RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, human

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT4-208	ENST00000465721	SNAP25	P60880	206 aa		13.98	□□□□□ -0.17
CNOT4-208	ENST00000465721	TFAP4	Q01664	338 aa		13.98	□□□□□ -0.17
CNOT4-208	ENST00000465721	TFF2	Q03403	129 aa		13.98	□□□□□ -0.17
CNOT4-208	ENST00000465721	PDE4B	Q07343	736 aa		13.98	□□□□□ -0.17
CNOT4-208	ENST00000465721	PPARA	Q07869	468 aa		13.98	□□□□□ -0.17
CNOT4-208	ENST00000465721	IK	Q13123	557 aa	Predicted RBP	13.98	□□□□□ -0.17
CNOT4-208	ENST00000465721	TTLL4	Q14679	1199 aa		13.98	□□□□□ -0.17
CNOT4-208	ENST00000465721	IQSEC1	Q6DN90	963 aa		13.98	□□□□□ -0.17
CNOT4-208	ENST00000465721	KCTD1	Q719H9	257 aa		13.98	□□□□□ -0.17
CNOT4-208	ENST00000465721	IL27	Q8NEV9	243 aa		13.98	□□□□□ -0.17
CNOT4-208	ENST00000465721	CHMP4C	Q96CF2	233 aa		13.98	□□□□□ -0.17
CNOT4-208	ENST00000465721	PURB	Q96QR8	312 aa	Known RBP	13.98	□□□□□ -0.17
CNOT4-208	ENST00000465721	SEC62	Q99442	399 aa	Known RBP	13.98	□□□□□ -0.17
CNOT4-208	ENST00000465721	CHMP4B	Q9H444	224 aa	Known RBP	13.98	□□□□□ -0.17
CNOT4-208	ENST00000465721	TRMT13	Q9NUP7	481 aa	Known RBP	13.98	□□□□□ -0.17
CNOT4-208	ENST00000465721	PRR12	Q9ULL5	1215 aa		13.98	□□□□□ -0.17
CNOT4-208	ENST00000465721	LAMA4	Q16363	1823 aa		13.97	□□□□□ -0.17
CNOT4-208	ENST00000465721	ZBBX	A8MT70	800 aa		13.97	□□□□□ -0.17
CNOT4-208	ENST00000465721	FOXP2	O15409	715 aa		13.97	□□□□□ -0.17
CNOT4-208	ENST00000465721	PFKM	P08237	780 aa		13.97	□□□□□ -0.17
CNOT4-208	ENST00000465721	CYP2C9	P11712	490 aa		13.97	□□□□□ -0.17
CNOT4-208	ENST00000465721	PLA2G5	P39877	138 aa		13.97	□□□□□ -0.17
CNOT4-208	ENST00000465721	DUSP28	Q4G0W2	176 aa		13.97	□□□□□ -0.17
CNOT4-208	ENST00000465721	RPUSD2	Q8IZ73	545 aa	Known RBP	13.97	□□□□□ -0.17
CNOT4-208	ENST00000465721	MICALL1	Q8N3F8	863 aa		13.97	□□□□□ -0.17
CNOT4-208	ENST00000465721	GPATCH3	Q96I76	525 aa		13.97	□□□□□ -0.17
CNOT4-208	ENST00000465721	TNKS	O95271	1327 aa		13.96	□□□□□ -0.17
CNOT4-208	ENST00000465721	EPOP	A6NHQ4	379 aa		13.96	□□□□□ -0.17
CNOT4-208	ENST00000465721	CA3	P07451	260 aa		13.96	□□□□□ -0.17
CNOT4-208	ENST00000465721	KCNQ1	P51787	676 aa		13.96	□□□□□ -0.17
CNOT4-208	ENST00000465721	PURA	Q00577	322 aa	Known RBP	13.96	□□□□□ -0.17
CNOT4-208	ENST00000465721	C20orf194	Q5TEA3	1177 aa		13.96	□□□□□ -0.17
CNOT4-208	ENST00000465721	RCSD1	Q6JBY9	416 aa		13.96	□□□□□ -0.17
CNOT4-208	ENST00000465721	NSMF	Q6X4W1	530 aa		13.96	□□□□□ -0.17
CNOT4-208	ENST00000465721	NACAP1	Q9BZK3	213 aa		13.96	□□□□□ -0.17
CNOT4-208	ENST00000465721	NAPB	Q9H115	298 aa		13.96	□□□□□ -0.17
CNOT4-208	ENST00000465721	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.96	□□□□□ -0.17
CNOT4-208	ENST00000465721	IL17RB	Q9NRM6	502 aa		13.96	□□□□□ -0.17
CNOT4-208	ENST00000465721	CCPG1	Q9ULG6	757 aa		13.96	□□□□□ -0.17
CNOT4-208	ENST00000465721	STX8	Q9UNK0	236 aa		13.96	□□□□□ -0.17
CNOT4-208	ENST00000465721	MICAL3	Q7RTP6	2002 aa		13.96	□□□□□ -0.17
CNOT4-208	ENST00000465721	ERC2	O15083	957 aa		13.95	□□□□□ -0.18
CNOT4-208	ENST00000465721	NMT2	O60551	498 aa		13.95	□□□□□ -0.18
CNOT4-208	ENST00000465721	ARHGEF15	O94989	841 aa		13.95	□□□□□ -0.18
CNOT4-208	ENST00000465721	ICAM1	P05362	532 aa		13.95	□□□□□ -0.18
CNOT4-208	ENST00000465721	POU3F3	P20264	500 aa	Predicted RBP	13.95	□□□□□ -0.18
CNOT4-208	ENST00000465721	NOV	P48745	357 aa		13.95	□□□□□ -0.18
CNOT4-208	ENST00000465721	ALDH5A1	P51649	535 aa	Predicted RBP	13.95	□□□□□ -0.18
CNOT4-208	ENST00000465721	ZMYM1	Q5SVZ6	1142 aa		13.95	□□□□□ -0.18
CNOT4-208	ENST00000465721	KIAA1211	Q6ZU35	1233 aa		13.95	□□□□□ -0.18
CNOT4-208	ENST00000465721	RANBP17	Q9H2T7	1088 aa	Known RBP	13.95	□□□□□ -0.18
CNOT4-208	ENST00000465721	DCTPP1	Q9H773	170 aa		13.95	□□□□□ -0.18
CNOT4-208	ENST00000465721	POLR3E	Q9NVU0	708 aa		13.95	□□□□□ -0.18
CNOT4-208	ENST00000465721	MTCH2	Q9Y6C9	303 aa		13.95	□□□□□ -0.18
CNOT4-208	ENST00000465721	RBM47	A0AV96	593 aa	Known RBP	13.94	□□□□□ -0.18
CNOT4-208	ENST00000465721	RFXAP	O00287	272 aa		13.94	□□□□□ -0.18
CNOT4-208	ENST00000465721	NFIB	O00712	420 aa		13.94	□□□□□ -0.18
CNOT4-208	ENST00000465721	SLC3A2	P08195	630 aa	Known RBP	13.94	□□□□□ -0.18
CNOT4-208	ENST00000465721	TMEM67	Q5HYA8	995 aa		13.94	□□□□□ -0.18
CNOT4-208	ENST00000465721	PPP4R3B	Q5MIZ7	849 aa		13.94	□□□□□ -0.18
CNOT4-208	ENST00000465721	SLC30A10	Q6XR72	485 aa		13.94	□□□□□ -0.18
CNOT4-208	ENST00000465721	DEFB128	Q7Z7B8	93 aa		13.94	□□□□□ -0.18
CNOT4-208	ENST00000465721	MIER1	Q8N108	512 aa		13.94	□□□□□ -0.18
CNOT4-208	ENST00000465721	PI4K2B	Q8TCG2	481 aa		13.94	□□□□□ -0.18
CNOT4-208	ENST00000465721	WDR11	Q9BZH6	1224 aa		13.94	□□□□□ -0.18
CNOT4-208	ENST00000465721	ATG2A	Q2TAZ0	1938 aa		13.94	□□□□□ -0.18
CNOT4-208	ENST00000465721	LOC102724159	A0A0B4J2E5	919 aa		13.93	□□□□□ -0.18
CNOT4-208	ENST00000465721	TSPY2	A6NKD2	308 aa		13.93	□□□□□ -0.18
CNOT4-208	ENST00000465721	SUPT20HL2	P0C7V6	817 aa		13.93	□□□□□ -0.18
CNOT4-208	ENST00000465721	CPT1A	P50416	773 aa		13.93	□□□□□ -0.18
CNOT4-208	ENST00000465721	CTDSPL2	Q05D32	466 aa		13.93	□□□□□ -0.18
CNOT4-208	ENST00000465721	BAAT	Q14032	418 aa	Predicted RBP	13.93	□□□□□ -0.18
CNOT4-208	ENST00000465721	PWP2	Q15269	919 aa	Known RBP	13.93	□□□□□ -0.18
CNOT4-208	ENST00000465721	AAK1	Q2M2I8	961 aa		13.93	□□□□□ -0.18
CNOT4-208	ENST00000465721	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.93	□□□□□ -0.18
CNOT4-208	ENST00000465721	KRT40	Q6A162	431 aa		13.93	□□□□□ -0.18
CNOT4-208	ENST00000465721	DCAF4	Q8WV16	495 aa		13.93	□□□□□ -0.18
CNOT4-208	ENST00000465721	SLC9A7	Q96T83	725 aa		13.93	□□□□□ -0.18
CNOT4-208	ENST00000465721	MTG1	Q9BT17	334 aa	Predicted RBP	13.93	□□□□□ -0.18
CNOT4-208	ENST00000465721	CERS4	Q9HA82	394 aa		13.93	□□□□□ -0.18
CNOT4-208	ENST00000465721	INCENP	Q9NQS7	918 aa		13.93	□□□□□ -0.18
CNOT4-208	ENST00000465721	ADD3	Q9UEY8	706 aa	Known RBP	13.93	□□□□□ -0.18
CNOT4-208	ENST00000465721	NLRC5	Q86WI3	1866 aa		13.93	□□□□□ -0.18
CNOT4-208	ENST00000465721	TTC41P	Q6P2S7	1318 aa		13.92	□□□□□ -0.18
CNOT4-208	ENST00000465721	PITPNM1	O00562	1244 aa		13.92	□□□□□ -0.18
CNOT4-208	ENST00000465721	MYL3	P08590	195 aa		13.92	□□□□□ -0.18
CNOT4-208	ENST00000465721	RFC2	P35250	354 aa		13.92	□□□□□ -0.18
CNOT4-208	ENST00000465721	TAP1	Q03518	808 aa		13.92	□□□□□ -0.18
CNOT4-208	ENST00000465721	CCDC96	Q2M329	555 aa		13.92	□□□□□ -0.18
CNOT4-208	ENST00000465721	TTBK2	Q6IQ55	1244 aa		13.92	□□□□□ -0.18
CNOT4-208	ENST00000465721	BTNL9	Q6UXG8	535 aa		13.92	□□□□□ -0.18
CNOT4-208	ENST00000465721	SPRED2	Q7Z698	418 aa		13.92	□□□□□ -0.18
CNOT4-208	ENST00000465721	OR6J1	Q8NGC5	347 aa		13.92	□□□□□ -0.18
CNOT4-208	ENST00000465721	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.92	□□□□□ -0.18
CNOT4-208	ENST00000465721	PPP1R13L	Q8WUF5	828 aa		13.92	□□□□□ -0.18
CNOT4-208	ENST00000465721	FSD1	Q9BTV5	496 aa		13.92	□□□□□ -0.18
CNOT4-208	ENST00000465721	C1QTNF1	Q9BXJ1	281 aa		13.92	□□□□□ -0.18
CNOT4-208	ENST00000465721	RCAN3	Q9UKA8	241 aa		13.92	□□□□□ -0.18
CNOT4-208	ENST00000465721	MTMR7	Q9Y216	660 aa		13.92	□□□□□ -0.18
CNOT4-208	ENST00000465721	TRIO	O75962	3097 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms