RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 DIXDC1Q155Q3 683 aa18.96■□□□□ 0.63
SPG7-201ENST00000268704 RRAGAQ7L523 313 aa18.96■□□□□ 0.63
SPG7-201ENST00000268704 TRIM58Q8NG06 486 aa18.96■□□□□ 0.63
SPG7-201ENST00000268704 MS4A14Q96JA4 679 aa18.96■□□□□ 0.63
SPG7-201ENST00000268704 VAT1LQ9HCJ6 419 aa18.96■□□□□ 0.63
SPG7-201ENST00000268704 SAP30BPQ9UHR5 308 aaKnown RBP18.96■□□□□ 0.63
SPG7-201ENST00000268704 PLAGL2Q9UPG8 496 aa18.96■□□□□ 0.63
SPG7-201ENST00000268704 TACC1O75410 805 aa18.95■□□□□ 0.62
SPG7-201ENST00000268704 C12orf60Q5U649 245 aa18.95■□□□□ 0.62
SPG7-201ENST00000268704 DGKHQ86XP1 1220 aa18.95■□□□□ 0.62
SPG7-201ENST00000268704 POTEDQ86YR6 584 aa18.95■□□□□ 0.62
SPG7-201ENST00000268704 FNBP4Q8N3X1 1017 aaPredicted RBP18.95■□□□□ 0.62
SPG7-201ENST00000268704 SIK3Q9Y2K2 1263 aa18.95■□□□□ 0.62
SPG7-201ENST00000268704 AKR1B10O60218 316 aa18.95■□□□□ 0.62
SPG7-201ENST00000268704 GFPT1Q06210 699 aaPredicted RBP18.95■□□□□ 0.62
SPG7-201ENST00000268704 FAM114A1Q8IWE2 563 aa18.95■□□□□ 0.62
SPG7-201ENST00000268704 TMEM47Q9BQJ4 181 aa18.95■□□□□ 0.62
SPG7-201ENST00000268704 TXKP42681 527 aa18.94■□□□□ 0.62
SPG7-201ENST00000268704 IRAK1P51617 712 aa18.94■□□□□ 0.62
SPG7-201ENST00000268704 SF3B3Q15393 1217 aaKnown RBP18.94■□□□□ 0.62
SPG7-201ENST00000268704 GRIK5Q16478 980 aa18.94■□□□□ 0.62
SPG7-201ENST00000268704 C7orf25Q9BPX7 421 aa18.94■□□□□ 0.62
SPG7-201ENST00000268704 NDST4Q9H3R1 872 aa18.94■□□□□ 0.62
SPG7-201ENST00000268704 USO1O60763 962 aaKnown RBP18.94■□□□□ 0.62
SPG7-201ENST00000268704 TTC31Q49AM3 519 aaPredicted RBP18.94■□□□□ 0.62
SPG7-201ENST00000268704 VWA3BQ502W6 1294 aa18.94■□□□□ 0.62
SPG7-201ENST00000268704 MMGT1Q8N4V1 131 aa18.94■□□□□ 0.62
SPG7-201ENST00000268704 TSGA10Q9BZW7 698 aa18.94■□□□□ 0.62
SPG7-201ENST00000268704 TMEM260Q9NX78 707 aa18.94■□□□□ 0.62
SPG7-201ENST00000268704 A0A1W2PQJ5 194 aa18.94■□□□□ 0.62
SPG7-201ENST00000268704 ZSCAN5CA6NGD5 496 aaPredicted RBP18.94■□□□□ 0.62
SPG7-201ENST00000268704 KLRF2D3W0D1 207 aa18.94■□□□□ 0.62
SPG7-201ENST00000268704 SHOX2O60902 331 aaPredicted RBP18.94■□□□□ 0.62
SPG7-201ENST00000268704 LRRC41Q15345 812 aa18.94■□□□□ 0.62
SPG7-201ENST00000268704 HAUS3Q68CZ6 603 aa18.94■□□□□ 0.62
SPG7-201ENST00000268704 IQCEQ6IPM2 695 aa18.94■□□□□ 0.62
SPG7-201ENST00000268704 GPATCH11Q8N954 259 aa18.94■□□□□ 0.62
SPG7-201ENST00000268704 DAGLBQ8NCG7 672 aa18.94■□□□□ 0.62
SPG7-201ENST00000268704 CCDC47Q96A33 483 aaKnown RBP18.94■□□□□ 0.62
SPG7-201ENST00000268704 ARL8AQ96BM9 186 aa18.94■□□□□ 0.62
SPG7-201ENST00000268704 BIN2Q9UBW5 565 aaPredicted RBP18.94■□□□□ 0.62
SPG7-201ENST00000268704 MYMKA6NI61 221 aa18.93■□□□□ 0.62
SPG7-201ENST00000268704 PRPHP41219 470 aa18.93■□□□□ 0.62
SPG7-201ENST00000268704 USP17L2Q6R6M4 530 aa18.93■□□□□ 0.62
SPG7-201ENST00000268704 MTMR8Q96EF0 704 aa18.93■□□□□ 0.62
SPG7-201ENST00000268704 RBM12Q9NTZ6 932 aaKnown RBP18.93■□□□□ 0.62
SPG7-201ENST00000268704 SMCO2A6NFE2 343 aa18.93■□□□□ 0.62
SPG7-201ENST00000268704 GTF2A1P52655 376 aaPredicted RBP18.93■□□□□ 0.62
SPG7-201ENST00000268704 RASSF7Q02833 373 aa18.93■□□□□ 0.62
SPG7-201ENST00000268704 CCDC181Q5TID7 509 aa18.93■□□□□ 0.62
SPG7-201ENST00000268704 CCDC70Q6NSX1 233 aa18.93■□□□□ 0.62
SPG7-201ENST00000268704 ZNF652Q9Y2D9 606 aa18.93■□□□□ 0.62
SPG7-201ENST00000268704 ESYT3A0FGR9 886 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 KCNQ2O43526 872 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 SLC1A4P43007 532 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 CDK17Q00537 523 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 TBCKQ8TEA7 893 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 TGFBRAP1Q8WUH2 860 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 LAD1O00515 517 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 APBA1Q02410 837 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 NONOQ15233 471 aaKnown RBP eCLIP18.92■□□□□ 0.623e-6■■■■□ 26.1
SPG7-201ENST00000268704 KCTD19Q17RG1 926 aaPredicted RBP18.92■□□□□ 0.62
SPG7-201ENST00000268704 FIGNQ5HY92 759 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 AMOTL1Q8IY63 956 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 SH2D3CQ8N5H7 860 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 NLRC4Q9NPP4 1024 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 CCDC88AQ3V6T2 1871 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 GRIN2DO15399 1336 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 PALM3A6NDB9 673 aaPredicted RBP18.92■□□□□ 0.62
SPG7-201ENST00000268704 RPS8P62241 208 aaKnown RBP18.92■□□□□ 0.62
SPG7-201ENST00000268704 GNGT1P63211 74 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 TTMPQ5BVD1 217 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 TBC1D9BQ66K14 1250 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 KCTD16Q68DU8 428 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 CENPPQ6IPU0 288 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 CNNM4Q6P4Q7 775 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 TMED8Q6PL24 325 aaPredicted RBP18.92■□□□□ 0.62
SPG7-201ENST00000268704 MAPKAPK5Q8IW41 473 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 ZMYND12Q9H0C1 365 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 CUEDC2Q9H467 287 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 BLOC1S4Q9NUP1 217 aa18.92■□□□□ 0.62
SPG7-201ENST00000268704 HSPA1LP34931 641 aa18.91■□□□□ 0.62
SPG7-201ENST00000268704 MAGEA1P43355 309 aa18.91■□□□□ 0.62
SPG7-201ENST00000268704 NAP1L1P55209 391 aaKnown RBP18.91■□□□□ 0.62
SPG7-201ENST00000268704 GRB10Q13322 594 aa18.91■□□□□ 0.62
SPG7-201ENST00000268704 NEK8Q86SG6 692 aa18.91■□□□□ 0.62
SPG7-201ENST00000268704 AK8Q96MA6 479 aa18.91■□□□□ 0.62
SPG7-201ENST00000268704 TLR10Q9BXR5 811 aa18.91■□□□□ 0.62
SPG7-201ENST00000268704 CAPS2Q9BXY5 557 aa18.91■□□□□ 0.62
SPG7-201ENST00000268704 KANSL2Q9H9L4 492 aa18.91■□□□□ 0.62
SPG7-201ENST00000268704 HYOU1Q9Y4L1 999 aa18.91■□□□□ 0.62
SPG7-201ENST00000268704 POTEMA6NI47 508 aa18.91■□□□□ 0.62
SPG7-201ENST00000268704 ZNF444Q8N0Y2 327 aaPredicted RBP18.91■□□□□ 0.62
SPG7-201ENST00000268704 BCAS4Q8TDM0 211 aa18.91■□□□□ 0.62
SPG7-201ENST00000268704 STIM2Q9P246 746 aa18.91■□□□□ 0.62
SPG7-201ENST00000268704 SAMM50Q9Y512 469 aa18.91■□□□□ 0.62
SPG7-201ENST00000268704 HNRNPH3P31942 346 aaKnown RBP18.9■□□□□ 0.62
SPG7-201ENST00000268704 GNAQP50148 359 aa18.9■□□□□ 0.62
SPG7-201ENST00000268704 BAP1Q92560 729 aa18.9■□□□□ 0.62
SPG7-201ENST00000268704 UIMC1Q96RL1 719 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms