RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 CCDC181Q5TID7 509 aa18.44■□□□□ 0.54
SSH3-201ENST00000308127 SPATA4Q8NEY3 305 aa18.44■□□□□ 0.54
SSH3-201ENST00000308127 COA7Q96BR5 231 aa18.44■□□□□ 0.54
SSH3-201ENST00000308127 DHTKD1Q96HY7 919 aaPredicted RBP18.44■□□□□ 0.54
SSH3-201ENST00000308127 CCSER1Q9C0I3 900 aa18.44■□□□□ 0.54
SSH3-201ENST00000308127 SLC1A4P43007 532 aa18.44■□□□□ 0.54
SSH3-201ENST00000308127 AARSP49588 968 aaKnown RBP eCLIP18.44■□□□□ 0.54
SSH3-201ENST00000308127 TRADDQ15628 312 aa18.44■□□□□ 0.54
SSH3-201ENST00000308127 FAM76AQ8TAV0 307 aa18.44■□□□□ 0.54
SSH3-201ENST00000308127 MTMR8Q96EF0 704 aa18.44■□□□□ 0.54
SSH3-201ENST00000308127 A0A1B0GUL6 1792 aa18.43■□□□□ 0.54
SSH3-201ENST00000308127 TDP2O95551 362 aa18.43■□□□□ 0.54
SSH3-201ENST00000308127 KCNK18Q7Z418 384 aa18.43■□□□□ 0.54
SSH3-201ENST00000308127 LINC00116Q8NCU8 138 aa18.43■□□□□ 0.54
SSH3-201ENST00000308127 OSBPL9Q96SU4 736 aa18.43■□□□□ 0.54
SSH3-201ENST00000308127 NDST4Q9H3R1 872 aa18.43■□□□□ 0.54
SSH3-201ENST00000308127 RBM12Q9NTZ6 932 aaKnown RBP18.43■□□□□ 0.54
SSH3-201ENST00000308127 TACC1O75410 805 aa18.43■□□□□ 0.54
SSH3-201ENST00000308127 EHBP1Q8NDI1 1231 aa18.43■□□□□ 0.54
SSH3-201ENST00000308127 IFT81Q8WYA0 676 aa18.43■□□□□ 0.54
SSH3-201ENST00000308127 TSPYL1Q9H0U9 437 aa18.43■□□□□ 0.54
SSH3-201ENST00000308127 SH2D4AQ9H788 454 aa18.43■□□□□ 0.54
SSH3-201ENST00000308127 ZNF652Q9Y2D9 606 aa18.43■□□□□ 0.54
SSH3-201ENST00000308127 SLC37A4O43826 429 aa18.42■□□□□ 0.54
SSH3-201ENST00000308127 FTCDO95954 541 aa18.42■□□□□ 0.54
SSH3-201ENST00000308127 MAGEA1P43355 309 aa18.42■□□□□ 0.54
SSH3-201ENST00000308127 LIG3P49916 1009 aa18.42■□□□□ 0.54
SSH3-201ENST00000308127 TUBB4BP68371 445 aa18.42■□□□□ 0.54
SSH3-201ENST00000308127 GOLPH3Q9H4A6 298 aa18.42■□□□□ 0.54
SSH3-201ENST00000308127 ANKIB1Q9P2G1 1089 aa18.42■□□□□ 0.54
SSH3-201ENST00000308127 KRT14P02533 472 aa18.42■□□□□ 0.54
SSH3-201ENST00000308127 GUCY2FP51841 1108 aa18.42■□□□□ 0.54
SSH3-201ENST00000308127 NONOQ15233 471 aaKnown RBP eCLIP18.42■□□□□ 0.54
SSH3-201ENST00000308127 XIRP1Q702N8 1843 aaKnown RBP18.42■□□□□ 0.54
SSH3-201ENST00000308127 BICDL2A1A5D9 508 aa18.41■□□□□ 0.54
SSH3-201ENST00000308127 PCP11498 1178 aaKnown RBP18.41■□□□□ 0.54
SSH3-201ENST00000308127 VWA3BQ502W6 1294 aa18.41■□□□□ 0.54
SSH3-201ENST00000308127 CACNA2D4Q7Z3S7 1137 aa18.41■□□□□ 0.54
SSH3-201ENST00000308127 CCDC47Q96A33 483 aaKnown RBP18.41■□□□□ 0.54
SSH3-201ENST00000308127 FGFBP2Q9BYJ0 223 aa18.41■□□□□ 0.54
SSH3-201ENST00000308127 PPFIA4O75335 1185 aa18.41■□□□□ 0.54
SSH3-201ENST00000308127 GNGT1P63211 74 aa18.41■□□□□ 0.54
SSH3-201ENST00000308127 SF3B3Q15393 1217 aaKnown RBP18.41■□□□□ 0.54
SSH3-201ENST00000308127 TMED8Q6PL24 325 aaPredicted RBP18.41■□□□□ 0.54
SSH3-201ENST00000308127 NBPF5PQ86XG9 351 aaPredicted RBP18.41■□□□□ 0.54
SSH3-201ENST00000308127 NELFCDQ8IXH7 590 aa18.41■□□□□ 0.54
SSH3-201ENST00000308127 CCDC170Q8IYT3 715 aa18.41■□□□□ 0.54
SSH3-201ENST00000308127 MICALL1Q8N3F8 863 aa18.41■□□□□ 0.54
SSH3-201ENST00000308127 AENQ8WTP8 325 aaKnown RBP18.41■□□□□ 0.54
SSH3-201ENST00000308127 VIPAS39Q9H9C1 493 aa18.41■□□□□ 0.54
SSH3-201ENST00000308127 FAM184BQ9ULE4 1060 aa18.41■□□□□ 0.54
SSH3-201ENST00000308127 USO1O60763 962 aaKnown RBP18.4■□□□□ 0.54
SSH3-201ENST00000308127 FAM153BP0C7A2 387 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 SLURP2P0DP57 97 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 SLC20A2Q08357 652 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 GRB10Q13322 594 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 PDCLQ13371 301 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 FAM153CQ494X1 144 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 DGKHQ86XP1 1220 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 PURBQ96QR8 312 aaKnown RBP18.4■□□□□ 0.54
SSH3-201ENST00000308127 NUP58Q9BVL2 599 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 BLOC1S4Q9NUP1 217 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 FAM153AQ9UHL3 310 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 SIK3Q9Y2K2 1263 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 JRKLQ9Y4A0 524 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 TARSL2A2RTX5 802 aaKnown RBP18.4■□□□□ 0.54
SSH3-201ENST00000308127 USP17L5A8MUK1 530 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 LDHBP07195 334 aaKnown RBP18.4■□□□□ 0.54
SSH3-201ENST00000308127 TUBBP07437 444 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 RASA1P20936 1047 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 IRAK1P51617 712 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 HAUS3Q68CZ6 603 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 NEK8Q86SG6 692 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 TRIM58Q8NG06 486 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 BCAS4Q8TDM0 211 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 CDK5RAP3Q96JB5 506 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 FAM182BQ5T319 152 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 NFU1Q9UMS0 254 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 PLAGL2Q9UPG8 496 aa18.4■□□□□ 0.54
SSH3-201ENST00000308127 ABCA3Q99758 1704 aa18.39■□□□□ 0.53
SSH3-201ENST00000308127 ZEB2O60315 1214 aa18.39■□□□□ 0.53
SSH3-201ENST00000308127 CARSP49589 748 aaKnown RBP18.39■□□□□ 0.53
SSH3-201ENST00000308127 NFIXQ14938 502 aa18.39■□□□□ 0.53
SSH3-201ENST00000308127 UBE2SQ16763 222 aa18.39■□□□□ 0.53
SSH3-201ENST00000308127 TTC31Q49AM3 519 aaPredicted RBP18.39■□□□□ 0.53
SSH3-201ENST00000308127 SBK1Q52WX2 424 aa18.39■□□□□ 0.53
SSH3-201ENST00000308127 SV2BQ7L1I2 683 aa18.39■□□□□ 0.53
SSH3-201ENST00000308127 CALML4Q96GE6 196 aa18.39■□□□□ 0.53
SSH3-201ENST00000308127 NLRP3Q96P20 1036 aa18.39■□□□□ 0.53
SSH3-201ENST00000308127 PNMA5Q96PV4 448 aa18.39■□□□□ 0.53
SSH3-201ENST00000308127 ERGIC2Q96RQ1 377 aa18.39■□□□□ 0.53
SSH3-201ENST00000308127 MKRN1Q9UHC7 482 aaKnown RBP18.39■□□□□ 0.53
SSH3-201ENST00000308127 PALM3A6NDB9 673 aaPredicted RBP18.39■□□□□ 0.53
SSH3-201ENST00000308127 GLI1P08151 1106 aa18.39■□□□□ 0.53
SSH3-201ENST00000308127 TNNI2P48788 182 aa18.39■□□□□ 0.53
SSH3-201ENST00000308127 TTMPQ5BVD1 217 aa18.39■□□□□ 0.53
SSH3-201ENST00000308127 SOGA3Q5TF21 947 aa18.39■□□□□ 0.53
SSH3-201ENST00000308127 AMIGO3Q86WK7 504 aa18.39■□□□□ 0.53
SSH3-201ENST00000308127 FAM114A1Q8IWE2 563 aa18.39■□□□□ 0.53
SSH3-201ENST00000308127 LRRC47Q8N1G4 583 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms