RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 ZNF711Q9Y462 761 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 MAP3K13O43283 966 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 PRPF3O43395 683 aaKnown RBP9.44□□□□□ -0.9
TDP1-201ENST00000335725 TACC1O75410 805 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 CHGBP05060 677 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 ZC3H6P61129 1189 aaKnown RBP9.44□□□□□ -0.9
TDP1-201ENST00000335725 TBX2Q13207 712 aaPredicted RBP9.44□□□□□ -0.9
TDP1-201ENST00000335725 CNPY1Q3B7I2 92 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 C3orf62Q6ZUJ4 267 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 LONP2Q86WA8 852 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 DNAJC9Q8WXX5 260 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 CAVIN3Q969G5 261 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 SKA1Q96BD8 255 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 RRP36Q96EU6 259 aaKnown RBP9.44□□□□□ -0.9
TDP1-201ENST00000335725 PPP1R12CQ9BZL4 782 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 RSPH9Q9H1X1 276 aaPredicted RBP9.44□□□□□ -0.9
TDP1-201ENST00000335725 ATAD3AQ9NVI7 634 aa9.44□□□□□ -0.9
TDP1-201ENST00000335725 PPRC1Q5VV67 1664 aaKnown RBP9.43□□□□□ -0.9
TDP1-201ENST00000335725 LMNB1P20700 586 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 BDNFP23560 247 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 ATICP31939 592 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 HALP42357 657 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 PEX5P50542 639 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 HPCAP84074 193 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 CYLC2Q14093 348 aaPredicted RBP9.43□□□□□ -0.9
TDP1-201ENST00000335725 KAZNQ674X7 775 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 NLRP9Q7RTR0 991 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 RAB11FIP4Q86YS3 637 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 SH2D3CQ8N5H7 860 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 HPS3Q969F9 1004 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 SPATA16Q9BXB7 569 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 KCNMB3Q9NPA1 279 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 SAP30BPQ9UHR5 308 aaKnown RBP9.43□□□□□ -0.9
TDP1-201ENST00000335725 TTC7AQ9ULT0 858 aaPredicted RBP9.43□□□□□ -0.9
TDP1-201ENST00000335725 NPATQ14207 1427 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 ZFYP08048 801 aaPredicted RBP9.43□□□□□ -0.9
TDP1-201ENST00000335725 POLR2EP19388 210 aaKnown RBP9.43□□□□□ -0.9
TDP1-201ENST00000335725 MYL5Q02045 173 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 MIGA1Q8NAN2 632 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 RBM46Q8TBY0 533 aaKnown RBP9.43□□□□□ -0.9
TDP1-201ENST00000335725 CAGE1Q8TC20 777 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 MORC4Q8TE76 937 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 APPBP2Q92624 585 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 RAB3IPQ96QF0 476 aaPredicted RBP9.43□□□□□ -0.9
TDP1-201ENST00000335725 NPHP4O75161 1426 aaPredicted RBP9.43□□□□□ -0.9
TDP1-201ENST00000335725 BOLA2-SMG1P6H3BVE0 249 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 AMPD2Q01433 879 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 MTX1Q13505 466 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 SYDE2Q5VT97 1194 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 NCAPH2Q6IBW4 605 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 CFAP61Q8NHU2 1237 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 BTBD7Q9P203 1132 aa9.43□□□□□ -0.9
TDP1-201ENST00000335725 EIF4G3O43432 1585 aaKnown RBP9.42□□□□□ -0.9
TDP1-201ENST00000335725 MAP4K4O95819 1239 aaPredicted RBP9.42□□□□□ -0.9
TDP1-201ENST00000335725 ALDH2P05091 517 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 ALDH5A1P51649 535 aaPredicted RBP9.42□□□□□ -0.9
TDP1-201ENST00000335725 CACNA2D1P54289 1103 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 PDE1AP54750 535 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 KPNB1Q14974 876 aaKnown RBP9.42□□□□□ -0.9
TDP1-201ENST00000335725 MUM1Q2TAK8 710 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 FAM173BQ6P4H8 233 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 CLASRPQ8N2M8 674 aaKnown RBP9.42□□□□□ -0.9
TDP1-201ENST00000335725 TC2NQ8N9U0 490 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 FBXW7Q969H0 707 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 API5Q9BZZ5 524 aaKnown RBP9.42□□□□□ -0.9
TDP1-201ENST00000335725 NDEL1Q9GZM8 345 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 CLK4Q9HAZ1 481 aaKnown RBP9.42□□□□□ -0.9
TDP1-201ENST00000335725 COMMD8Q9NX08 183 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 IL1RAPL1Q9NZN1 696 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 SAR1BQ9Y6B6 198 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 NCAPHQ15003 741 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 DPCR1Q3MIW9 517 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 BOLA3Q53S33 107 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 CCDC102BQ68D86 513 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 RASGRP2Q7LDG7 609 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 SPICE1Q8N0Z3 855 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 ITPKCQ96DU7 683 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 ZIM3Q96PE6 472 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 CABP1Q9NZU7 370 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 CHPF2Q9P2E5 772 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 RASAL2Q9UJF2 1139 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 USH1CQ9Y6N9 552 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 AKR1B15C9JRZ8 316 aaPredicted RBP9.42□□□□□ -0.9
TDP1-201ENST00000335725 MATN2O00339 956 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 GSTT2P0CG29 244 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 GSTT2BP0CG30 244 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 HSPA1AP0DMV8 641 aaKnown RBP9.42□□□□□ -0.9
TDP1-201ENST00000335725 HSPA1BP0DMV9 641 aaKnown RBP9.42□□□□□ -0.9
TDP1-201ENST00000335725 CPA3P15088 417 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 ENPP1P22413 925 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 CASP14P31944 242 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 MSH2P43246 934 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 TMED10P49755 219 aaKnown RBP9.42□□□□□ -0.9
TDP1-201ENST00000335725 GUCY2DQ02846 1103 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 TBL3Q12788 808 aaKnown RBP9.42□□□□□ -0.9
TDP1-201ENST00000335725 MSLNQ13421 630 aaPredicted RBP9.42□□□□□ -0.9
TDP1-201ENST00000335725 FKBP15Q5T1M5 1219 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.42□□□□□ -0.9
TDP1-201ENST00000335725 TRAPPC11Q7Z392 1133 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 ACMSDQ8TDX5 336 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms