RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 PDE4DQ08499 809 aa5.9□□□□□ -1.47
LRIT3-201ENST00000327908 HSP90AA2PQ14568 343 aaPredicted RBP5.9□□□□□ -1.47
LRIT3-201ENST00000327908 STXBP2Q15833 593 aa5.9□□□□□ -1.47
LRIT3-201ENST00000327908 TREML2Q5T2D2 321 aa5.9□□□□□ -1.47
LRIT3-201ENST00000327908 CHST3Q7LGC8 479 aa5.9□□□□□ -1.47
LRIT3-201ENST00000327908 DPP9Q86TI2 863 aa5.9□□□□□ -1.47
LRIT3-201ENST00000327908 SPICE1Q8N0Z3 855 aa5.9□□□□□ -1.47
LRIT3-201ENST00000327908 FAM43AQ8N2R8 423 aa5.9□□□□□ -1.47
LRIT3-201ENST00000327908 IPO9Q96P70 1041 aaKnown RBP5.9□□□□□ -1.47
LRIT3-201ENST00000327908 PHF20Q9BVI0 1012 aa5.9□□□□□ -1.47
LRIT3-201ENST00000327908 EFCC1Q9HA90 598 aa5.9□□□□□ -1.47
LRIT3-201ENST00000327908 KCNG1Q9UIX4 513 aa5.9□□□□□ -1.47
LRIT3-201ENST00000327908 CNPY2Q9Y2B0 182 aa5.9□□□□□ -1.47
LRIT3-201ENST00000327908 JAG1P78504 1218 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 LACTBP83111 547 aaPredicted RBP5.89□□□□□ -1.47
LRIT3-201ENST00000327908 CRHR2Q13324 411 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 CCDC174Q6PII3 467 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 MAMDC4Q6UXC1 1216 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 ERMNQ8TAM6 284 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 FAM20AQ96MK3 541 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 GBP4Q96PP9 640 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 WDR11Q9BZH6 1224 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 FAM217BQ9NTX9 383 aaPredicted RBP5.89□□□□□ -1.47
LRIT3-201ENST00000327908 IGF2BP3O00425 579 aaKnown RBP eCLIP5.89□□□□□ -1.47
LRIT3-201ENST00000327908 PLEKHA8P1O95397 391 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 ERCC3P19447 782 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 SCP2P22307 547 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 CIITAP33076 1130 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 ZNF76P36508 570 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 SREBF1P36956 1147 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 NEDD9Q14511 834 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 TMEM132BQ14DG7 1078 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 ARHGEF16Q5VV41 709 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 PCNX4Q63HM2 1172 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 HOMER1Q86YM7 354 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 RAVER2Q9HCJ3 691 aaKnown RBP5.89□□□□□ -1.47
LRIT3-201ENST00000327908 INCENPQ9NQS7 918 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 RBPJLQ9UBG7 517 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 SRRDQ9UH36 339 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 USP25Q9UHP3 1055 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 MYH6P13533 1939 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 PHLPP2Q6ZVD8 1323 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 RPTORQ8N122 1335 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 EIF3JO75822 258 aaKnown RBP5.89□□□□□ -1.47
LRIT3-201ENST00000327908 HMGCRP04035 888 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 NCLP19338 710 aaKnown RBP5.89□□□□□ -1.47
LRIT3-201ENST00000327908 CDC27P30260 824 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 ADD1P35611 737 aaKnown RBP5.89□□□□□ -1.47
LRIT3-201ENST00000327908 TXLNAP40222 546 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 PRPHP41219 470 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 STK3Q13188 491 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 MORN1Q5T089 497 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 KRT40Q6A162 431 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 WWC2Q6AWC2 1192 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 IQSEC1Q6DN90 963 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 GPR142Q7Z601 462 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 NEK8Q86SG6 692 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 ANO3Q9BYT9 981 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 LRRC27Q9C0I9 530 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 SCAND2PQ9GZW5 306 aaPredicted RBP5.89□□□□□ -1.47
LRIT3-201ENST00000327908 ABHD16BQ9H3Z7 469 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 VAT1LQ9HCJ6 419 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 TBC1D22BQ9NU19 505 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 NFASCO94856 1347 aa5.89□□□□□ -1.47
LRIT3-201ENST00000327908 STX6O43752 255 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 CNMDO75829 334 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 ICAM3P32942 547 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 ABCD1P33897 745 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 SEMA3FQ13275 785 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 ARL6IP4Q66PJ3 421 aaKnown RBP5.88□□□□□ -1.47
LRIT3-201ENST00000327908 PPP4R3AQ6IN85 833 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 FBXO46Q6PJ61 603 aaPredicted RBP5.88□□□□□ -1.47
LRIT3-201ENST00000327908 STAG2Q8N3U4 1231 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 RAET1EQ8TD07 263 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 SCFD2Q8WU76 684 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 FERMT2Q96AC1 680 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 UBA5Q9GZZ9 404 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 MTMR7Q9Y216 660 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 TAF6LQ9Y6J9 622 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 DNAJC25-GNG10A0A024R161 153 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 CYP3A7-CYP3A51PA0A087WV96 503 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 FIBPO43427 364 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 MARCH6O60337 910 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 CABYRO75952 493 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 YEATS4O95619 227 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 CYP3A7P24462 503 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 SFNP31947 248 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 PSMC4P43686 418 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 TTLL4Q14679 1199 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 TTBK2Q6IQ55 1244 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 NSMFQ6X4W1 530 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 CPXCR1Q8N123 301 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 ANKRD13CQ8N6S4 541 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 FAM133AQ8N9E0 248 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 AK8Q96MA6 479 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 NUP88Q99567 741 aaPredicted RBP5.88□□□□□ -1.47
LRIT3-201ENST00000327908 SENP7Q9BQF6 1050 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 U2AF2P26368 475 aaKnown RBP eCLIP5.88□□□□□ -1.47
LRIT3-201ENST00000327908 JAK3P52333 1124 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 WDR78Q5VTH9 848 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms