RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 NUB1Q9Y5A7 615 aa18.76■□□□□ 0.59
MCF2L-203ENST00000375604 EFCAB6Q5THR3 1501 aa18.76■□□□□ 0.59
MCF2L-203ENST00000375604 FOXD4Q12950 439 aaPredicted RBP18.75■□□□□ 0.59
MCF2L-203ENST00000375604 UBE3CQ15386 1083 aa18.75■□□□□ 0.59
MCF2L-203ENST00000375604 ABI1Q8IZP0 508 aa18.75■□□□□ 0.59
MCF2L-203ENST00000375604 NMT2O60551 498 aa18.75■□□□□ 0.59
MCF2L-203ENST00000375604 EIF2AK2P19525 551 aaKnown RBP18.75■□□□□ 0.59
MCF2L-203ENST00000375604 HADHQ16836 314 aaKnown RBP18.75■□□□□ 0.59
MCF2L-203ENST00000375604 PNMA8AQ86V59 439 aaPredicted RBP18.75■□□□□ 0.59
MCF2L-203ENST00000375604 ZNF341Q9BYN7 854 aa18.75■□□□□ 0.59
MCF2L-203ENST00000375604 SETD1BQ9UPS6 1966 aaKnown RBP18.75■□□□□ 0.59
MCF2L-203ENST00000375604 ZBTB7AO95365 584 aa18.75■□□□□ 0.59
MCF2L-203ENST00000375604 PLEKHA8P1O95397 391 aa18.75■□□□□ 0.59
MCF2L-203ENST00000375604 APOA5Q6Q788 366 aa18.75■□□□□ 0.59
MCF2L-203ENST00000375604 LARP4BQ92615 738 aaKnown RBP18.75■□□□□ 0.59
MCF2L-203ENST00000375604 CFAP57Q96MR6 1250 aa18.75■□□□□ 0.59
MCF2L-203ENST00000375604 LRFN2Q9ULH4 789 aa18.75■□□□□ 0.59
MCF2L-203ENST00000375604 MYL3P08590 195 aa18.75■□□□□ 0.59
MCF2L-203ENST00000375604 NR2F2P24468 414 aa18.75■□□□□ 0.59
MCF2L-203ENST00000375604 AOC3Q16853 763 aa18.75■□□□□ 0.59
MCF2L-203ENST00000375604 DALRD3Q5D0E6 543 aaKnown RBP18.75■□□□□ 0.59
MCF2L-203ENST00000375604 C11orf57Q6ZUT1 292 aaPredicted RBP18.75■□□□□ 0.59
MCF2L-203ENST00000375604 AP5M1Q9H0R1 490 aa18.75■□□□□ 0.59
MCF2L-203ENST00000375604 COPB1P53618 953 aaKnown RBP18.75■□□□□ 0.59
MCF2L-203ENST00000375604 RGS16O15492 202 aaPredicted RBP18.74■□□□□ 0.59
MCF2L-203ENST00000375604 CIAO1O76071 339 aa18.74■□□□□ 0.59
MCF2L-203ENST00000375604 PCK1P35558 622 aa18.74■□□□□ 0.59
MCF2L-203ENST00000375604 TRIP13Q15645 432 aaPredicted RBP18.74■□□□□ 0.59
MCF2L-203ENST00000375604 SH2D4BQ5SQS7 431 aa18.74■□□□□ 0.59
MCF2L-203ENST00000375604 BMP3P12645 472 aa18.74■□□□□ 0.59
MCF2L-203ENST00000375604 ERCC6LQ2NKX8 1250 aa18.74■□□□□ 0.59
MCF2L-203ENST00000375604 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.74■□□□□ 0.59
MCF2L-203ENST00000375604 ZNF148Q9UQR1 794 aa18.74■□□□□ 0.59
MCF2L-203ENST00000375604 MMP10P09238 476 aa18.74■□□□□ 0.59
MCF2L-203ENST00000375604 LONP1P36776 959 aaKnown RBP18.74■□□□□ 0.59
MCF2L-203ENST00000375604 LRRC8AQ8IWT6 810 aa18.74■□□□□ 0.59
MCF2L-203ENST00000375604 FIS1Q9Y3D6 152 aa18.74■□□□□ 0.59
MCF2L-203ENST00000375604 POC1B-GALNT4F8VUJ3 575 aa18.74■□□□□ 0.59
MCF2L-203ENST00000375604 SEMA3EO15041 775 aa18.74■□□□□ 0.59
MCF2L-203ENST00000375604 STX2P32856 288 aa18.74■□□□□ 0.59
MCF2L-203ENST00000375604 TUBB4BP68371 445 aa18.74■□□□□ 0.59
MCF2L-203ENST00000375604 RASGRF1Q13972 1273 aa18.74■□□□□ 0.59
MCF2L-203ENST00000375604 MAP4K1Q92918 833 aa18.74■□□□□ 0.59
MCF2L-203ENST00000375604 ANKRD36BP1Q96IX9 119 aa18.74■□□□□ 0.59
MCF2L-203ENST00000375604 PCDHB6Q9Y5E3 794 aa18.74■□□□□ 0.59
MCF2L-203ENST00000375604 BNIP3LO60238 219 aa18.73■□□□□ 0.59
MCF2L-203ENST00000375604 SASH1O94885 1247 aa18.73■□□□□ 0.59
MCF2L-203ENST00000375604 FAM133AQ8N9E0 248 aa18.73■□□□□ 0.59
MCF2L-203ENST00000375604 A6NJR5 290 aa18.73■□□□□ 0.59
MCF2L-203ENST00000375604 CASP2P42575 452 aa18.73■□□□□ 0.59
MCF2L-203ENST00000375604 BFSP1Q12934 665 aa18.73■□□□□ 0.59
MCF2L-203ENST00000375604 CDC37Q16543 378 aaPredicted RBP18.73■□□□□ 0.59
MCF2L-203ENST00000375604 CEP128Q6ZU80 1094 aa18.73■□□□□ 0.59
MCF2L-203ENST00000375604 GFPT2O94808 682 aa18.73■□□□□ 0.59
MCF2L-203ENST00000375604 AFAP1L2Q8N4X5 818 aa18.73■□□□□ 0.59
MCF2L-203ENST00000375604 PRPF38AQ8NAV1 312 aaKnown RBP18.73■□□□□ 0.59
MCF2L-203ENST00000375604 PPFIBP2Q8ND30 876 aa18.73■□□□□ 0.59
MCF2L-203ENST00000375604 TACO1Q9BSH4 297 aaKnown RBP18.73■□□□□ 0.59
MCF2L-203ENST00000375604 KIF24Q5T7B8 1368 aa18.73■□□□□ 0.59
MCF2L-203ENST00000375604 TUBGCP2Q9BSJ2 902 aa18.73■□□□□ 0.59
MCF2L-203ENST00000375604 C2orf54Q08AI8 447 aa18.73■□□□□ 0.59
MCF2L-203ENST00000375604 DPCR1Q3MIW9 517 aa18.73■□□□□ 0.59
MCF2L-203ENST00000375604 KRT26Q7Z3Y9 468 aa18.73■□□□□ 0.59
MCF2L-203ENST00000375604 NSFP46459 744 aaKnown RBP18.72■□□□□ 0.59
MCF2L-203ENST00000375604 TTC30AQ86WT1 665 aa18.72■□□□□ 0.59
MCF2L-203ENST00000375604 NSUN7Q8NE18 718 aaKnown RBP18.72■□□□□ 0.59
MCF2L-203ENST00000375604 NLRP4Q96MN2 994 aa18.72■□□□□ 0.59
MCF2L-203ENST00000375604 PRR36Q9H6K5 1346 aa18.72■□□□□ 0.59
MCF2L-203ENST00000375604 UBE2TQ9NPD8 197 aaPredicted RBP18.72■□□□□ 0.59
MCF2L-203ENST00000375604 NPC1L1Q9UHC9 1359 aa18.72■□□□□ 0.59
MCF2L-203ENST00000375604 WDR17Q8IZU2 1322 aa18.72■□□□□ 0.59
MCF2L-203ENST00000375604 CDK8P49336 464 aa18.72■□□□□ 0.59
MCF2L-203ENST00000375604 ASPRV1Q53RT3 343 aa18.72■□□□□ 0.59
MCF2L-203ENST00000375604 ZNF772Q68DY9 489 aaPredicted RBP18.72■□□□□ 0.59
MCF2L-203ENST00000375604 MCUQ8NE86 351 aa18.72■□□□□ 0.59
MCF2L-203ENST00000375604 IWS1Q96ST2 819 aa18.72■□□□□ 0.59
MCF2L-203ENST00000375604 RAB17Q9H0T7 212 aa18.72■□□□□ 0.59
MCF2L-203ENST00000375604 EFCC1Q9HA90 598 aa18.72■□□□□ 0.59
MCF2L-203ENST00000375604 MAN1B1Q9UKM7 699 aa18.72■□□□□ 0.59
MCF2L-203ENST00000375604 GSTA1P08263 222 aa18.72■□□□□ 0.59
MCF2L-203ENST00000375604 GSTA2P09210 222 aa18.72■□□□□ 0.59
MCF2L-203ENST00000375604 TTC30BQ8N4P2 665 aa18.72■□□□□ 0.59
MCF2L-203ENST00000375604 COPRSQ9NQ92 184 aa18.72■□□□□ 0.59
MCF2L-203ENST00000375604 LGSNQ5TDP6 509 aa18.72■□□□□ 0.59
MCF2L-203ENST00000375604 KCTD16Q68DU8 428 aa18.72■□□□□ 0.59
MCF2L-203ENST00000375604 FAM149B1Q96BN6 582 aa18.72■□□□□ 0.59
MCF2L-203ENST00000375604 MOCS3O95396 460 aa18.72■□□□□ 0.59
MCF2L-203ENST00000375604 RPS6KA2Q15349 733 aa18.72■□□□□ 0.59
MCF2L-203ENST00000375604 LRRC43Q8N309 656 aa18.72■□□□□ 0.59
MCF2L-203ENST00000375604 FAM49AQ9H0Q0 323 aaPredicted RBP18.72■□□□□ 0.59
MCF2L-203ENST00000375604 ATF2P15336 505 aa18.71■□□□□ 0.59
MCF2L-203ENST00000375604 SLC12A1Q13621 1099 aa18.71■□□□□ 0.59
MCF2L-203ENST00000375604 TBC1D9BQ66K14 1250 aa18.71■□□□□ 0.59
MCF2L-203ENST00000375604 ARMC9Q7Z3E5 817 aa18.71■□□□□ 0.59
MCF2L-203ENST00000375604 PYCARDQ9ULZ3 195 aa18.71■□□□□ 0.59
MCF2L-203ENST00000375604 PTPN12Q05209 780 aaKnown RBP18.71■□□□□ 0.59
MCF2L-203ENST00000375604 TFDP1Q14186 410 aa18.71■□□□□ 0.59
MCF2L-203ENST00000375604 SPATA1Q5VX52 437 aa18.71■□□□□ 0.59
MCF2L-203ENST00000375604 SRGAP1Q7Z6B7 1085 aa18.71■□□□□ 0.59
MCF2L-203ENST00000375604 BANK1Q8NDB2 785 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms