RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 ELP3Q9H9T3 547 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 TLDC2A0PJX2 215 aa11.21□□□□□ -0.61
SMARCA1-205ENST00000617310 SFI1A8K8P3 1242 aa11.21□□□□□ -0.61
SMARCA1-205ENST00000617310 CLIC2O15247 247 aa11.21□□□□□ -0.61
SMARCA1-205ENST00000617310 MMP1P03956 469 aa11.21□□□□□ -0.61
SMARCA1-205ENST00000617310 CBX1P83916 185 aa11.21□□□□□ -0.61
SMARCA1-205ENST00000617310 PTF1AQ7RTS3 328 aa11.21□□□□□ -0.61
SMARCA1-205ENST00000617310 PCIF1Q9H4Z3 704 aa11.21□□□□□ -0.61
SMARCA1-205ENST00000617310 NRBP2Q9NSY0 501 aa11.21□□□□□ -0.61
SMARCA1-205ENST00000617310 COL4A3BPQ9Y5P4 624 aa11.21□□□□□ -0.61
SMARCA1-205ENST00000617310 IKBKGQ9Y6K9 419 aa11.21□□□□□ -0.61
SMARCA1-205ENST00000617310 MYO3BQ8WXR4 1341 aa11.21□□□□□ -0.61
SMARCA1-205ENST00000617310 GMPSP49915 693 aaPredicted RBP11.21□□□□□ -0.61
SMARCA1-205ENST00000617310 DMP1Q13316 513 aaPredicted RBP11.21□□□□□ -0.61
SMARCA1-205ENST00000617310 CTTNQ14247 550 aaKnown RBP11.21□□□□□ -0.61
SMARCA1-205ENST00000617310 LARP4BQ92615 738 aaKnown RBP11.21□□□□□ -0.61
SMARCA1-205ENST00000617310 ATP6V0A1Q93050 837 aa11.21□□□□□ -0.61
SMARCA1-205ENST00000617310 CRAMP1Q96RY5 1269 aa11.21□□□□□ -0.61
SMARCA1-205ENST00000617310 CEP170BQ9Y4F5 1589 aaPredicted RBP11.21□□□□□ -0.61
SMARCA1-205ENST00000617310 PSMD14O00487 310 aa11.21□□□□□ -0.62
SMARCA1-205ENST00000617310 ZRSR2Q15696 482 aaKnown RBP11.21□□□□□ -0.62
SMARCA1-205ENST00000617310 GALNT17Q6IS24 598 aa11.21□□□□□ -0.62
SMARCA1-205ENST00000617310 PIGOQ8TEQ8 1089 aa11.21□□□□□ -0.62
SMARCA1-205ENST00000617310 KIFAP3Q92845 792 aa11.21□□□□□ -0.62
SMARCA1-205ENST00000617310 TRIM31Q9BZY9 425 aa11.21□□□□□ -0.62
SMARCA1-205ENST00000617310 RNF146Q9NTX7 359 aa11.21□□□□□ -0.62
SMARCA1-205ENST00000617310 NUB1Q9Y5A7 615 aa11.21□□□□□ -0.62
SMARCA1-205ENST00000617310 KIAA0754O94854 1291 aa11.21□□□□□ -0.62
SMARCA1-205ENST00000617310 SRGAP2CP0DJJ0 459 aa11.21□□□□□ -0.62
SMARCA1-205ENST00000617310 ADAM9Q13443 819 aa11.21□□□□□ -0.62
SMARCA1-205ENST00000617310 PPP2R5DQ14738 602 aa11.21□□□□□ -0.62
SMARCA1-205ENST00000617310 TTBK2Q6IQ55 1244 aa11.21□□□□□ -0.62
SMARCA1-205ENST00000617310 TMTC3Q6ZXV5 915 aa11.21□□□□□ -0.62
SMARCA1-205ENST00000617310 NLRP4Q96MN2 994 aa11.21□□□□□ -0.62
SMARCA1-205ENST00000617310 FOXP1Q9H334 677 aaPredicted RBP11.21□□□□□ -0.62
SMARCA1-205ENST00000617310 CD163L1Q9NR16 1453 aa11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 TMEM191BP0C7N4 346 aa11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 CASP1P29466 404 aa11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 ANKRD13CQ8N6S4 541 aa11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 TMEM39BQ9GZU3 492 aa11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 BHMT2Q9H2M3 363 aa11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 POTEMA6NI47 508 aa11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 RPN1P04843 607 aaKnown RBP11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 SLC9C1Q4G0N8 1177 aa11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 TXNRD3Q86VQ6 643 aa11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 STAG2Q8N3U4 1231 aa11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 OXER1Q8TDS5 423 aa11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 STAG1Q8WVM7 1258 aa11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 LMBR1Q8WVP7 490 aa11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 SH2D3AQ9BRG2 576 aa11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 TMEM260Q9NX78 707 aa11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 AGTPBP1Q9UPW5 1226 aa11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 PNMA6FA0A0J9YX94 578 aa11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 KIF4AO95239 1232 aa11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 ZNF75DP51815 510 aa11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 TOB2Q14106 344 aaPredicted RBP11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 MRRFQ96E11 262 aaKnown RBP11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 NOX5Q96PH1 765 aa11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 DESI2Q9BSY9 194 aa11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 LSM14BQ9BX40 385 aaKnown RBP11.2□□□□□ -0.62
SMARCA1-205ENST00000617310 LAMC1P11047 1609 aa11.19□□□□□ -0.62
SMARCA1-205ENST00000617310 CDC27P30260 824 aa11.19□□□□□ -0.62
SMARCA1-205ENST00000617310 QRICH1Q2TAL8 776 aa11.19□□□□□ -0.62
SMARCA1-205ENST00000617310 FAM160B2Q86V87 743 aa11.19□□□□□ -0.62
SMARCA1-205ENST00000617310 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.19□□□□□ -0.62
SMARCA1-205ENST00000617310 PAIP2Q9BPZ3 127 aaKnown RBP11.19□□□□□ -0.62
SMARCA1-205ENST00000617310 PRPF3O43395 683 aaKnown RBP11.19□□□□□ -0.62
SMARCA1-205ENST00000617310 MORC3Q14149 939 aa11.19□□□□□ -0.62
SMARCA1-205ENST00000617310 LLGL1Q15334 1064 aa11.19□□□□□ -0.62
SMARCA1-205ENST00000617310 GPT2Q8TD30 523 aa11.19□□□□□ -0.62
SMARCA1-205ENST00000617310 MEGF6O75095 1541 aa11.19□□□□□ -0.62
SMARCA1-205ENST00000617310 KCNJ18B7U540 433 aa11.19□□□□□ -0.62
SMARCA1-205ENST00000617310 DAPK3O43293 454 aa11.19□□□□□ -0.62
SMARCA1-205ENST00000617310 GTPBP6O43824 516 aaPredicted RBP11.19□□□□□ -0.62
SMARCA1-205ENST00000617310 KCNJ12Q14500 433 aa11.19□□□□□ -0.62
SMARCA1-205ENST00000617310 FAM160B1Q5W0V3 765 aa11.19□□□□□ -0.62
SMARCA1-205ENST00000617310 HACE1Q8IYU2 909 aa11.19□□□□□ -0.62
SMARCA1-205ENST00000617310 LINC00301Q8NCQ3 95 aa11.19□□□□□ -0.62
SMARCA1-205ENST00000617310 TTC14Q96N46 770 aa11.19□□□□□ -0.62
SMARCA1-205ENST00000617310 PARP2Q9UGN5 583 aa11.19□□□□□ -0.62
SMARCA1-205ENST00000617310 CSF1RP07333 972 aa11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 LONP1P36776 959 aaKnown RBP11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 PRPHP41219 470 aa11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 MAP2K1Q02750 393 aaPredicted RBP11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 MTMR2Q13614 643 aa11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 STRIP1Q5VSL9 837 aa11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 STOX1Q6ZVD7 989 aa11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 SYNJ2BP-COX16A0A087WUM0 186 aa11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 IQCA1LA6NCM1 817 aa11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 NR2F2P24468 414 aa11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 CKAP4Q07065 602 aaKnown RBP11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 PPP1R7Q15435 360 aa11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 DPCR1Q3MIW9 517 aa11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 CCDC117Q8IWD4 279 aaPredicted RBP11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 ABI1Q8IZP0 508 aa11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 FAM193BQ96PV7 902 aaPredicted RBP11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 COX16Q9P0S2 106 aa11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 MST1RQ04912 1400 aa11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 ZBTB5O15062 677 aa11.18□□□□□ -0.62
SMARCA1-205ENST00000617310 PLCG1P19174 1290 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms