RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 DSCC1Q9BVC3 393 aa4.74□□□□□ -1.65
COPB1-205ENST00000526527 SLC12A9Q9BXP2 914 aa4.74□□□□□ -1.65
COPB1-205ENST00000526527 SUCOQ9UBS9 1254 aaKnown RBP4.74□□□□□ -1.65
COPB1-205ENST00000526527 UNCXA6NJT0 531 aa4.73□□□□□ -1.65
COPB1-205ENST00000526527 DBHP09172 617 aa4.73□□□□□ -1.65
COPB1-205ENST00000526527 ACRP10323 421 aa4.73□□□□□ -1.65
COPB1-205ENST00000526527 TBC1D10BQ4KMP7 808 aaPredicted RBP4.73□□□□□ -1.65
COPB1-205ENST00000526527 HLA-DQA1Q5Y7H0 255 aa4.73□□□□□ -1.65
COPB1-205ENST00000526527 SLITRK4Q8IW52 837 aa4.73□□□□□ -1.65
COPB1-205ENST00000526527 CCDC144CPQ8IYA2 1237 aa4.73□□□□□ -1.65
COPB1-205ENST00000526527 C7orf61Q8IZ16 206 aa4.73□□□□□ -1.65
COPB1-205ENST00000526527 NKD1Q969G9 470 aa4.73□□□□□ -1.65
COPB1-205ENST00000526527 PCED1AQ9H1Q7 454 aa4.73□□□□□ -1.65
COPB1-205ENST00000526527 CCSER2Q9H7U1 834 aa4.73□□□□□ -1.65
COPB1-205ENST00000526527 KIAA1522Q9P206 1035 aaPredicted RBP4.73□□□□□ -1.65
COPB1-205ENST00000526527 H0Y8X5 98 aa4.72□□□□□ -1.65
COPB1-205ENST00000526527 CYBBP04839 570 aa4.72□□□□□ -1.65
COPB1-205ENST00000526527 FANCCQ00597 558 aa4.72□□□□□ -1.65
COPB1-205ENST00000526527 TDRD10Q5VZ19 366 aaKnown RBP4.72□□□□□ -1.65
COPB1-205ENST00000526527 PAQR3Q6TCH7 311 aa4.72□□□□□ -1.65
COPB1-205ENST00000526527 USP48Q86UV5 1035 aa4.72□□□□□ -1.65
COPB1-205ENST00000526527 JAMLQ86YT9 394 aa4.72□□□□□ -1.65
COPB1-205ENST00000526527 SPATA32Q96LK8 384 aa4.72□□□□□ -1.65
COPB1-205ENST00000526527 NT5C1AQ9BXI3 368 aa4.72□□□□□ -1.65
COPB1-205ENST00000526527 SRRTQ9BXP5 876 aaKnown RBP4.72□□□□□ -1.65
COPB1-205ENST00000526527 WDR26Q9H7D7 661 aa4.72□□□□□ -1.65
COPB1-205ENST00000526527 FGF10O15520 208 aaPredicted RBP4.71□□□□□ -1.66
COPB1-205ENST00000526527 SRGAP3O43295 1099 aa4.71□□□□□ -1.66
COPB1-205ENST00000526527 HMGB1P09429 215 aaKnown RBP4.71□□□□□ -1.66
COPB1-205ENST00000526527 ERCC5P28715 1186 aaPredicted RBP4.71□□□□□ -1.66
COPB1-205ENST00000526527 SARSP49591 514 aaKnown RBP4.71□□□□□ -1.66
COPB1-205ENST00000526527 DCAF15Q66K64 600 aa4.71□□□□□ -1.66
COPB1-205ENST00000526527 INTS3Q68E01 1043 aaKnown RBP4.71□□□□□ -1.66
COPB1-205ENST00000526527 CWF19L1Q69YN2 538 aaKnown RBP4.71□□□□□ -1.66
COPB1-205ENST00000526527 BICRALQ6AI39 1079 aa4.71□□□□□ -1.66
COPB1-205ENST00000526527 PPFIBP1Q86W92 1011 aa4.71□□□□□ -1.66
COPB1-205ENST00000526527 ZNF654Q8IZM8 581 aa4.71□□□□□ -1.66
COPB1-205ENST00000526527 BRF1Q92994 677 aa4.71□□□□□ -1.66
COPB1-205ENST00000526527 ZNF428Q96B54 188 aa4.71□□□□□ -1.66
COPB1-205ENST00000526527 DHRS1Q96LJ7 313 aa4.71□□□□□ -1.66
COPB1-205ENST00000526527 ZNF747Q9BV97 191 aa4.71□□□□□ -1.66
COPB1-205ENST00000526527 SSBP3Q9BWW4 388 aaPredicted RBP4.71□□□□□ -1.66
COPB1-205ENST00000526527 RNF38Q9H0F5 515 aa4.71□□□□□ -1.66
COPB1-205ENST00000526527 FAN1Q9Y2M0 1017 aa4.71□□□□□ -1.66
COPB1-205ENST00000526527 TSC22D4Q9Y3Q8 395 aa4.71□□□□□ -1.66
COPB1-205ENST00000526527 A0A1W2PQJ5 194 aa4.7□□□□□ -1.66
COPB1-205ENST00000526527 F8W031 263 aaPredicted RBP4.7□□□□□ -1.66
COPB1-205ENST00000526527 NCAM1P13591 858 aa4.7□□□□□ -1.66
COPB1-205ENST00000526527 TGM1P22735 817 aa4.7□□□□□ -1.66
COPB1-205ENST00000526527 TACR1P25103 407 aa4.7□□□□□ -1.66
COPB1-205ENST00000526527 PMS1P54277 932 aaKnown RBP4.7□□□□□ -1.66
COPB1-205ENST00000526527 ZNF445P59923 1031 aa4.7□□□□□ -1.66
COPB1-205ENST00000526527 PRR5P85299 388 aa4.7□□□□□ -1.66
COPB1-205ENST00000526527 CDSNQ15517 529 aa4.7□□□□□ -1.66
COPB1-205ENST00000526527 NOL9Q5SY16 702 aaKnown RBP4.7□□□□□ -1.66
COPB1-205ENST00000526527 CYP2R1Q6VVX0 501 aa4.7□□□□□ -1.66
COPB1-205ENST00000526527 ZNF761Q86XN6 746 aaPredicted RBP4.7□□□□□ -1.66
COPB1-205ENST00000526527 KIAA0825Q8IV33 1275 aa4.7□□□□□ -1.66
COPB1-205ENST00000526527 TGIF2Q9GZN2 237 aa4.7□□□□□ -1.66
COPB1-205ENST00000526527 GP6Q9HCN6 339 aa4.7□□□□□ -1.66
COPB1-205ENST00000526527 PDLIM7Q9NR12 457 aa4.7□□□□□ -1.66
COPB1-205ENST00000526527 ST6GALNAC2Q9UJ37 374 aa4.7□□□□□ -1.66
COPB1-205ENST00000526527 MC3RP41968 323 aa4.69□□□□□ -1.66
COPB1-205ENST00000526527 ANKRD39Q53RE8 183 aa4.69□□□□□ -1.66
COPB1-205ENST00000526527 AXDND1Q5T1B0 1012 aaPredicted RBP4.69□□□□□ -1.66
COPB1-205ENST00000526527 NT5DC4Q86YG4 428 aa4.69□□□□□ -1.66
COPB1-205ENST00000526527 FCRL3Q96P31 734 aaPredicted RBP4.69□□□□□ -1.66
COPB1-205ENST00000526527 VPS11Q9H270 941 aa4.69□□□□□ -1.66
COPB1-205ENST00000526527 FAM86C1Q9NVL1 165 aa4.69□□□□□ -1.66
COPB1-205ENST00000526527 ZNRF3Q9ULT6 936 aa4.69□□□□□ -1.66
COPB1-205ENST00000526527 CDK11AQ9UQ88 783 aaPredicted RBP4.69□□□□□ -1.66
COPB1-205ENST00000526527 AMHP03971 560 aa4.68□□□□□ -1.66
COPB1-205ENST00000526527 TP53P04637 393 aaPredicted RBP4.68□□□□□ -1.66
COPB1-205ENST00000526527 ASGR2P07307 311 aa4.68□□□□□ -1.66
COPB1-205ENST00000526527 IFNGR1P15260 489 aa4.68□□□□□ -1.66
COPB1-205ENST00000526527 NOP2P46087 812 aaKnown RBP4.68□□□□□ -1.66
COPB1-205ENST00000526527 ZC3H6P61129 1189 aaKnown RBP4.68□□□□□ -1.66
COPB1-205ENST00000526527 HDLBPQ00341 1268 aaKnown RBP4.68□□□□□ -1.66
COPB1-205ENST00000526527 B3GNT8Q7Z7M8 397 aa4.68□□□□□ -1.66
COPB1-205ENST00000526527 VPS37DQ86XT2 251 aa4.68□□□□□ -1.66
COPB1-205ENST00000526527 FIBCD1Q8N539 461 aa4.68□□□□□ -1.66
COPB1-205ENST00000526527 SMARCC1Q92922 1105 aaPredicted RBP4.68□□□□□ -1.66
COPB1-205ENST00000526527 KISS1RQ969F8 398 aaPredicted RBP4.68□□□□□ -1.66
COPB1-205ENST00000526527 PTCHD1Q96NR3 888 aa4.68□□□□□ -1.66
COPB1-205ENST00000526527 SPON2Q9BUD6 331 aa4.68□□□□□ -1.66
COPB1-205ENST00000526527 CAPN10Q9HC96 672 aa4.68□□□□□ -1.66
COPB1-205ENST00000526527 SPATA6Q9NWH7 488 aaPredicted RBP4.68□□□□□ -1.66
COPB1-205ENST00000526527 DBR1Q9UK59 544 aaKnown RBP4.68□□□□□ -1.66
COPB1-205ENST00000526527 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.68□□□□□ -1.66
COPB1-205ENST00000526527 ZNF451Q9Y4E5 1061 aa4.68□□□□□ -1.66
COPB1-205ENST00000526527 CD3EP07766 207 aa4.67□□□□□ -1.66
COPB1-205ENST00000526527 CD247P20963 164 aa4.67□□□□□ -1.66
COPB1-205ENST00000526527 CORO7P57737 925 aa4.67□□□□□ -1.66
COPB1-205ENST00000526527 KLF10Q13118 480 aa4.67□□□□□ -1.66
COPB1-205ENST00000526527 COL9A2Q14055 689 aaPredicted RBP4.67□□□□□ -1.66
COPB1-205ENST00000526527 ZYXQ15942 572 aaKnown RBP4.67□□□□□ -1.66
COPB1-205ENST00000526527 TAB3Q8N5C8 712 aaPredicted RBP4.67□□□□□ -1.66
COPB1-205ENST00000526527 NLGN2Q8NFZ4 835 aa4.67□□□□□ -1.66
COPB1-205ENST00000526527 NOL6Q9H6R4 1146 aaKnown RBP4.67□□□□□ -1.66
COPB1-205ENST00000526527 BCAS3Q9H6U6 928 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms