RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 KIF24Q5T7B8 1368 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 NLRX1Q86UT6 975 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 CCDC89Q8N998 374 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 SUPT20HQ8NEM7 779 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 STRBPQ96SI9 672 aaKnown RBP5.47□□□□□ -1.53
LTN1-202ENST00000389194 SMARCAL1Q9NZC9 954 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 GOLGA8SH3BPF8 625 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 FAM133BQ5BKY9 247 aaKnown RBP5.47□□□□□ -1.53
LTN1-202ENST00000389194 STMN2Q93045 179 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 TTC14Q96N46 770 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 STMN4Q9H169 189 aaPredicted RBP5.47□□□□□ -1.53
LTN1-202ENST00000389194 TRIM10Q9UDY6 481 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 NFU1Q9UMS0 254 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 A0A1W2PQ27 194 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 A0A1W2PQ64 194 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 A0A1W2PQD8 194 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 MARK3P27448 753 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 PPFIA1Q13136 1202 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 KCTD19Q17RG1 926 aaPredicted RBP5.47□□□□□ -1.53
LTN1-202ENST00000389194 B4GALNT4Q76KP1 1039 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 VSTM4Q8IW00 320 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 TCP11Q8WWU5 503 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 P2RX5Q93086 422 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 MAGOHBQ96A72 148 aaKnown RBP5.47□□□□□ -1.53
LTN1-202ENST00000389194 PCDHA4Q9UN74 947 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 FNDC3AQ9Y2H6 1198 aaKnown RBP5.47□□□□□ -1.53
LTN1-202ENST00000389194 USP17L5A8MUK1 530 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 CD58P19256 250 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 STAT3P40763 770 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 HNRNPH2P55795 449 aaKnown RBP5.47□□□□□ -1.53
LTN1-202ENST00000389194 LRCH2Q5VUJ6 765 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 KRT26Q7Z3Y9 468 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 CCDC13Q8IYE1 715 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 MICAL1Q8TDZ2 1067 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 MCUR1Q96AQ8 359 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 TMOD4Q9NZQ9 345 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 INTUQ9ULD6 942 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 CCPG1Q9ULG6 757 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 G3BP2Q9UN86 482 aaKnown RBP5.47□□□□□ -1.53
LTN1-202ENST00000389194 RABGAP1Q9Y3P9 1069 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 RIPOR2Q9Y4F9 1068 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 BAG2O95816 211 aa5.46□□□□□ -1.53
LTN1-202ENST00000389194 PNMA6AP0CW24 399 aaPredicted RBP5.46□□□□□ -1.53
LTN1-202ENST00000389194 IRX4P78413 519 aa5.46□□□□□ -1.53
LTN1-202ENST00000389194 PPP2R5AQ15172 486 aa5.46□□□□□ -1.53
LTN1-202ENST00000389194 SCARA5Q6ZMJ2 495 aa5.46□□□□□ -1.53
LTN1-202ENST00000389194 STAG2Q8N3U4 1231 aa5.46□□□□□ -1.53
LTN1-202ENST00000389194 SMC1BQ8NDV3 1235 aa5.46□□□□□ -1.53
LTN1-202ENST00000389194 LRRC45Q96CN5 670 aa5.46□□□□□ -1.53
LTN1-202ENST00000389194 FOXP1Q9H334 677 aaPredicted RBP5.46□□□□□ -1.53
LTN1-202ENST00000389194 TRPC6Q9Y210 931 aa5.46□□□□□ -1.53
LTN1-202ENST00000389194 INPP5FQ9Y2H2 1132 aa5.46□□□□□ -1.53
LTN1-202ENST00000389194 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.46□□□□□ -1.53
LTN1-202ENST00000389194 THAP12O43422 761 aa5.46□□□□□ -1.53
LTN1-202ENST00000389194 SLFN14P0C7P3 912 aa5.46□□□□□ -1.53
LTN1-202ENST00000389194 PRCPP42785 496 aa5.46□□□□□ -1.53
LTN1-202ENST00000389194 LIG4P49917 911 aa5.46□□□□□ -1.53
LTN1-202ENST00000389194 GFPT1Q06210 699 aaPredicted RBP5.46□□□□□ -1.53
LTN1-202ENST00000389194 MTM1Q13496 603 aa5.46□□□□□ -1.53
LTN1-202ENST00000389194 BRD3Q15059 726 aa5.46□□□□□ -1.53
LTN1-202ENST00000389194 WHAMMP3Q1A5X7 153 aa5.46□□□□□ -1.53
LTN1-202ENST00000389194 ABCB5Q2M3G0 1257 aa5.46□□□□□ -1.53
LTN1-202ENST00000389194 MAP7D1Q3KQU3 841 aa5.46□□□□□ -1.53
LTN1-202ENST00000389194 LIN9Q5TKA1 542 aa5.46□□□□□ -1.53
LTN1-202ENST00000389194 ZNF746Q6NUN9 644 aaPredicted RBP5.46□□□□□ -1.53
LTN1-202ENST00000389194 SDCCAG8Q86SQ7 713 aaPredicted RBP5.46□□□□□ -1.53
LTN1-202ENST00000389194 ZBTB33Q86T24 672 aa5.46□□□□□ -1.53
LTN1-202ENST00000389194 LRRC43Q8N309 656 aa5.46□□□□□ -1.53
LTN1-202ENST00000389194 WDR24Q96S15 920 aa5.46□□□□□ -1.53
LTN1-202ENST00000389194 ZNF148Q9UQR1 794 aa5.46□□□□□ -1.53
LTN1-202ENST00000389194 ZNF185O15231 689 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 PPP6R2O75170 966 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 NDUFA10O95299 355 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 H2AFZP0C0S5 128 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 NEDD9Q14511 834 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 H2AFVQ71UI9 128 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 SMYD2Q9NRG4 433 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 ATP11AP98196 1134 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 ZNF211Q13398 564 aaPredicted RBP5.46□□□□□ -1.54
LTN1-202ENST00000389194 SYCP2LQ5T4T6 812 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 NCAPG2Q86XI2 1143 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 PASD1Q8IV76 773 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 DHX40Q8IX18 779 aaKnown RBP5.46□□□□□ -1.54
LTN1-202ENST00000389194 DEPTORQ8TB45 409 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 HAUS4Q9H6D7 363 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 DISC1Q9NRI5 854 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 GCNT4Q9P109 453 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 STIM2Q9P246 746 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 SEPT9Q9UHD8 586 aaPredicted RBP5.46□□□□□ -1.54
LTN1-202ENST00000389194 MAD1L1Q9Y6D9 718 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 NBPF26B4DH59 902 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 HNRNPDLO14979 420 aaKnown RBP5.46□□□□□ -1.54
LTN1-202ENST00000389194 FCER1AP12319 257 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 ATP2A2P16615 1042 aaKnown RBP5.46□□□□□ -1.54
LTN1-202ENST00000389194 HDLBPQ00341 1268 aaKnown RBP5.46□□□□□ -1.54
LTN1-202ENST00000389194 GRIN1Q05586 938 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 DMTNQ08495 405 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 CLUL1Q15846 466 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 FAM47CQ5HY64 1035 aa5.46□□□□□ -1.54
LTN1-202ENST00000389194 NBPF10Q6P3W6 841 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms