RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 EPB41L5Q9HCM4 733 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 EXOC1Q9NV70 894 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 TATP17735 454 aaPredicted RBP15.28■□□□□ 0.04
NPHP4-207ENST00000470763 XBP1P17861 261 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 MDH1P40925 334 aaKnown RBP15.28■□□□□ 0.04
NPHP4-207ENST00000470763 PHKA1P46020 1223 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 DNM2P50570 870 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 CABP4P57796 275 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 TRADDQ15628 312 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 MAATS1Q7Z4T9 603 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 IFNL2Q8IZJ0 200 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 ADSSL1Q8N142 457 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 PHF20Q9BVI0 1012 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 SH2D4AQ9H788 454 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 CNNM2Q9H8M5 875 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 HYOU1Q9Y4L1 999 aa15.28■□□□□ 0.04
NPHP4-207ENST00000470763 PATL2C9JE40 543 aaKnown RBP15.27■□□□□ 0.04
NPHP4-207ENST00000470763 SRGNP10124 158 aa15.27■□□□□ 0.04
NPHP4-207ENST00000470763 PAFAH1B1P43034 410 aa15.27■□□□□ 0.04
NPHP4-207ENST00000470763 ZBED6P86452 979 aa15.27■□□□□ 0.04
NPHP4-207ENST00000470763 IFIT5Q13325 482 aaKnown RBP15.27■□□□□ 0.04
NPHP4-207ENST00000470763 CCDC121Q6ZUS5 278 aa15.27■□□□□ 0.04
NPHP4-207ENST00000470763 MAGEB6Q8N7X4 407 aa15.27■□□□□ 0.04
NPHP4-207ENST00000470763 HAUS2Q9NVX0 235 aa15.27■□□□□ 0.04
NPHP4-207ENST00000470763 RMND1Q9NWS8 449 aa15.27■□□□□ 0.04
NPHP4-207ENST00000470763 KCNG1Q9UIX4 513 aa15.27■□□□□ 0.04
NPHP4-207ENST00000470763 TCRBV5S4A2TA0A5A2 114 aa15.27■□□□□ 0.03
NPHP4-207ENST00000470763 USO1O60763 962 aaKnown RBP15.27■□□□□ 0.03
NPHP4-207ENST00000470763 HEXIM1O94992 359 aaKnown RBP15.27■□□□□ 0.03
NPHP4-207ENST00000470763 PLEKHA8P1O95397 391 aa15.27■□□□□ 0.03
NPHP4-207ENST00000470763 ATP2C1P98194 919 aaPredicted RBP15.27■□□□□ 0.03
NPHP4-207ENST00000470763 SNCBQ16143 134 aa15.27■□□□□ 0.03
NPHP4-207ENST00000470763 KCTD19Q17RG1 926 aaPredicted RBP15.27■□□□□ 0.03
NPHP4-207ENST00000470763 MARCH10Q8NA82 808 aaPredicted RBP15.27■□□□□ 0.03
NPHP4-207ENST00000470763 PIK3R5Q8WYR1 880 aa15.27■□□□□ 0.03
NPHP4-207ENST00000470763 PCDHA13Q9Y5I0 950 aa15.27■□□□□ 0.03
NPHP4-207ENST00000470763 SLC4A4Q9Y6R1 1079 aa15.27■□□□□ 0.03
NPHP4-207ENST00000470763 MYH2Q9UKX2 1941 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 SMIM22K7EJ46 135 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 CYP27B1O15528 508 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 NEBLO76041 1014 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 FAM107AO95990 144 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 EEF1GP26641 437 aaKnown RBP15.26■□□□□ 0.03
NPHP4-207ENST00000470763 RNASE9P60153 205 aaKnown RBP15.26■□□□□ 0.03
NPHP4-207ENST00000470763 CYB5D1Q6P9G0 228 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 LDHAL6AQ6ZMR3 332 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 PIK3AP1Q6ZUJ8 805 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 FAM228AQ86W67 206 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 C2CD5Q86YS7 1000 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 DHX37Q8IY37 1157 aaKnown RBP15.26■□□□□ 0.03
NPHP4-207ENST00000470763 RASSF8Q8NHQ8 419 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 CYFIP2Q96F07 1278 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 TSGA10Q9BZW7 698 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 SALL4Q9UJQ4 1053 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 GOLGA6L7A0A1B0GV03 622 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 OPLAHO14841 1288 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 BUB1O43683 1085 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 STAT6P42226 847 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 PARP9Q8IXQ6 854 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 PAGR1Q9BTK6 254 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 TCP1P17987 556 aaKnown RBP15.26■□□□□ 0.03
NPHP4-207ENST00000470763 ITIH3Q06033 890 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 WLSQ5T9L3 541 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 ZNF572Q7Z3I7 529 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-207ENST00000470763 CSGALNACT2Q8N6G5 542 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 ATP6V1G3Q96LB4 118 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 CAMKK2Q96RR4 588 aa15.26■□□□□ 0.03
NPHP4-207ENST00000470763 TACO1Q9BSH4 297 aaKnown RBP15.26■□□□□ 0.03
NPHP4-207ENST00000470763 CDCA7Q9BWT1 371 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-207ENST00000470763 RNF26Q9BY78 433 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-207ENST00000470763 RIC1Q4ADV7 1423 aa15.25■□□□□ 0.03
NPHP4-207ENST00000470763 GSG1L2A8MUP6 293 aa15.25■□□□□ 0.03
NPHP4-207ENST00000470763 DNM1LO00429 736 aa15.25■□□□□ 0.03
NPHP4-207ENST00000470763 ARHGAP20Q9P2F6 1191 aa15.25■□□□□ 0.03
NPHP4-207ENST00000470763 NID2Q14112 1375 aa15.25■□□□□ 0.03
NPHP4-207ENST00000470763 ABCC12Q96J65 1359 aa15.25■□□□□ 0.03
NPHP4-207ENST00000470763 ADAMTS3O15072 1205 aa15.25■□□□□ 0.03
NPHP4-207ENST00000470763 BMP15O95972 392 aa15.25■□□□□ 0.03
NPHP4-207ENST00000470763 RPSAP08865 295 aaKnown RBP15.25■□□□□ 0.03
NPHP4-207ENST00000470763 GCFC2P16383 781 aaKnown RBP15.25■□□□□ 0.03
NPHP4-207ENST00000470763 MTIF2P46199 727 aaKnown RBP15.25■□□□□ 0.03
NPHP4-207ENST00000470763 SATB1Q01826 763 aa15.25■□□□□ 0.03
NPHP4-207ENST00000470763 PTF1AQ7RTS3 328 aa15.25■□□□□ 0.03
NPHP4-207ENST00000470763 IFT20Q8IY31 132 aa15.25■□□□□ 0.03
NPHP4-207ENST00000470763 FUKQ8N0W3 1084 aa15.25■□□□□ 0.03
NPHP4-207ENST00000470763 RUBCNQ92622 972 aa15.25■□□□□ 0.03
NPHP4-207ENST00000470763 FAXDC2Q96IV6 333 aa15.25■□□□□ 0.03
NPHP4-207ENST00000470763 ALS2CR12Q96Q35 445 aa15.25■□□□□ 0.03
NPHP4-207ENST00000470763 OSBPL7Q9BZF2 842 aa15.25■□□□□ 0.03
NPHP4-207ENST00000470763 SBF2Q86WG5 1849 aa15.25■□□□□ 0.03
NPHP4-207ENST00000470763 PP2D1A8MPX8 630 aa15.24■□□□□ 0.03
NPHP4-207ENST00000470763 KIF11P52732 1056 aa15.24■□□□□ 0.03
NPHP4-207ENST00000470763 CLNS1AP54105 237 aaKnown RBP15.24■□□□□ 0.03
NPHP4-207ENST00000470763 ITGB3BPQ13352 177 aaPredicted RBP15.24■□□□□ 0.03
NPHP4-207ENST00000470763 QPCTQ16769 361 aa15.24■□□□□ 0.03
NPHP4-207ENST00000470763 C6orf89Q6UWU4 347 aa15.24■□□□□ 0.03
NPHP4-207ENST00000470763 THAP9Q9H5L6 903 aa15.24■□□□□ 0.03
NPHP4-207ENST00000470763 CNNM1Q9NRU3 951 aa15.24■□□□□ 0.03
NPHP4-207ENST00000470763 TPX2Q9ULW0 747 aaKnown RBP15.24■□□□□ 0.03
NPHP4-207ENST00000470763 PLAAQ9Y263 795 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms