RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 GLI4P10075 376 aa5.64□□□□□ -1.51
TRAV40-201ENST00000390467 TCF3P15923 654 aa5.64□□□□□ -1.51
TRAV40-201ENST00000390467 HOXA5P20719 270 aa5.64□□□□□ -1.51
TRAV40-201ENST00000390467 LIMS1P48059 325 aa5.64□□□□□ -1.51
TRAV40-201ENST00000390467 SEPHS1P49903 392 aa5.64□□□□□ -1.51
TRAV40-201ENST00000390467 AFF3P51826 1226 aaKnown RBP5.64□□□□□ -1.51
TRAV40-201ENST00000390467 CYP4F3Q08477 520 aa5.64□□□□□ -1.51
TRAV40-201ENST00000390467 NR1I3Q14994 352 aa5.64□□□□□ -1.51
TRAV40-201ENST00000390467 CPNE8Q86YQ8 564 aa5.64□□□□□ -1.51
TRAV40-201ENST00000390467 NLGN2Q8NFZ4 835 aa5.64□□□□□ -1.51
TRAV40-201ENST00000390467 KCNC2Q96PR1 638 aa5.64□□□□□ -1.51
TRAV40-201ENST00000390467 GULP1Q9UBP9 304 aa5.64□□□□□ -1.51
TRAV40-201ENST00000390467 AKT3Q9Y243 479 aa5.64□□□□□ -1.51
TRAV40-201ENST00000390467 IRS2Q9Y4H2 1338 aa5.64□□□□□ -1.51
TRAV40-201ENST00000390467 A0A1W2PQJ5 194 aa5.63□□□□□ -1.51
TRAV40-201ENST00000390467 TBX1O43435 398 aa5.63□□□□□ -1.51
TRAV40-201ENST00000390467 BUB1BO60566 1050 aaPredicted RBP5.63□□□□□ -1.51
TRAV40-201ENST00000390467 PRR5P85299 388 aa5.63□□□□□ -1.51
TRAV40-201ENST00000390467 SCRN1Q12765 414 aa5.63□□□□□ -1.51
TRAV40-201ENST00000390467 CNKSR3Q6P9H4 555 aa5.63□□□□□ -1.51
TRAV40-201ENST00000390467 LILRA6Q6PI73 481 aa5.63□□□□□ -1.51
TRAV40-201ENST00000390467 C6orf15Q6UXA7 325 aaPredicted RBP5.63□□□□□ -1.51
TRAV40-201ENST00000390467 TMEM151BQ8IW70 566 aa5.63□□□□□ -1.51
TRAV40-201ENST00000390467 C20orf173Q96LM9 149 aa5.63□□□□□ -1.51
TRAV40-201ENST00000390467 MTA3Q9BTC8 594 aa5.63□□□□□ -1.51
TRAV40-201ENST00000390467 KRTAP4-9Q9BYQ8 210 aa5.63□□□□□ -1.51
TRAV40-201ENST00000390467 BCAS3Q9H6U6 928 aa5.63□□□□□ -1.51
TRAV40-201ENST00000390467 CAPN10Q9HC96 672 aa5.63□□□□□ -1.51
TRAV40-201ENST00000390467 PARD6AQ9NPB6 346 aa5.63□□□□□ -1.51
TRAV40-201ENST00000390467 CLEC1BQ9P126 229 aa5.63□□□□□ -1.51
TRAV40-201ENST00000390467 A0A0G2JLL6 359 aaPredicted RBP5.62□□□□□ -1.51
TRAV40-201ENST00000390467 NPHP3-ACAD11A0A0J9YXS1 232 aa5.62□□□□□ -1.51
TRAV40-201ENST00000390467 F8W031 263 aaPredicted RBP5.62□□□□□ -1.51
TRAV40-201ENST00000390467 MC3RP41968 323 aa5.62□□□□□ -1.51
TRAV40-201ENST00000390467 GTF2IRD2BQ6EKJ0 949 aa5.62□□□□□ -1.51
TRAV40-201ENST00000390467 MRM1Q6IN84 353 aaKnown RBP5.62□□□□□ -1.51
TRAV40-201ENST00000390467 GTF2IRD2Q86UP8 949 aa5.62□□□□□ -1.51
TRAV40-201ENST00000390467 TRIM59Q8IWR1 403 aa5.62□□□□□ -1.51
TRAV40-201ENST00000390467 LZTR1Q8N653 840 aa5.62□□□□□ -1.51
TRAV40-201ENST00000390467 MARCH10Q8NA82 808 aaPredicted RBP5.62□□□□□ -1.51
TRAV40-201ENST00000390467 MICAL1Q8TDZ2 1067 aa5.62□□□□□ -1.51
TRAV40-201ENST00000390467 COPS5Q92905 334 aa5.62□□□□□ -1.51
TRAV40-201ENST00000390467 MRGPRX3Q96LB0 322 aa5.62□□□□□ -1.51
TRAV40-201ENST00000390467 TINF2Q9BSI4 451 aa5.62□□□□□ -1.51
TRAV40-201ENST00000390467 GPRC5CQ9NQ84 441 aa5.62□□□□□ -1.51
TRAV40-201ENST00000390467 ACTR10Q9NZ32 417 aa5.62□□□□□ -1.51
TRAV40-201ENST00000390467 RAPGEFL1Q9UHV5 662 aa5.62□□□□□ -1.51
TRAV40-201ENST00000390467 C7orf72A4D263 438 aa5.61□□□□□ -1.51
TRAV40-201ENST00000390467 PLA2G1BP04054 148 aaKnown RBP5.61□□□□□ -1.51
TRAV40-201ENST00000390467 THBDP07204 575 aa5.61□□□□□ -1.51
TRAV40-201ENST00000390467 FGRP09769 529 aa5.61□□□□□ -1.51
TRAV40-201ENST00000390467 PLS3P13797 630 aa5.61□□□□□ -1.51
TRAV40-201ENST00000390467 ATF2P15336 505 aa5.61□□□□□ -1.51
TRAV40-201ENST00000390467 PAMP19021 973 aa5.61□□□□□ -1.51
TRAV40-201ENST00000390467 ETFBP38117 255 aa5.61□□□□□ -1.51
TRAV40-201ENST00000390467 NCAPHQ15003 741 aa5.61□□□□□ -1.51
TRAV40-201ENST00000390467 LARP1BQ659C4 914 aaKnown RBP5.61□□□□□ -1.51
TRAV40-201ENST00000390467 BVESQ8NE79 360 aa5.61□□□□□ -1.51
TRAV40-201ENST00000390467 PWWP2AQ96N64 755 aa5.61□□□□□ -1.51
TRAV40-201ENST00000390467 APBA2Q99767 749 aa5.61□□□□□ -1.51
TRAV40-201ENST00000390467 ZCCHC4Q9H5U6 513 aa5.61□□□□□ -1.51
TRAV40-201ENST00000390467 CCDC9Q9Y3X0 531 aaKnown RBP5.61□□□□□ -1.51
TRAV40-201ENST00000390467 SSBP05455 408 aaKnown RBP eCLIP5.6□□□□□ -1.51
TRAV40-201ENST00000390467 ZNF143P52747 638 aaPredicted RBP5.6□□□□□ -1.51
TRAV40-201ENST00000390467 FAM178BQ8IXR5 827 aa5.6□□□□□ -1.51
TRAV40-201ENST00000390467 TP53I13Q8NBR0 393 aaPredicted RBP5.6□□□□□ -1.51
TRAV40-201ENST00000390467 SYT8Q8NBV8 401 aa5.6□□□□□ -1.51
TRAV40-201ENST00000390467 NPLOC4Q8TAT6 608 aa5.6□□□□□ -1.51
TRAV40-201ENST00000390467 BTN2A2Q8WVV5 523 aa5.6□□□□□ -1.51
TRAV40-201ENST00000390467 DPF3Q92784 378 aa5.6□□□□□ -1.51
TRAV40-201ENST00000390467 PPP1R14AQ96A00 147 aa5.6□□□□□ -1.51
TRAV40-201ENST00000390467 PRKAG3Q9UGI9 489 aa5.6□□□□□ -1.51
TRAV40-201ENST00000390467 FFAR3O14843 346 aa5.59□□□□□ -1.51
TRAV40-201ENST00000390467 ASGR2P07307 311 aa5.59□□□□□ -1.51
TRAV40-201ENST00000390467 PFKLP17858 780 aa5.59□□□□□ -1.51
TRAV40-201ENST00000390467 PMLP29590 882 aa5.59□□□□□ -1.51
TRAV40-201ENST00000390467 INF2Q27J81 1249 aa5.59□□□□□ -1.51
TRAV40-201ENST00000390467 WWC2Q6AWC2 1192 aa5.59□□□□□ -1.51
TRAV40-201ENST00000390467 POMZP3Q6PJE2 187 aa5.59□□□□□ -1.51
TRAV40-201ENST00000390467 ZNF227Q86WZ6 799 aa5.59□□□□□ -1.51
TRAV40-201ENST00000390467 MCF2L2Q86YR7 1114 aa5.59□□□□□ -1.51
TRAV40-201ENST00000390467 NETO2Q8NC67 525 aa5.59□□□□□ -1.51
TRAV40-201ENST00000390467 FEZF2Q8TBJ5 459 aa5.59□□□□□ -1.51
TRAV40-201ENST00000390467 FRS2Q8WU20 508 aa5.59□□□□□ -1.51
TRAV40-201ENST00000390467 XYLT2Q9H1B5 865 aa5.59□□□□□ -1.51
TRAV40-201ENST00000390467 NKX2-4Q9H2Z4 354 aa5.59□□□□□ -1.51
TRAV40-201ENST00000390467 ZNF408Q9H9D4 720 aa5.59□□□□□ -1.51
TRAV40-201ENST00000390467 DBR1Q9UK59 544 aaKnown RBP5.59□□□□□ -1.51
TRAV40-201ENST00000390467 SIT1Q9Y3P8 196 aa5.59□□□□□ -1.51
TRAV40-201ENST00000390467 ARNTLO00327 626 aa5.58□□□□□ -1.52
TRAV40-201ENST00000390467 SUSD5O60279 629 aa5.58□□□□□ -1.52
TRAV40-201ENST00000390467 NPHS1O60500 1241 aa5.58□□□□□ -1.52
TRAV40-201ENST00000390467 FUCA1P04066 466 aa5.58□□□□□ -1.52
TRAV40-201ENST00000390467 ITGAVP06756 1048 aa5.58□□□□□ -1.52
TRAV40-201ENST00000390467 NAT2P11245 290 aa5.58□□□□□ -1.52
TRAV40-201ENST00000390467 CTSWP56202 376 aa5.58□□□□□ -1.52
TRAV40-201ENST00000390467 VWA3BQ502W6 1294 aa5.58□□□□□ -1.52
TRAV40-201ENST00000390467 TNNI3KQ59H18 835 aa5.58□□□□□ -1.52
TRAV40-201ENST00000390467 CABP7Q86V35 215 aa5.58□□□□□ -1.52
TRAV40-201ENST00000390467 CCDC103Q8IW40 242 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms