RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 PPFIBP1Q86W92 1011 aa10.66□□□□□ -0.7
CUX1-206ENST00000437600 TBCKQ8TEA7 893 aa10.66□□□□□ -0.7
CUX1-206ENST00000437600 BARHL2Q9NY43 387 aa10.66□□□□□ -0.7
CUX1-206ENST00000437600 AKR1B15C9JRZ8 316 aaPredicted RBP10.66□□□□□ -0.7
CUX1-206ENST00000437600 HLA-DOAP06340 250 aa10.66□□□□□ -0.7
CUX1-206ENST00000437600 CCDC96Q2M329 555 aa10.66□□□□□ -0.7
CUX1-206ENST00000437600 ARHGAP29Q52LW3 1261 aa10.66□□□□□ -0.7
CUX1-206ENST00000437600 TMED8Q6PL24 325 aaPredicted RBP10.66□□□□□ -0.7
CUX1-206ENST00000437600 HHIPL2Q6UWX4 724 aa10.66□□□□□ -0.7
CUX1-206ENST00000437600 DYMQ7RTS9 669 aa10.66□□□□□ -0.7
CUX1-206ENST00000437600 NUP88Q99567 741 aaPredicted RBP10.66□□□□□ -0.7
CUX1-206ENST00000437600 POLD4Q9HCU8 107 aa10.66□□□□□ -0.7
CUX1-206ENST00000437600 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.66□□□□□ -0.78e-7■■□□□ 12.7
CUX1-206ENST00000437600 ZNF541Q9H0D2 1346 aa10.65□□□□□ -0.7
CUX1-206ENST00000437600 ARFGEF1Q9Y6D6 1849 aa10.65□□□□□ -0.7
CUX1-206ENST00000437600 ARHGAP6O43182 974 aa10.65□□□□□ -0.7
CUX1-206ENST00000437600 GYPCP04921 128 aa10.65□□□□□ -0.7
CUX1-206ENST00000437600 KLK7P49862 253 aa10.65□□□□□ -0.7
CUX1-206ENST00000437600 UBE2SQ16763 222 aa10.65□□□□□ -0.7
CUX1-206ENST00000437600 RSBN1LQ6PCB5 846 aaPredicted RBP10.65□□□□□ -0.7
CUX1-206ENST00000437600 TRIML1Q8N9V2 468 aa10.65□□□□□ -0.7
CUX1-206ENST00000437600 ZDHHC15Q96MV8 337 aa10.65□□□□□ -0.7
CUX1-206ENST00000437600 CHP1Q99653 195 aa10.65□□□□□ -0.7
CUX1-206ENST00000437600 SRRTQ9BXP5 876 aaKnown RBP10.65□□□□□ -0.7
CUX1-206ENST00000437600 DISC1Q9NRI5 854 aa10.65□□□□□ -0.7
CUX1-206ENST00000437600 TCP11L1Q9NUJ3 509 aa10.65□□□□□ -0.7
CUX1-206ENST00000437600 ASTN2O75129 1339 aaPredicted RBP10.65□□□□□ -0.7
CUX1-206ENST00000437600 SBF1O95248 1867 aa10.65□□□□□ -0.7
CUX1-206ENST00000437600 PLCG1P19174 1290 aa10.65□□□□□ -0.71
CUX1-206ENST00000437600 CALML3P27482 149 aa10.65□□□□□ -0.71
CUX1-206ENST00000437600 UBXN1Q04323 297 aa10.65□□□□□ -0.71
CUX1-206ENST00000437600 CCDC178Q5BJE1 867 aa10.65□□□□□ -0.71
CUX1-206ENST00000437600 SAMD7Q7Z3H4 446 aa10.65□□□□□ -0.71
CUX1-206ENST00000437600 POTEDQ86YR6 584 aa10.65□□□□□ -0.71
CUX1-206ENST00000437600 CERS3Q8IU89 383 aa10.65□□□□□ -0.71
CUX1-206ENST00000437600 RGS22Q8NE09 1264 aa10.65□□□□□ -0.71
CUX1-206ENST00000437600 ANKS1AQ92625 1134 aa10.65□□□□□ -0.71
CUX1-206ENST00000437600 NUDT12Q9BQG2 462 aa10.65□□□□□ -0.71
CUX1-206ENST00000437600 M0R2N6 131 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 RAD51AP2Q09MP3 1159 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 STK4Q13043 487 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 PAK1Q13153 545 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 SEPT2Q15019 361 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 NBPF9Q3BBW0 867 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 SOGA3Q5TF21 947 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 IRF2BP1Q8IU81 584 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 CCDC34Q96HJ3 373 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 TRIM34Q9BYJ4 488 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 VEZTQ9HBM0 779 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 TRIM10Q9UDY6 481 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 SUGT1Q9Y2Z0 365 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 PSME4Q14997 1843 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 POTEMA6NI47 508 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 KCNJ18B7U540 433 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 SEC31AO94979 1220 aaKnown RBP10.64□□□□□ -0.71
CUX1-206ENST00000437600 TDP2O95551 362 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 JAG1P78504 1218 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 KCNJ12Q14500 433 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 CDKAL1Q5VV42 579 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 SPICE1Q8N0Z3 855 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 CCDC12Q8WUD4 166 aaPredicted RBP10.64□□□□□ -0.71
CUX1-206ENST00000437600 HINFPQ9BQA5 517 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 SLF1Q9BQI6 1058 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 SLC39A2Q9NP94 309 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 ZNF446Q9NWS9 450 aa10.64□□□□□ -0.71
CUX1-206ENST00000437600 SEC63Q9UGP8 760 aaKnown RBP10.64□□□□□ -0.71
CUX1-206ENST00000437600 PUF60Q9UHX1 559 aaKnown RBP10.64□□□□□ -0.71
CUX1-206ENST00000437600 ZBTB22O15209 634 aa10.63□□□□□ -0.71
CUX1-206ENST00000437600 STX10O60499 249 aa10.63□□□□□ -0.71
CUX1-206ENST00000437600 TTLL1O95922 423 aa10.63□□□□□ -0.71
CUX1-206ENST00000437600 VIL1P09327 827 aaKnown RBP10.63□□□□□ -0.71
CUX1-206ENST00000437600 CASQ1P31415 396 aa10.63□□□□□ -0.71
CUX1-206ENST00000437600 GNAQP50148 359 aa10.63□□□□□ -0.71
CUX1-206ENST00000437600 CIAPIN1Q6FI81 312 aa10.63□□□□□ -0.71
CUX1-206ENST00000437600 GLIS3Q8NEA6 775 aa10.63□□□□□ -0.71
CUX1-206ENST00000437600 ERO1AQ96HE7 468 aa10.63□□□□□ -0.71
CUX1-206ENST00000437600 CGNQ9P2M7 1197 aaKnown RBP10.63□□□□□ -0.71
CUX1-206ENST00000437600 POLR2AP24928 1970 aaKnown RBP10.63□□□□□ -0.71
CUX1-206ENST00000437600 GTPBP6O43824 516 aaPredicted RBP10.63□□□□□ -0.71
CUX1-206ENST00000437600 TXLNAP40222 546 aa10.63□□□□□ -0.71
CUX1-206ENST00000437600 CERKLQ49MI3 558 aaPredicted RBP10.63□□□□□ -0.71
CUX1-206ENST00000437600 TBC1D10BQ4KMP7 808 aaPredicted RBP10.63□□□□□ -0.71
CUX1-206ENST00000437600 FILIP1LQ4L180 1135 aa10.63□□□□□ -0.71
CUX1-206ENST00000437600 ZNF771Q7L3S4 317 aaPredicted RBP10.63□□□□□ -0.71
CUX1-206ENST00000437600 MIGA2Q7L4E1 593 aa10.63□□□□□ -0.71
CUX1-206ENST00000437600 CCDC84Q86UT8 332 aaPredicted RBP10.63□□□□□ -0.71
CUX1-206ENST00000437600 MNS1Q8NEH6 495 aa10.63□□□□□ -0.71
CUX1-206ENST00000437600 RRP36Q96EU6 259 aaKnown RBP10.63□□□□□ -0.71
CUX1-206ENST00000437600 CSRNP1Q96S65 589 aa10.63□□□□□ -0.71
CUX1-206ENST00000437600 ZSCAN12O43309 604 aa10.63□□□□□ -0.71
CUX1-206ENST00000437600 SLC37A4O43826 429 aa10.63□□□□□ -0.71
CUX1-206ENST00000437600 BMP15O95972 392 aa10.63□□□□□ -0.71
CUX1-206ENST00000437600 EEF2P13639 858 aaKnown RBP10.63□□□□□ -0.71
CUX1-206ENST00000437600 KRT9P35527 623 aa10.63□□□□□ -0.71
CUX1-206ENST00000437600 TNNI2P48788 182 aa10.63□□□□□ -0.71
CUX1-206ENST00000437600 COPB1P53618 953 aaKnown RBP10.63□□□□□ -0.71
CUX1-206ENST00000437600 RRP1BQ14684 758 aaKnown RBP10.63□□□□□ -0.71
CUX1-206ENST00000437600 LRRC41Q15345 812 aa10.63□□□□□ -0.71
CUX1-206ENST00000437600 GPR162Q16538 588 aa10.63□□□□□ -0.71
CUX1-206ENST00000437600 TCP11X2Q5H9J9 407 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms