RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 LSG1Q9H089 658 aaKnown RBP16.36■□□□□ 0.21
VTI1A-206ENST00000489142 SPC25Q9HBM1 224 aa16.36■□□□□ 0.21
VTI1A-206ENST00000489142 ADD3Q9UEY8 706 aaKnown RBP16.36■□□□□ 0.21
VTI1A-206ENST00000489142 GNEQ9Y223 722 aaKnown RBP16.36■□□□□ 0.21
VTI1A-206ENST00000489142 MOXD2PA6NHM9 499 aa16.35■□□□□ 0.21
VTI1A-206ENST00000489142 DYNC1LI2O43237 492 aaPredicted RBP16.35■□□□□ 0.21
VTI1A-206ENST00000489142 ITGB8P26012 769 aa16.35■□□□□ 0.21
VTI1A-206ENST00000489142 CST5P28325 142 aaPredicted RBP16.35■□□□□ 0.21
VTI1A-206ENST00000489142 KIAA1211Q6ZU35 1233 aa16.35■□□□□ 0.21
VTI1A-206ENST00000489142 MORC4Q8TE76 937 aa16.35■□□□□ 0.21
VTI1A-206ENST00000489142 NUP133Q8WUM0 1156 aa16.35■□□□□ 0.21
VTI1A-206ENST00000489142 BADQ92934 168 aa16.35■□□□□ 0.21
VTI1A-206ENST00000489142 GPHNQ9NQX3 736 aaPredicted RBP16.35■□□□□ 0.21
VTI1A-206ENST00000489142 MAD2L2Q9UI95 211 aa16.35■□□□□ 0.21
VTI1A-206ENST00000489142 ERICH2A1L162 156 aa16.34■□□□□ 0.21
VTI1A-206ENST00000489142 KLRF2D3W0D1 207 aa16.34■□□□□ 0.21
VTI1A-206ENST00000489142 CLTBP09497 229 aa16.34■□□□□ 0.21
VTI1A-206ENST00000489142 WTAPQ15007 396 aa16.34■□□□□ 0.21
VTI1A-206ENST00000489142 SLC35G1Q2M3R5 365 aa16.34■□□□□ 0.21
VTI1A-206ENST00000489142 TMEM67Q5HYA8 995 aa16.34■□□□□ 0.21
VTI1A-206ENST00000489142 C1orf53Q5VUE5 145 aa16.34■□□□□ 0.21
VTI1A-206ENST00000489142 FBXO11Q86XK2 927 aa16.34■□□□□ 0.21
VTI1A-206ENST00000489142 MB21D2Q8IYB1 491 aaPredicted RBP16.34■□□□□ 0.21
VTI1A-206ENST00000489142 PCSK9Q8NBP7 692 aaKnown RBP16.34■□□□□ 0.21
VTI1A-206ENST00000489142 VTA1Q9NP79 307 aa16.34■□□□□ 0.21
VTI1A-206ENST00000489142 ANO2Q9NQ90 1003 aa16.34■□□□□ 0.21
VTI1A-206ENST00000489142 COL20A1Q9P218 1284 aa16.34■□□□□ 0.21
VTI1A-206ENST00000489142 PNMA2Q9UL42 364 aa16.34■□□□□ 0.21
VTI1A-206ENST00000489142 ABCB11O95342 1321 aa16.34■□□□□ 0.21
VTI1A-206ENST00000489142 PPP1R11O60927 126 aaPredicted RBP16.33■□□□□ 0.2
VTI1A-206ENST00000489142 PDE4DQ08499 809 aa16.33■□□□□ 0.2
VTI1A-206ENST00000489142 GRM4Q14833 912 aa16.33■□□□□ 0.2
VTI1A-206ENST00000489142 FSCN1Q16658 493 aaKnown RBP16.33■□□□□ 0.2
VTI1A-206ENST00000489142 CXCL17Q6UXB2 119 aa16.33■□□□□ 0.2
VTI1A-206ENST00000489142 HOMER1Q86YM7 354 aa16.33■□□□□ 0.2
VTI1A-206ENST00000489142 PIBF1Q8WXW3 757 aa16.33■□□□□ 0.2
VTI1A-206ENST00000489142 GLT1D1Q96MS3 346 aa16.33■□□□□ 0.2
VTI1A-206ENST00000489142 MYL10Q9BUA6 226 aa16.33■□□□□ 0.2
VTI1A-206ENST00000489142 AP5M1Q9H0R1 490 aa16.33■□□□□ 0.2
VTI1A-206ENST00000489142 PALM3A6NDB9 673 aaPredicted RBP16.32■□□□□ 0.2
VTI1A-206ENST00000489142 SLC27A2O14975 620 aa16.32■□□□□ 0.2
VTI1A-206ENST00000489142 FAAP100Q0VG06 881 aa16.32■□□□□ 0.2
VTI1A-206ENST00000489142 SART3Q15020 963 aaKnown RBP16.32■□□□□ 0.2
VTI1A-206ENST00000489142 BMP2KLQ5H9B9 411 aa16.32■□□□□ 0.2
VTI1A-206ENST00000489142 KIAA1217Q5T5P2 1943 aa16.32■□□□□ 0.2
VTI1A-206ENST00000489142 IQSEC1Q6DN90 963 aa16.32■□□□□ 0.2
VTI1A-206ENST00000489142 SYTL5Q8TDW5 730 aaPredicted RBP16.32■□□□□ 0.2
VTI1A-206ENST00000489142 TAAR1Q96RJ0 339 aa16.32■□□□□ 0.2
VTI1A-206ENST00000489142 WDR11Q9BZH6 1224 aa16.32■□□□□ 0.2
VTI1A-206ENST00000489142 LAMA2P24043 3122 aaKnown RBP16.31■□□□□ 0.2
VTI1A-206ENST00000489142 OPLAHO14841 1288 aa16.31■□□□□ 0.2
VTI1A-206ENST00000489142 PSMC6P62333 389 aa16.31■□□□□ 0.2
VTI1A-206ENST00000489142 C9orf50Q5SZB4 431 aa16.31■□□□□ 0.2
VTI1A-206ENST00000489142 CREB3L3Q68CJ9 461 aa16.31■□□□□ 0.2
VTI1A-206ENST00000489142 ANKRD33Q7Z3H0 272 aa16.31■□□□□ 0.2
VTI1A-206ENST00000489142 IGDCC4Q8TDY8 1250 aa16.31■□□□□ 0.2
VTI1A-206ENST00000489142 COPS5Q92905 334 aa16.31■□□□□ 0.2
VTI1A-206ENST00000489142 CCDC136Q96JN2 1154 aa16.31■□□□□ 0.2
VTI1A-206ENST00000489142 PIGSQ96S52 555 aa16.31■□□□□ 0.2
VTI1A-206ENST00000489142 LY9Q9HBG7 655 aa16.31■□□□□ 0.2
VTI1A-206ENST00000489142 TMEM39AQ9NV64 488 aa16.31■□□□□ 0.2
VTI1A-206ENST00000489142 MRPL11Q9Y3B7 192 aaKnown RBP16.31■□□□□ 0.2
VTI1A-206ENST00000489142 ELP1O95163 1332 aa16.3■□□□□ 0.2
VTI1A-206ENST00000489142 A0A0U1RQG5 324 aaPredicted RBP16.3■□□□□ 0.2
VTI1A-206ENST00000489142 DCDC2CA8MYV0 355 aa16.3■□□□□ 0.2
VTI1A-206ENST00000489142 ZBTB5O15062 677 aa16.3■□□□□ 0.2
VTI1A-206ENST00000489142 PRC1O43663 620 aa16.3■□□□□ 0.2
VTI1A-206ENST00000489142 CYTH3O43739 400 aa16.3■□□□□ 0.2
VTI1A-206ENST00000489142 CFBP00751 764 aa16.3■□□□□ 0.2
VTI1A-206ENST00000489142 RAG1P15918 1043 aa16.3■□□□□ 0.2
VTI1A-206ENST00000489142 EDNRBP24530 442 aa16.3■□□□□ 0.2
VTI1A-206ENST00000489142 NKX3-2P78367 333 aa16.3■□□□□ 0.2
VTI1A-206ENST00000489142 TROAPQ12815 778 aa16.3■□□□□ 0.2
VTI1A-206ENST00000489142 DUSP28Q4G0W2 176 aa16.3■□□□□ 0.2
VTI1A-206ENST00000489142 CATIPQ7Z7H3 387 aa16.3■□□□□ 0.2
VTI1A-206ENST00000489142 RAB11FIP4Q86YS3 637 aa16.3■□□□□ 0.2
VTI1A-206ENST00000489142 RGS22Q8NE09 1264 aa16.3■□□□□ 0.2
VTI1A-206ENST00000489142 DNERQ8NFT8 737 aa16.3■□□□□ 0.2
VTI1A-206ENST00000489142 OR6J1Q8NGC5 347 aa16.3■□□□□ 0.2
VTI1A-206ENST00000489142 PPP1R13LQ8WUF5 828 aa16.3■□□□□ 0.2
VTI1A-206ENST00000489142 MTMR8Q96EF0 704 aa16.3■□□□□ 0.2
VTI1A-206ENST00000489142 AMNQ9BXJ7 453 aa16.3■□□□□ 0.2
VTI1A-206ENST00000489142 LRRC2Q9BYS8 371 aa16.3■□□□□ 0.2
VTI1A-206ENST00000489142 ARVCFO00192 962 aa16.29■□□□□ 0.2
VTI1A-206ENST00000489142 KIAA0355O15063 1070 aa16.29■□□□□ 0.2
VTI1A-206ENST00000489142 ARIH2O95376 493 aa16.29■□□□□ 0.2
VTI1A-206ENST00000489142 EIF2AK2P19525 551 aaKnown RBP16.29■□□□□ 0.2
VTI1A-206ENST00000489142 RXRAP19793 462 aa16.29■□□□□ 0.2
VTI1A-206ENST00000489142 CDK7P50613 346 aa16.29■□□□□ 0.2
VTI1A-206ENST00000489142 NECTIN1Q15223 517 aa16.29■□□□□ 0.2
VTI1A-206ENST00000489142 SHHQ15465 462 aa16.29■□□□□ 0.2
VTI1A-206ENST00000489142 LRIT3Q3SXY7 679 aa16.29■□□□□ 0.2
VTI1A-206ENST00000489142 CASC1Q6TDU7 716 aa16.29■□□□□ 0.2
VTI1A-206ENST00000489142 Q7L0L9 218 aa16.29■□□□□ 0.2
VTI1A-206ENST00000489142 MCF2L2Q86YR7 1114 aa16.29■□□□□ 0.2
VTI1A-206ENST00000489142 ZNF654Q8IZM8 581 aa16.29■□□□□ 0.2
VTI1A-206ENST00000489142 RMDN3Q96TC7 470 aa16.29■□□□□ 0.2
VTI1A-206ENST00000489142 MPHOSPH6Q99547 160 aaKnown RBP16.29■□□□□ 0.2
VTI1A-206ENST00000489142 PCDHA1Q9Y5I3 950 aa16.29■□□□□ 0.2
VTI1A-206ENST00000489142 GRIN2DO15399 1336 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms