RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 SH3RF1Q7Z6J0 888 aa22.07■■□□□ 1.12
COL5A1-203ENST00000460264 TLK2Q86UE8 772 aa22.07■■□□□ 1.12
COL5A1-203ENST00000460264 SENP2Q9HC62 589 aa22.07■■□□□ 1.12
COL5A1-203ENST00000460264 MAD2L2Q9UI95 211 aa22.07■■□□□ 1.12
COL5A1-203ENST00000460264 ERICH2A1L162 156 aa22.06■■□□□ 1.12
COL5A1-203ENST00000460264 KLRF2D3W0D1 207 aa22.06■■□□□ 1.12
COL5A1-203ENST00000460264 PQBP1O60828 265 aaKnown RBP22.06■■□□□ 1.12
COL5A1-203ENST00000460264 ASGR1P07306 291 aa22.06■■□□□ 1.12
COL5A1-203ENST00000460264 PTGS1P23219 599 aa22.06■■□□□ 1.12
COL5A1-203ENST00000460264 ANTXR2P58335 489 aa22.06■■□□□ 1.12
COL5A1-203ENST00000460264 SART3Q15020 963 aaKnown RBP22.06■■□□□ 1.12
COL5A1-203ENST00000460264 IQSEC1Q6DN90 963 aa22.06■■□□□ 1.12
COL5A1-203ENST00000460264 MB21D2Q8IYB1 491 aaPredicted RBP22.06■■□□□ 1.12
COL5A1-203ENST00000460264 RGS22Q8NE09 1264 aa22.06■■□□□ 1.12
COL5A1-203ENST00000460264 GLT1D1Q96MS3 346 aa22.06■■□□□ 1.12
COL5A1-203ENST00000460264 VAT1LQ9HCJ6 419 aa22.06■■□□□ 1.12
COL5A1-203ENST00000460264 ELP1O95163 1332 aa22.06■■□□□ 1.12
COL5A1-203ENST00000460264 TRIM43BA6NCK2 446 aa22.05■■□□□ 1.12
COL5A1-203ENST00000460264 PALM3A6NDB9 673 aaPredicted RBP22.05■■□□□ 1.12
COL5A1-203ENST00000460264 CLTBP09497 229 aa22.05■■□□□ 1.12
COL5A1-203ENST00000460264 EDNRBP24530 442 aa22.05■■□□□ 1.12
COL5A1-203ENST00000460264 BEX3Q00994 111 aa22.05■■□□□ 1.12
COL5A1-203ENST00000460264 GRM4Q14833 912 aa22.05■■□□□ 1.12
COL5A1-203ENST00000460264 WTAPQ15007 396 aa22.05■■□□□ 1.12
COL5A1-203ENST00000460264 TMEM63BQ5T3F8 832 aa22.05■■□□□ 1.12
COL5A1-203ENST00000460264 CHST3Q7LGC8 479 aa22.05■■□□□ 1.12
COL5A1-203ENST00000460264 ANKRD33Q7Z3H0 272 aa22.05■■□□□ 1.12
COL5A1-203ENST00000460264 FBXO11Q86XK2 927 aa22.05■■□□□ 1.12
COL5A1-203ENST00000460264 DNERQ8NFT8 737 aa22.05■■□□□ 1.12
COL5A1-203ENST00000460264 TRIM43Q96BQ3 446 aaPredicted RBP22.05■■□□□ 1.12
COL5A1-203ENST00000460264 MAF1Q9H063 256 aa22.05■■□□□ 1.12
COL5A1-203ENST00000460264 BAZ2BQ9UIF8 2168 aaKnown RBP22.05■■□□□ 1.12
COL5A1-203ENST00000460264 FSCN1Q16658 493 aaKnown RBP22.04■■□□□ 1.12
COL5A1-203ENST00000460264 TMEM67Q5HYA8 995 aa22.04■■□□□ 1.12
COL5A1-203ENST00000460264 MTMR8Q96EF0 704 aa22.04■■□□□ 1.12
COL5A1-203ENST00000460264 LRCH3Q96II8 777 aa22.04■■□□□ 1.12
COL5A1-203ENST00000460264 TOX2Q96NM4 488 aa22.04■■□□□ 1.12
COL5A1-203ENST00000460264 AP5M1Q9H0R1 490 aa22.04■■□□□ 1.12
COL5A1-203ENST00000460264 KIAA1217Q5T5P2 1943 aa22.04■■□□□ 1.12
COL5A1-203ENST00000460264 PDE4DQ08499 809 aa22.03■■□□□ 1.12
COL5A1-203ENST00000460264 TROAPQ12815 778 aa22.03■■□□□ 1.12
COL5A1-203ENST00000460264 SLC35G1Q2M3R5 365 aa22.03■■□□□ 1.12
COL5A1-203ENST00000460264 LRIT3Q3SXY7 679 aa22.03■■□□□ 1.12
COL5A1-203ENST00000460264 IGDCC4Q8TDY8 1250 aa22.03■■□□□ 1.12
COL5A1-203ENST00000460264 TBC1D5Q92609 795 aa22.03■■□□□ 1.12
COL5A1-203ENST00000460264 MPHOSPH6Q99547 160 aaKnown RBP22.03■■□□□ 1.12
COL5A1-203ENST00000460264 MRPL11Q9Y3B7 192 aaKnown RBP22.03■■□□□ 1.12
COL5A1-203ENST00000460264 Q9Y3F1 56 aa22.03■■□□□ 1.12
COL5A1-203ENST00000460264 RBM47A0AV96 593 aaKnown RBP22.02■■□□□ 1.12
COL5A1-203ENST00000460264 KIAA0355O15063 1070 aa22.02■■□□□ 1.12
COL5A1-203ENST00000460264 DYNC1LI2O43237 492 aaPredicted RBP22.02■■□□□ 1.12
COL5A1-203ENST00000460264 PPP1R11O60927 126 aaPredicted RBP22.02■■□□□ 1.12
COL5A1-203ENST00000460264 DUSP28Q4G0W2 176 aa22.02■■□□□ 1.12
COL5A1-203ENST00000460264 BADQ92934 168 aa22.02■■□□□ 1.12
COL5A1-203ENST00000460264 AMNQ9BXJ7 453 aa22.02■■□□□ 1.12
COL5A1-203ENST00000460264 WDR11Q9BZH6 1224 aa22.02■■□□□ 1.12
COL5A1-203ENST00000460264 ANO2Q9NQ90 1003 aa22.02■■□□□ 1.12
COL5A1-203ENST00000460264 COL20A1Q9P218 1284 aa22.02■■□□□ 1.12
COL5A1-203ENST00000460264 A0A0U1RQG5 324 aaPredicted RBP22.01■■□□□ 1.11
COL5A1-203ENST00000460264 DCDC2CA8MYV0 355 aa22.01■■□□□ 1.11
COL5A1-203ENST00000460264 B4DLN1 442 aa22.01■■□□□ 1.11
COL5A1-203ENST00000460264 SLC27A2O14975 620 aa22.01■■□□□ 1.11
COL5A1-203ENST00000460264 ZBTB5O15062 677 aa22.01■■□□□ 1.11
COL5A1-203ENST00000460264 CDK7P50613 346 aa22.01■■□□□ 1.11
COL5A1-203ENST00000460264 MRPL12P52815 198 aaKnown RBP22.01■■□□□ 1.11
COL5A1-203ENST00000460264 FAAP100Q0VG06 881 aa22.01■■□□□ 1.11
COL5A1-203ENST00000460264 MCF2L2Q86YR7 1114 aa22.01■■□□□ 1.11
COL5A1-203ENST00000460264 SYTL5Q8TDW5 730 aaPredicted RBP22.01■■□□□ 1.11
COL5A1-203ENST00000460264 VTI1AQ96AJ9 217 aa22.01■■□□□ 1.11
COL5A1-203ENST00000460264 LY9Q9HBG7 655 aa22.01■■□□□ 1.11
COL5A1-203ENST00000460264 MROH7Q68CQ1 1323 aa22.01■■□□□ 1.11
COL5A1-203ENST00000460264 OPLAHO14841 1288 aa22■■□□□ 1.11
COL5A1-203ENST00000460264 ITGB8P26012 769 aa22■■□□□ 1.11
COL5A1-203ENST00000460264 NECTIN1Q15223 517 aa22■■□□□ 1.11
COL5A1-203ENST00000460264 CREB3L3Q68CJ9 461 aa22■■□□□ 1.11
COL5A1-203ENST00000460264 CXCL17Q6UXB2 119 aa22■■□□□ 1.11
COL5A1-203ENST00000460264 CATIPQ7Z7H3 387 aa22■■□□□ 1.11
COL5A1-203ENST00000460264 RIOX1Q9H6W3 641 aa22■■□□□ 1.11
COL5A1-203ENST00000460264 TMEM39AQ9NV64 488 aa22■■□□□ 1.11
COL5A1-203ENST00000460264 ARVCFO00192 962 aa21.99■■□□□ 1.11
COL5A1-203ENST00000460264 PRC1O43663 620 aa21.99■■□□□ 1.11
COL5A1-203ENST00000460264 CYTH3O43739 400 aa21.99■■□□□ 1.11
COL5A1-203ENST00000460264 ZEB2O60315 1214 aa21.99■■□□□ 1.11
COL5A1-203ENST00000460264 CABYRO75952 493 aa21.99■■□□□ 1.11
COL5A1-203ENST00000460264 COL9A3Q14050 684 aaPredicted RBP21.99■■□□□ 1.11
COL5A1-203ENST00000460264 HOMER1Q86YM7 354 aa21.99■■□□□ 1.11
COL5A1-203ENST00000460264 SCFD2Q8WU76 684 aa21.99■■□□□ 1.11
COL5A1-203ENST00000460264 CCDC136Q96JN2 1154 aa21.99■■□□□ 1.11
COL5A1-203ENST00000460264 TAAR1Q96RJ0 339 aa21.99■■□□□ 1.11
COL5A1-203ENST00000460264 MTA3Q9BTC8 594 aa21.99■■□□□ 1.11
COL5A1-203ENST00000460264 GPHNQ9NQX3 736 aaPredicted RBP21.99■■□□□ 1.11
COL5A1-203ENST00000460264 TBX21Q9UL17 535 aa21.99■■□□□ 1.11
COL5A1-203ENST00000460264 RAG1P15918 1043 aa21.98■■□□□ 1.11
COL5A1-203ENST00000460264 MCM5P33992 734 aa21.98■■□□□ 1.11
COL5A1-203ENST00000460264 GHRHRQ02643 423 aa21.98■■□□□ 1.11
COL5A1-203ENST00000460264 PPP2R5BQ15173 497 aa21.98■■□□□ 1.11
COL5A1-203ENST00000460264 CASC1Q6TDU7 716 aa21.98■■□□□ 1.11
COL5A1-203ENST00000460264 NSUN6Q8TEA1 469 aaKnown RBP21.98■■□□□ 1.11
COL5A1-203ENST00000460264 PIGSQ96S52 555 aa21.98■■□□□ 1.11
COL5A1-203ENST00000460264 RMDN3Q96TC7 470 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms