000405692 BARHL2Q9NY43 387 aa23.94■■□□□ 1.42
PDGFA-204ENST00000405692 MEIS2O14770 477 aa23.93■■□□□ 1.42
PDGFA-204ENST00000405692 DYNC1LI2O43237 492 aaPredicted RBP23.93■■□□□ 1.42
PDGFA-204ENST00000405692 STAM2O75886 525 aa23.93■■□□□ 1.42
PDGFA-204ENST00000405692 MYCLP12524 364 aaPredicted RBP23.93■■□□□ 1.42
PDGFA-204ENST00000405692 SCG2P13521 617 aa23.93■■□□□ 1.42
PDGFA-204ENST00000405692 PFKFB3Q16875 520 aaPredicted RBP23.93■■□□□ 1.42
PDGFA-204ENST00000405692 USP17L6PQ6QN14 398 aa23.93■■□□□ 1.42
PDGFA-204ENST00000405692 VSIG10LQ86VR7 867 aa23.93■■□□□ 1.42
PDGFA-204ENST00000405692 TRIM22Q8IYM9 498 aa23.93■■□□□ 1.42
PDGFA-204ENST00000405692 EHMT1Q9H9B1 1298 aa23.93■■□□□ 1.42
PDGFA-204ENST00000405692 TXNP10599 105 aaKnown RBP23.92■■□□□ 1.42
PDGFA-204ENST00000405692 NEK4P51957 841 aa23.92■■□□□ 1.42
PDGFA-204ENST00000405692 NTRK3Q16288 839 aa23.92■■□□□ 1.42
PDGFA-204ENST00000405692 KCNA10Q16322 511 aa23.92■■□□□ 1.42
PDGFA-204ENST00000405692 BRDTQ58F21 947 aaPredicted RBP23.92■■□□□ 1.42
PDGFA-204ENST00000405692 PRPF38BQ5VTL8 546 aaKnown RBP23.92■■□□□ 1.42
PDGFA-204ENST00000405692 XRRA1Q6P2D8 792 aa23.92■■□□□ 1.42
PDGFA-204ENST00000405692 KCNV1Q6PIU1 500 aa23.92■■□□□ 1.42
PDGFA-204ENST00000405692 SEPT14Q6ZU15 432 aa23.92■■□□□ 1.42
PDGFA-204ENST00000405692 SLKQ9H2G2 1235 aaPredicted RBP23.92■■□□□ 1.42
PDGFA-204ENST00000405692 GTF3C3Q9Y5Q9 886 aa23.92■■□□□ 1.42
PDGFA-204ENST00000405692 FRMPD4Q14CM0 1322 aa23.91■■□□□ 1.42
PDGFA-204ENST00000405692 SPDYE3A6NKU9 549 aa23.91■■□□□ 1.42
PDGFA-204ENST00000405692 ACLYP53396 1101 aa23.91■■□□□ 1.42
PDGFA-204ENST00000405692 FSCN1Q16658 493 aaKnown RBP23.91■■□□□ 1.42
PDGFA-204ENST00000405692 GLT1D1Q96MS3 346 aa23.91■■□□□ 1.42
PDGFA-204ENST00000405692 SLC26A6Q9BXS9 759 aa23.91■■□□□ 1.42
PDGFA-204ENST00000405692 NCOA5Q9HCD5 579 aaKnown RBP23.91■■□□□ 1.42
PDGFA-204ENST00000405692 RIC8AQ9NPQ8 531 aa23.91■■□□□ 1.42
PDGFA-204ENST00000405692 SMCO2A6NFE2 343 aa23.9■■□□□ 1.42
PDGFA-204ENST00000405692 STXBP3O00186 592 aa23.9■■□□□ 1.42
PDGFA-204ENST00000405692 CDKL5O76039 1030 aa23.9■■□□□ 1.42
PDGFA-204ENST00000405692 CPT1AP50416 773 aa23.9■■□□□ 1.42
PDGFA-204ENST00000405692 ADCY7P51828 1080 aa23.9■■□□□ 1.42
PDGFA-204ENST00000405692 AK2P54819 239 aa23.9■■□□□ 1.42
PDGFA-204ENST00000405692 SSRP1Q08945 709 aaKnown RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms