RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 GGA1Q9UJY5 639 aa13.17□□□□□ -0.3
ITSN1-211ENST00000399355 ZSCAN12O43309 604 aa13.17□□□□□ -0.3
ITSN1-211ENST00000399355 HERVK_113P62684 666 aa13.17□□□□□ -0.3
ITSN1-211ENST00000399355 ZNF658Q5TYW1 1059 aaPredicted RBP13.17□□□□□ -0.3
ITSN1-211ENST00000399355 GTPBP6O43824 516 aaPredicted RBP13.16□□□□□ -0.3
ITSN1-211ENST00000399355 ERCC5P28715 1186 aaPredicted RBP13.16□□□□□ -0.3
ITSN1-211ENST00000399355 CHRNA5P30532 468 aa13.16□□□□□ -0.3
ITSN1-211ENST00000399355 TERF2Q15554 542 aa13.16□□□□□ -0.3
ITSN1-211ENST00000399355 TMCO3Q6UWJ1 677 aa13.16□□□□□ -0.3
ITSN1-211ENST00000399355 ADSSL1Q8N142 457 aa13.16□□□□□ -0.3
ITSN1-211ENST00000399355 HDAC7Q8WUI4 952 aa13.16□□□□□ -0.3
ITSN1-211ENST00000399355 TUBGCP2Q9BSJ2 902 aa13.16□□□□□ -0.3
ITSN1-211ENST00000399355 TRIM9Q9C026 710 aa13.16□□□□□ -0.3
ITSN1-211ENST00000399355 ANKRD2Q9GZV1 360 aa13.16□□□□□ -0.3
ITSN1-211ENST00000399355 BTAF1O14981 1849 aa13.16□□□□□ -0.3
ITSN1-211ENST00000399355 MYBL2P10244 700 aa13.16□□□□□ -0.3
ITSN1-211ENST00000399355 MTIF2P46199 727 aaKnown RBP13.16□□□□□ -0.3
ITSN1-211ENST00000399355 CNOT6LQ96LI5 555 aaKnown RBP13.16□□□□□ -0.3
ITSN1-211ENST00000399355 SALL4Q9UJQ4 1053 aa13.16□□□□□ -0.3
ITSN1-211ENST00000399355 NID2Q14112 1375 aa13.16□□□□□ -0.3
ITSN1-211ENST00000399355 CNTNAP4Q9C0A0 1308 aa13.16□□□□□ -0.3
ITSN1-211ENST00000399355 PDE2AO00408 941 aaPredicted RBP13.16□□□□□ -0.3
ITSN1-211ENST00000399355 CHMP4BP1P59074 171 aa13.16□□□□□ -0.3
ITSN1-211ENST00000399355 SLC7A5Q01650 507 aa13.16□□□□□ -0.3
ITSN1-211ENST00000399355 CC2D1AQ6P1N0 951 aaPredicted RBP13.16□□□□□ -0.3
ITSN1-211ENST00000399355 ZNF804AQ7Z570 1209 aa13.16□□□□□ -0.3
ITSN1-211ENST00000399355 TBC1D5Q92609 795 aa13.16□□□□□ -0.3
ITSN1-211ENST00000399355 MMS19Q96T76 1030 aa13.16□□□□□ -0.3
ITSN1-211ENST00000399355 TRIM34Q9BYJ4 488 aa13.16□□□□□ -0.3
ITSN1-211ENST00000399355 MMRN2Q9H8L6 949 aa13.16□□□□□ -0.3
ITSN1-211ENST00000399355 PHLPP2Q6ZVD8 1323 aa13.15□□□□□ -0.3
ITSN1-211ENST00000399355 DDTLA6NHG4 134 aaPredicted RBP13.15□□□□□ -0.3
ITSN1-211ENST00000399355 BUB1O43683 1085 aa13.15□□□□□ -0.3
ITSN1-211ENST00000399355 BAG3O95817 575 aa13.15□□□□□ -0.3
ITSN1-211ENST00000399355 CALM1P0DP23 149 aa13.15□□□□□ -0.3
ITSN1-211ENST00000399355 CALM2P0DP24 149 aa13.15□□□□□ -0.3
ITSN1-211ENST00000399355 CALM3P0DP25 149 aa13.15□□□□□ -0.3
ITSN1-211ENST00000399355 OAS2P29728 719 aaKnown RBP13.15□□□□□ -0.3
ITSN1-211ENST00000399355 NOL10Q9BSC4 688 aaKnown RBP13.15□□□□□ -0.3
ITSN1-211ENST00000399355 DNAJC18Q9H819 358 aa13.15□□□□□ -0.3
ITSN1-211ENST00000399355 USP40Q9NVE5 1235 aa13.15□□□□□ -0.3
ITSN1-211ENST00000399355 PSMC6P62333 389 aa13.15□□□□□ -0.3
ITSN1-211ENST00000399355 KCNA1Q09470 495 aa13.15□□□□□ -0.3
ITSN1-211ENST00000399355 TBC1D8BQ0IIM8 1120 aa13.15□□□□□ -0.3
ITSN1-211ENST00000399355 TTI2Q6NXR4 508 aa13.15□□□□□ -0.3
ITSN1-211ENST00000399355 ABCB6Q9NP58 842 aa13.15□□□□□ -0.3
ITSN1-211ENST00000399355 PKD2L1Q9P0L9 805 aa13.15□□□□□ -0.3
ITSN1-211ENST00000399355 KIAA1551Q9HCM1 1747 aa13.15□□□□□ -0.3
ITSN1-211ENST00000399355 ADGRF4Q8IZF3 695 aa13.15□□□□□ -0.3
ITSN1-211ENST00000399355 REXO1Q8N1G1 1221 aaKnown RBP13.15□□□□□ -0.3
ITSN1-211ENST00000399355 WDR66Q8TBY9 1149 aa13.15□□□□□ -0.3
ITSN1-211ENST00000399355 TANGO6Q9C0B7 1094 aa13.15□□□□□ -0.3
ITSN1-211ENST00000399355 PDE11AQ9HCR9 933 aa13.15□□□□□ -0.3
ITSN1-211ENST00000399355 BLOC1S4Q9NUP1 217 aa13.15□□□□□ -0.3
ITSN1-211ENST00000399355 DACH1Q9UI36 760 aa13.15□□□□□ -0.3
ITSN1-211ENST00000399355 POTEB3A0JP26 581 aa13.14□□□□□ -0.31
ITSN1-211ENST00000399355 POTECB2RU33 542 aa13.14□□□□□ -0.31
ITSN1-211ENST00000399355 OR52Z1P0C646 297 aa13.14□□□□□ -0.31
ITSN1-211ENST00000399355 GRB10Q13322 594 aa13.14□□□□□ -0.31
ITSN1-211ENST00000399355 FILIP1LQ4L180 1135 aa13.14□□□□□ -0.31
ITSN1-211ENST00000399355 POTEBQ6S5H4 581 aa13.14□□□□□ -0.31
ITSN1-211ENST00000399355 PNMA5Q96PV4 448 aa13.14□□□□□ -0.31
ITSN1-211ENST00000399355 CDCA7Q9BWT1 371 aaPredicted RBP13.14□□□□□ -0.31
ITSN1-211ENST00000399355 CAPN6Q9Y6Q1 641 aa13.14□□□□□ -0.31
ITSN1-211ENST00000399355 AFF2P51816 1311 aa13.14□□□□□ -0.31
ITSN1-211ENST00000399355 ZRANB2O95218 330 aaKnown RBP eCLIP13.14□□□□□ -0.31
ITSN1-211ENST00000399355 IKQ13123 557 aaPredicted RBP13.14□□□□□ -0.31
ITSN1-211ENST00000399355 CCDC122Q5T0U0 273 aa13.14□□□□□ -0.31
ITSN1-211ENST00000399355 DGKHQ86XP1 1220 aa13.14□□□□□ -0.31
ITSN1-211ENST00000399355 TICAM2Q86XR7 235 aa13.14□□□□□ -0.31
ITSN1-211ENST00000399355 MB21D1Q8N884 522 aa13.14□□□□□ -0.31
ITSN1-211ENST00000399355 SBF2Q86WG5 1849 aa13.14□□□□□ -0.31
ITSN1-211ENST00000399355 ZSCAN5CA6NGD5 496 aaPredicted RBP13.14□□□□□ -0.31
ITSN1-211ENST00000399355 KIF5CO60282 957 aa13.14□□□□□ -0.31
ITSN1-211ENST00000399355 NDUFA10O95299 355 aa13.14□□□□□ -0.31
ITSN1-211ENST00000399355 CASP5P51878 434 aa13.14□□□□□ -0.31
ITSN1-211ENST00000399355 C2orf54Q08AI8 447 aa13.14□□□□□ -0.31
ITSN1-211ENST00000399355 TTC19Q6DKK2 380 aaPredicted RBP13.14□□□□□ -0.31
ITSN1-211ENST00000399355 KANK3Q6NY19 840 aa13.14□□□□□ -0.31
ITSN1-211ENST00000399355 C2CD5Q86YS7 1000 aa13.14□□□□□ -0.31
ITSN1-211ENST00000399355 LRWD1Q9UFC0 647 aa13.14□□□□□ -0.31
ITSN1-211ENST00000399355 SEC63Q9UGP8 760 aaKnown RBP13.14□□□□□ -0.31
ITSN1-211ENST00000399355 EPN1Q9Y6I3 576 aaPredicted RBP13.14□□□□□ -0.31
ITSN1-211ENST00000399355 NRAPQ86VF7 1730 aa13.13□□□□□ -0.31
ITSN1-211ENST00000399355 POTEFA5A3E0 1075 aa13.13□□□□□ -0.31
ITSN1-211ENST00000399355 POTEIP0CG38 1075 aa13.13□□□□□ -0.31
ITSN1-211ENST00000399355 VPS72Q15906 364 aa13.13□□□□□ -0.31
ITSN1-211ENST00000399355 SBK1Q52WX2 424 aa13.13□□□□□ -0.31
ITSN1-211ENST00000399355 FOXR1Q6PIV2 292 aa13.13□□□□□ -0.31
ITSN1-211ENST00000399355 POTEGQ6S5H5 508 aa13.13□□□□□ -0.31
ITSN1-211ENST00000399355 POTEEQ6S8J3 1075 aa13.13□□□□□ -0.31
ITSN1-211ENST00000399355 SNX29Q8TEQ0 813 aa13.13□□□□□ -0.31
ITSN1-211ENST00000399355 MS4A14Q96JA4 679 aa13.13□□□□□ -0.31
ITSN1-211ENST00000399355 RWDD2AQ9UIY3 292 aa13.13□□□□□ -0.31
ITSN1-211ENST00000399355 USP34Q70CQ2 3546 aa13.13□□□□□ -0.31
ITSN1-211ENST00000399355 DDX60LQ5H9U9 1706 aaKnown RBP13.13□□□□□ -0.31
ITSN1-211ENST00000399355 COL5A3P25940 1745 aaPredicted RBP13.13□□□□□ -0.31
ITSN1-211ENST00000399355 MARCH6O60337 910 aa13.13□□□□□ -0.31
ITSN1-211ENST00000399355 TXLNAP40222 546 aa13.13□□□□□ -0.31
ITSN1-211ENST00000399355 NONOQ15233 471 aaKnown RBP eCLIP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms