RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 GOLGA8AA7E2F4 631 aa20■□□□□ 0.79
SHKBP1-212ENST00000596163 GOLGA8BA8MQT2 603 aa20■□□□□ 0.79
SHKBP1-212ENST00000596163 PLEKHA8P1O95397 391 aa20■□□□□ 0.79
SHKBP1-212ENST00000596163 ZNF865P0CJ78 1059 aaPredicted RBP20■□□□□ 0.79
SHKBP1-212ENST00000596163 RARBP10826 455 aa20■□□□□ 0.79
SHKBP1-212ENST00000596163 SLC35G1Q2M3R5 365 aa20■□□□□ 0.79
SHKBP1-212ENST00000596163 TMTC3Q6ZXV5 915 aa20■□□□□ 0.79
SHKBP1-212ENST00000596163 NECAB2Q7Z6G3 386 aa20■□□□□ 0.79
SHKBP1-212ENST00000596163 RAB11FIP4Q86YS3 637 aa20■□□□□ 0.79
SHKBP1-212ENST00000596163 SRBD1Q8N5C6 995 aaKnown RBP20■□□□□ 0.79
SHKBP1-212ENST00000596163 ALDH5A1P51649 535 aaPredicted RBP19.99■□□□□ 0.79
SHKBP1-212ENST00000596163 APOBRQ0VD83 1088 aa19.99■□□□□ 0.79
SHKBP1-212ENST00000596163 SLC30A10Q6XR72 485 aa19.99■□□□□ 0.79
SHKBP1-212ENST00000596163 PIBF1Q8WXW3 757 aa19.99■□□□□ 0.79
SHKBP1-212ENST00000596163 HTATIP2Q9BUP3 242 aa19.99■□□□□ 0.79
SHKBP1-212ENST00000596163 AGXT2Q9BYV1 514 aa19.99■□□□□ 0.79
SHKBP1-212ENST00000596163 ZNFX1Q9P2E3 1918 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-212ENST00000596163 PPP1R11O60927 126 aaPredicted RBP19.98■□□□□ 0.79
SHKBP1-212ENST00000596163 CFBP00751 764 aa19.98■□□□□ 0.79
SHKBP1-212ENST00000596163 METAP2P50579 478 aaKnown RBP eCLIP19.98■□□□□ 0.79
SHKBP1-212ENST00000596163 SYTL5Q8TDW5 730 aaPredicted RBP19.98■□□□□ 0.79
SHKBP1-212ENST00000596163 MORC4Q8TE76 937 aa19.98■□□□□ 0.79
SHKBP1-212ENST00000596163 PDRG1Q9NUG6 133 aa19.98■□□□□ 0.79
SHKBP1-212ENST00000596163 GCOM1H8Y6P7 765 aaPredicted RBP19.97■□□□□ 0.79
SHKBP1-212ENST00000596163 POLR2MP0CAP2 368 aa19.97■□□□□ 0.79
SHKBP1-212ENST00000596163 GHRHRQ02643 423 aa19.97■□□□□ 0.79
SHKBP1-212ENST00000596163 PDE4DQ08499 809 aa19.97■□□□□ 0.79
SHKBP1-212ENST00000596163 UBE2Q1Q7Z7E8 422 aa19.97■□□□□ 0.79
SHKBP1-212ENST00000596163 CMTR1Q8N1G2 835 aaKnown RBP19.97■□□□□ 0.79
SHKBP1-212ENST00000596163 CCDC82Q8N4S0 544 aa19.97■□□□□ 0.79
SHKBP1-212ENST00000596163 NSUN6Q8TEA1 469 aaKnown RBP19.97■□□□□ 0.79
SHKBP1-212ENST00000596163 PAWRQ96IZ0 340 aaKnown RBP19.97■□□□□ 0.79
SHKBP1-212ENST00000596163 VTA1Q9NP79 307 aa19.97■□□□□ 0.79
SHKBP1-212ENST00000596163 CCDC144BQ3MJ40 725 aa19.96■□□□□ 0.79
SHKBP1-212ENST00000596163 IQSEC1Q6DN90 963 aa19.96■□□□□ 0.79
SHKBP1-212ENST00000596163 TBC1D5Q92609 795 aa19.96■□□□□ 0.79
SHKBP1-212ENST00000596163 PURBQ96QR8 312 aaKnown RBP19.96■□□□□ 0.79
SHKBP1-212ENST00000596163 IWS1Q96ST2 819 aa19.96■□□□□ 0.79
SHKBP1-212ENST00000596163 C11orf49Q9H6J7 331 aa19.96■□□□□ 0.79
SHKBP1-212ENST00000596163 SPC25Q9HBM1 224 aa19.96■□□□□ 0.79
SHKBP1-212ENST00000596163 XPNPEP3Q9NQH7 507 aa19.96■□□□□ 0.79
SHKBP1-212ENST00000596163 DNM1LO00429 736 aa19.95■□□□□ 0.78
SHKBP1-212ENST00000596163 DUSP11O75319 330 aaKnown RBP19.95■□□□□ 0.78
SHKBP1-212ENST00000596163 HSD17B4P51659 736 aa19.95■□□□□ 0.78
SHKBP1-212ENST00000596163 EVCP57679 992 aa19.95■□□□□ 0.78
SHKBP1-212ENST00000596163 ARHGEF16Q5VV41 709 aa19.95■□□□□ 0.78
SHKBP1-212ENST00000596163 ANO1Q5XXA6 986 aa19.95■□□□□ 0.78
SHKBP1-212ENST00000596163 RNF180Q86T96 592 aa19.95■□□□□ 0.78
SHKBP1-212ENST00000596163 CUL5Q93034 780 aa19.95■□□□□ 0.78
SHKBP1-212ENST00000596163 RMDN3Q96TC7 470 aa19.95■□□□□ 0.78
SHKBP1-212ENST00000596163 UPF3BQ9BZI7 483 aaKnown RBP19.95■□□□□ 0.78
SHKBP1-212ENST00000596163 CENPFP49454 3210 aa19.95■□□□□ 0.78
SHKBP1-212ENST00000596163 KBTBD13C9JR72 458 aa19.94■□□□□ 0.78
SHKBP1-212ENST00000596163 TNFAIP2Q03169 654 aa19.94■□□□□ 0.78
SHKBP1-212ENST00000596163 TAAR1Q96RJ0 339 aa19.94■□□□□ 0.78
SHKBP1-212ENST00000596163 KATNBL1Q9H079 304 aa19.94■□□□□ 0.78
SHKBP1-212ENST00000596163 ALDH8A1Q9H2A2 487 aaPredicted RBP19.94■□□□□ 0.78
SHKBP1-212ENST00000596163 RBM27Q9P2N5 1060 aaKnown RBP19.94■□□□□ 0.78
SHKBP1-212ENST00000596163 ASTN1O14525 1302 aa19.94■□□□□ 0.78
SHKBP1-212ENST00000596163 PLXNA1Q9UIW2 1896 aa19.93■□□□□ 0.78
SHKBP1-212ENST00000596163 hCG_1984214I3L0E3 225 aa19.93■□□□□ 0.78
SHKBP1-212ENST00000596163 OPLAHO14841 1288 aa19.93■□□□□ 0.78
SHKBP1-212ENST00000596163 MYCNP04198 464 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-212ENST00000596163 EDNRBP24530 442 aa19.93■□□□□ 0.78
SHKBP1-212ENST00000596163 PDIA3P30101 505 aaKnown RBP19.93■□□□□ 0.78
SHKBP1-212ENST00000596163 CDC27P30260 824 aa19.93■□□□□ 0.78
SHKBP1-212ENST00000596163 ANKRD1Q15327 319 aa19.93■□□□□ 0.78
SHKBP1-212ENST00000596163 C8orf34Q49A92 452 aa19.93■□□□□ 0.78
SHKBP1-212ENST00000596163 NOL8Q76FK4 1167 aaKnown RBP19.93■□□□□ 0.78
SHKBP1-212ENST00000596163 EEPD1Q7L9B9 569 aa19.93■□□□□ 0.78
SHKBP1-212ENST00000596163 ZNF713Q8N859 430 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-212ENST00000596163 IL17RAQ96F46 866 aa19.93■□□□□ 0.78
SHKBP1-212ENST00000596163 ZNF274Q96GC6 653 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-212ENST00000596163 FAM217BQ9NTX9 383 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-212ENST00000596163 V9GY48 417 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-212ENST00000596163 SEC24BO95487 1268 aa19.92■□□□□ 0.78
SHKBP1-212ENST00000596163 ADD1P35611 737 aaKnown RBP19.92■□□□□ 0.78
SHKBP1-212ENST00000596163 MNX1P50219 401 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-212ENST00000596163 AKAP17AQ02040 695 aaKnown RBP19.92■□□□□ 0.78
SHKBP1-212ENST00000596163 TOB2Q14106 344 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-212ENST00000596163 LRRC41Q15345 812 aa19.92■□□□□ 0.78
SHKBP1-212ENST00000596163 STXBP2Q15833 593 aa19.92■□□□□ 0.78
SHKBP1-212ENST00000596163 GJC2Q5T442 439 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-212ENST00000596163 TEX2Q8IWB9 1127 aa19.92■□□□□ 0.78
SHKBP1-212ENST00000596163 FBXO16Q8IX29 292 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-212ENST00000596163 DIS3LQ8TF46 1054 aaKnown RBP19.92■□□□□ 0.78
SHKBP1-212ENST00000596163 DPF3Q92784 378 aa19.92■□□□□ 0.78
SHKBP1-212ENST00000596163 COL20A1Q9P218 1284 aa19.92■□□□□ 0.78
SHKBP1-212ENST00000596163 CNTNAP5Q8WYK1 1306 aa19.92■□□□□ 0.78
SHKBP1-212ENST00000596163 NID2Q14112 1375 aa19.92■□□□□ 0.78
SHKBP1-212ENST00000596163 HOXA13P31271 388 aaPredicted RBP19.91■□□□□ 0.78
SHKBP1-212ENST00000596163 ADCYAP1R1P41586 468 aa19.91■□□□□ 0.78
SHKBP1-212ENST00000596163 FUT2Q10981 343 aa19.91■□□□□ 0.78
SHKBP1-212ENST00000596163 TAPT1Q6NXT6 567 aa19.91■□□□□ 0.78
SHKBP1-212ENST00000596163 CPLX2Q6PUV4 134 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-212ENST00000596163 HEATR3Q7Z4Q2 680 aa19.91■□□□□ 0.78
SHKBP1-212ENST00000596163 SMARCC2Q8TAQ2 1214 aa19.91■□□□□ 0.78
SHKBP1-212ENST00000596163 AP5M1Q9H0R1 490 aa19.91■□□□□ 0.78
SHKBP1-212ENST00000596163 PSTPIP2Q9H939 334 aa19.91■□□□□ 0.78
SHKBP1-212ENST00000596163 PXMP2Q9NR77 195 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms