RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 HAUS4Q9H6D7 363 aa12.86□□□□□ -0.35
DDB1-224ENST00000545894 ABCF2Q9UG63 623 aa12.86□□□□□ -0.35
DDB1-224ENST00000545894 GUCA1BQ9UMX6 200 aa12.86□□□□□ -0.35
DDB1-224ENST00000545894 REXO2Q9Y3B8 237 aaKnown RBP12.86□□□□□ -0.35
DDB1-224ENST00000545894 CNTNAP5Q8WYK1 1306 aa12.86□□□□□ -0.35
DDB1-224ENST00000545894 MCM3P25205 808 aa12.86□□□□□ -0.35
DDB1-224ENST00000545894 SRLQ86TD4 932 aa12.86□□□□□ -0.35
DDB1-224ENST00000545894 TBC1D22AQ8WUA7 517 aa12.86□□□□□ -0.35
DDB1-224ENST00000545894 GJA3Q9Y6H8 435 aa12.86□□□□□ -0.35
DDB1-224ENST00000545894 LRRIQ3A6PVS8 624 aaPredicted RBP12.85□□□□□ -0.35
DDB1-224ENST00000545894 PARP1P09874 1014 aaKnown RBP12.85□□□□□ -0.35
DDB1-224ENST00000545894 PCP11498 1178 aaKnown RBP12.85□□□□□ -0.35
DDB1-224ENST00000545894 PRDX5P30044 214 aa12.85□□□□□ -0.35
DDB1-224ENST00000545894 MCM7P33993 719 aa12.85□□□□□ -0.35
DDB1-224ENST00000545894 PRCPP42785 496 aa12.85□□□□□ -0.35
DDB1-224ENST00000545894 NLRP5P59047 1200 aa12.85□□□□□ -0.35
DDB1-224ENST00000545894 FKBP1AP62942 108 aaKnown RBP12.85□□□□□ -0.35
DDB1-224ENST00000545894 IL17AQ16552 155 aa12.85□□□□□ -0.35
DDB1-224ENST00000545894 PIK3AP1Q6ZUJ8 805 aa12.85□□□□□ -0.35
DDB1-224ENST00000545894 GMLQ99445 158 aa12.85□□□□□ -0.35
DDB1-224ENST00000545894 VIPAS39Q9H9C1 493 aa12.85□□□□□ -0.35
DDB1-224ENST00000545894 LCMT1Q9UIC8 334 aa12.85□□□□□ -0.35
DDB1-224ENST00000545894 TTC26A0AVF1 554 aa12.85□□□□□ -0.35
DDB1-224ENST00000545894 USP14P54578 494 aa12.85□□□□□ -0.35
DDB1-224ENST00000545894 MB21D1Q8N884 522 aa12.85□□□□□ -0.35
DDB1-224ENST00000545894 CTCFLQ8NI51 663 aaPredicted RBP12.85□□□□□ -0.35
DDB1-224ENST00000545894 DNAJC7Q99615 494 aa12.85□□□□□ -0.35
DDB1-224ENST00000545894 RIOK1Q9BRS2 568 aaKnown RBP12.85□□□□□ -0.35
DDB1-224ENST00000545894 TRIM34Q9BYJ4 488 aa12.85□□□□□ -0.35
DDB1-224ENST00000545894 TRIM10Q9UDY6 481 aa12.85□□□□□ -0.35
DDB1-224ENST00000545894 GDAQ9Y2T3 454 aa12.85□□□□□ -0.35
DDB1-224ENST00000545894 LUC7L2Q9Y383 392 aaKnown RBP12.85□□□□□ -0.35
DDB1-224ENST00000545894 RRP15Q9Y3B9 282 aaKnown RBP12.85□□□□□ -0.35
DDB1-224ENST00000545894 DICER1Q9UPY3 1922 aaKnown RBP12.84□□□□□ -0.35
DDB1-224ENST00000545894 A0A1W2PQC6 194 aa12.84□□□□□ -0.35
DDB1-224ENST00000545894 LGALS16A8MUM7 142 aa12.84□□□□□ -0.35
DDB1-224ENST00000545894 F8W031 263 aaPredicted RBP12.84□□□□□ -0.35
DDB1-224ENST00000545894 DDNO94850 711 aaPredicted RBP12.84□□□□□ -0.35
DDB1-224ENST00000545894 FGRP09769 529 aa12.84□□□□□ -0.35
DDB1-224ENST00000545894 LONP1P36776 959 aaKnown RBP12.84□□□□□ -0.35
DDB1-224ENST00000545894 TSR1Q2NL82 804 aaKnown RBP12.84□□□□□ -0.35
DDB1-224ENST00000545894 MAP9Q49MG5 647 aa12.84□□□□□ -0.35
DDB1-224ENST00000545894 ARL6IP4Q66PJ3 421 aaKnown RBP12.84□□□□□ -0.35
DDB1-224ENST00000545894 SRBD1Q8N5C6 995 aaKnown RBP12.84□□□□□ -0.35
DDB1-224ENST00000545894 ZBTB9Q96C00 473 aa12.84□□□□□ -0.35
DDB1-224ENST00000545894 MAPK8IP1Q9UQF2 711 aa12.84□□□□□ -0.35
DDB1-224ENST00000545894 ZNF646O15015 1829 aaPredicted RBP12.84□□□□□ -0.35
DDB1-224ENST00000545894 CYP2D7A0A087X1C5 515 aa12.83□□□□□ -0.35
DDB1-224ENST00000545894 PHACTR2O75167 634 aa12.83□□□□□ -0.35
DDB1-224ENST00000545894 LDHBP07195 334 aaKnown RBP12.83□□□□□ -0.35
DDB1-224ENST00000545894 SCG2P13521 617 aa12.83□□□□□ -0.35
DDB1-224ENST00000545894 EEF1GP26641 437 aaKnown RBP12.83□□□□□ -0.35
DDB1-224ENST00000545894 AARSP49588 968 aaKnown RBP eCLIP12.83□□□□□ -0.35
DDB1-224ENST00000545894 IRF2BP1Q8IU81 584 aa12.83□□□□□ -0.35
DDB1-224ENST00000545894 KIAA0825Q8IV33 1275 aa12.83□□□□□ -0.35
DDB1-224ENST00000545894 C10orf67Q8IYJ2 551 aa12.83□□□□□ -0.35
DDB1-224ENST00000545894 ADSSL1Q8N142 457 aa12.83□□□□□ -0.35
DDB1-224ENST00000545894 ZNF384Q8TF68 577 aa12.83□□□□□ -0.35
DDB1-224ENST00000545894 CAPN11Q9UMQ6 739 aa12.83□□□□□ -0.35
DDB1-224ENST00000545894 SAR1BQ9Y6B6 198 aa12.83□□□□□ -0.35
DDB1-224ENST00000545894 MYH8P13535 1937 aa12.83□□□□□ -0.36
DDB1-224ENST00000545894 TRIM66O15016 1216 aa12.83□□□□□ -0.36
DDB1-224ENST00000545894 STAT6P42226 847 aa12.83□□□□□ -0.36
DDB1-224ENST00000545894 GMPSP49915 693 aaPredicted RBP12.83□□□□□ -0.36
DDB1-224ENST00000545894 HERVK_113P62684 666 aa12.83□□□□□ -0.36
DDB1-224ENST00000545894 KRT83P78385 493 aa12.83□□□□□ -0.36
DDB1-224ENST00000545894 CCDC122Q5T0U0 273 aa12.83□□□□□ -0.36
DDB1-224ENST00000545894 PAPD7Q5XG87 772 aaKnown RBP12.83□□□□□ -0.36
DDB1-224ENST00000545894 SPTY2D1Q68D10 685 aaPredicted RBP12.83□□□□□ -0.36
DDB1-224ENST00000545894 ZNF662Q6ZS27 426 aa12.83□□□□□ -0.36
DDB1-224ENST00000545894 GPC2Q8N158 579 aa12.83□□□□□ -0.36
DDB1-224ENST00000545894 EHBP1Q8NDI1 1231 aa12.83□□□□□ -0.36
DDB1-224ENST00000545894 AGBL3Q8NEM8 1001 aa12.83□□□□□ -0.36
DDB1-224ENST00000545894 RPGRIP1Q96KN7 1286 aa12.83□□□□□ -0.36
DDB1-224ENST00000545894 MKRN1Q9UHC7 482 aaKnown RBP12.83□□□□□ -0.36
DDB1-224ENST00000545894 ZC3H4Q9UPT8 1303 aaKnown RBP12.82□□□□□ -0.36
DDB1-224ENST00000545894 SHTN1A0MZ66 631 aa12.82□□□□□ -0.36
DDB1-224ENST00000545894 TARSL2A2RTX5 802 aaKnown RBP12.82□□□□□ -0.36
DDB1-224ENST00000545894 TRIM49BA6NDI0 452 aa12.82□□□□□ -0.36
DDB1-224ENST00000545894 ENC1O14682 589 aa12.82□□□□□ -0.36
DDB1-224ENST00000545894 ATP1A1P05023 1023 aaKnown RBP12.82□□□□□ -0.36
DDB1-224ENST00000545894 MECOMQ03112 1051 aa12.82□□□□□ -0.36
DDB1-224ENST00000545894 CKAP4Q07065 602 aaKnown RBP12.82□□□□□ -0.36
DDB1-224ENST00000545894 GOLGA6L1Q8N7Z2 621 aa12.82□□□□□ -0.36
DDB1-224ENST00000545894 ZNF507Q8TCN5 953 aa12.82□□□□□ -0.36
DDB1-224ENST00000545894 MMS19Q96T76 1030 aa12.82□□□□□ -0.36
DDB1-224ENST00000545894 THAP9Q9H5L6 903 aa12.82□□□□□ -0.36
DDB1-224ENST00000545894 FAM204AQ9H8W3 233 aa12.82□□□□□ -0.36
DDB1-224ENST00000545894 HDAC6Q9UBN7 1215 aa12.82□□□□□ -0.36
DDB1-224ENST00000545894 SUGT1Q9Y2Z0 365 aa12.82□□□□□ -0.36
DDB1-224ENST00000545894 MYO3BQ8WXR4 1341 aa12.82□□□□□ -0.36
DDB1-224ENST00000545894 VGLL3A8MV65 326 aa12.82□□□□□ -0.36
DDB1-224ENST00000545894 DYNLL1P63167 89 aaKnown RBP12.82□□□□□ -0.36
DDB1-224ENST00000545894 PFKFB3Q16875 520 aaPredicted RBP12.82□□□□□ -0.36
DDB1-224ENST00000545894 DPY19L2Q6NUT2 758 aa12.82□□□□□ -0.36
DDB1-224ENST00000545894 WDR59Q6PJI9 974 aa12.82□□□□□ -0.36
DDB1-224ENST00000545894 NSUN4Q96CB9 384 aaKnown RBP12.82□□□□□ -0.36
DDB1-224ENST00000545894 MYH2Q9UKX2 1941 aa12.81□□□□□ -0.36
DDB1-224ENST00000545894 GLTPD2A6NH11 291 aa12.81□□□□□ -0.36
DDB1-224ENST00000545894 PES1O00541 588 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms