RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 INCENPQ9NQS7 918 aa9.86□□□□□ -0.83
MSL3-201ENST00000312196 PRDM5Q9NQX1 630 aaPredicted RBP9.86□□□□□ -0.83
MSL3-201ENST00000312196 MRPL11Q9Y3B7 192 aaKnown RBP9.86□□□□□ -0.83
MSL3-201ENST00000312196 ASTN1O14525 1302 aa9.86□□□□□ -0.83
MSL3-201ENST00000312196 FOSL2P15408 326 aa9.85□□□□□ -0.83
MSL3-201ENST00000312196 CHMLP26374 656 aa9.85□□□□□ -0.83
MSL3-201ENST00000312196 CNTN2Q02246 1040 aa9.85□□□□□ -0.83
MSL3-201ENST00000312196 SESTD1Q86VW0 696 aa9.85□□□□□ -0.83
MSL3-201ENST00000312196 STK11IPQ8N1F8 1099 aa9.85□□□□□ -0.83
MSL3-201ENST00000312196 PNMA1Q8ND90 353 aa9.85□□□□□ -0.83
MSL3-201ENST00000312196 EMID1Q96A84 441 aaPredicted RBP9.85□□□□□ -0.83
MSL3-201ENST00000312196 PGK1P00558 417 aa9.85□□□□□ -0.83
MSL3-201ENST00000312196 BAATQ14032 418 aaPredicted RBP9.85□□□□□ -0.83
MSL3-201ENST00000312196 GRM4Q14833 912 aa9.85□□□□□ -0.83
MSL3-201ENST00000312196 TTBK2Q6IQ55 1244 aa9.85□□□□□ -0.83
MSL3-201ENST00000312196 CWC27Q6UX04 472 aaKnown RBP9.85□□□□□ -0.83
MSL3-201ENST00000312196 RNF207Q6ZRF8 634 aa9.85□□□□□ -0.83
MSL3-201ENST00000312196 HOMEZQ8IX15 550 aa9.85□□□□□ -0.83
MSL3-201ENST00000312196 RPUSD2Q8IZ73 545 aaKnown RBP9.85□□□□□ -0.83
MSL3-201ENST00000312196 ENAHQ8N8S7 591 aaPredicted RBP9.85□□□□□ -0.83
MSL3-201ENST00000312196 TIFAQ96CG3 184 aa9.85□□□□□ -0.83
MSL3-201ENST00000312196 ZSWIM5Q9P217 1185 aa9.85□□□□□ -0.83
MSL3-201ENST00000312196 SMCHD1A6NHR9 2005 aa9.84□□□□□ -0.83
MSL3-201ENST00000312196 PALM3A6NDB9 673 aaPredicted RBP9.84□□□□□ -0.83
MSL3-201ENST00000312196 SGSM2O43147 1006 aa9.84□□□□□ -0.83
MSL3-201ENST00000312196 ASGR1P07306 291 aa9.84□□□□□ -0.83
MSL3-201ENST00000312196 PARP1P09874 1014 aaKnown RBP9.84□□□□□ -0.83
MSL3-201ENST00000312196 GSPT1P15170 499 aaKnown RBP9.84□□□□□ -0.83
MSL3-201ENST00000312196 SMPD1P17405 629 aa9.84□□□□□ -0.83
MSL3-201ENST00000312196 CPT1AP50416 773 aa9.84□□□□□ -0.83
MSL3-201ENST00000312196 HSD17B4P51659 736 aa9.84□□□□□ -0.83
MSL3-201ENST00000312196 FSCN1Q16658 493 aaKnown RBP9.84□□□□□ -0.83
MSL3-201ENST00000312196 RRP12Q5JTH9 1297 aaKnown RBP9.84□□□□□ -0.83
MSL3-201ENST00000312196 KCNV1Q6PIU1 500 aa9.84□□□□□ -0.83
MSL3-201ENST00000312196 FAM43BQ6ZT52 329 aaPredicted RBP9.84□□□□□ -0.83
MSL3-201ENST00000312196 SCFD2Q8WU76 684 aa9.84□□□□□ -0.83
MSL3-201ENST00000312196 LZTS2Q9BRK4 669 aa9.84□□□□□ -0.83
MSL3-201ENST00000312196 MSRAQ9UJ68 235 aa9.84□□□□□ -0.83
MSL3-201ENST00000312196 PARNO95453 639 aaKnown RBP9.84□□□□□ -0.83
MSL3-201ENST00000312196 EPHB4P54760 987 aa9.84□□□□□ -0.83
MSL3-201ENST00000312196 RBL2Q08999 1139 aa9.84□□□□□ -0.83
MSL3-201ENST00000312196 BRDTQ58F21 947 aaPredicted RBP9.84□□□□□ -0.83
MSL3-201ENST00000312196 B4GALNT3Q6L9W6 998 aa9.84□□□□□ -0.83
MSL3-201ENST00000312196 SAMD1Q6SPF0 538 aaPredicted RBP9.84□□□□□ -0.83
MSL3-201ENST00000312196 TLK2Q86UE8 772 aa9.84□□□□□ -0.83
MSL3-201ENST00000312196 PHOSPHO2Q8TCD6 241 aa9.84□□□□□ -0.83
MSL3-201ENST00000312196 MAP4K1Q92918 833 aa9.84□□□□□ -0.83
MSL3-201ENST00000312196 GAS2L1Q99501 681 aaPredicted RBP9.84□□□□□ -0.83
MSL3-201ENST00000312196 RIOX1Q9H6W3 641 aa9.84□□□□□ -0.83
MSL3-201ENST00000312196 GPCPD1Q9NPB8 672 aa9.84□□□□□ -0.83
MSL3-201ENST00000312196 TOMM22Q9NS69 142 aa9.84□□□□□ -0.83
MSL3-201ENST00000312196 FRMPD4Q14CM0 1322 aa9.84□□□□□ -0.83
MSL3-201ENST00000312196 A6NJR5 290 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 ADCY6O43306 1168 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 KDM4AO75164 1064 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 STAM2O75886 525 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 SUPT20HL2P0C7V6 817 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 HOXD8P13378 290 aaPredicted RBP9.83□□□□□ -0.84
MSL3-201ENST00000312196 DNAJB2P25686 324 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 ITGB8P26012 769 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 TMTC2Q8N394 836 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 MYLIPQ8WY64 445 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 FERMT2Q96AC1 680 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 UBAC1Q9BSL1 405 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 MTG1Q9BT17 334 aaPredicted RBP9.83□□□□□ -0.84
MSL3-201ENST00000312196 ZNF576Q9H609 170 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 SUPT16HQ9Y5B9 1047 aaKnown RBP9.83□□□□□ -0.84
MSL3-201ENST00000312196 PCDHA11Q9Y5I1 949 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 CEP290O15078 2479 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 TNKSO95271 1327 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 MCM3APO60318 1980 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 MYADML2A6NDP7 307 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 HAND2P61296 217 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 TRDNQ13061 729 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 CDC37Q16543 378 aaPredicted RBP9.83□□□□□ -0.84
MSL3-201ENST00000312196 GNASQ5JWF2 1037 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 XRRA1Q6P2D8 792 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 NFRKBQ6P4R8 1299 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 CCDC62Q6P9F0 684 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 FBXO11Q86XK2 927 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 ADGRF4Q8IZF3 695 aa9.83□□□□□ -0.84
MSL3-201ENST00000312196 NSUN6Q8TEA1 469 aaKnown RBP9.83□□□□□ -0.84
MSL3-201ENST00000312196 TSPYL2Q9H2G4 693 aaPredicted RBP9.83□□□□□ -0.84
MSL3-201ENST00000312196 B4E1Z4 1266 aa9.82□□□□□ -0.84
MSL3-201ENST00000312196 NFIBO00712 420 aa9.82□□□□□ -0.84
MSL3-201ENST00000312196 PQBP1O60828 265 aaKnown RBP9.82□□□□□ -0.84
MSL3-201ENST00000312196 DDAH1O94760 285 aa9.82□□□□□ -0.84
MSL3-201ENST00000312196 C6orf222P0C671 652 aaPredicted RBP9.82□□□□□ -0.84
MSL3-201ENST00000312196 RPS6P62753 249 aaKnown RBP9.82□□□□□ -0.84
MSL3-201ENST00000312196 PDE4DQ08499 809 aa9.82□□□□□ -0.84
MSL3-201ENST00000312196 IFIT1BQ5T764 474 aaKnown RBP9.82□□□□□ -0.84
MSL3-201ENST00000312196 NSMFQ6X4W1 530 aa9.82□□□□□ -0.84
MSL3-201ENST00000312196 NCOA7Q8NI08 942 aa9.82□□□□□ -0.84
MSL3-201ENST00000312196 SYTL5Q8TDW5 730 aaPredicted RBP9.82□□□□□ -0.84
MSL3-201ENST00000312196 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.82□□□□□ -0.844e-7■□□□□ 8.1
MSL3-201ENST00000312196 AMNQ9BXJ7 453 aa9.82□□□□□ -0.84
MSL3-201ENST00000312196 JMJD4Q9H9V9 463 aa9.82□□□□□ -0.84
MSL3-201ENST00000312196 SCN10AQ9Y5Y9 1956 aa9.82□□□□□ -0.84
MSL3-201ENST00000312196 FRMPD2Q68DX3 1309 aaPredicted RBP9.82□□□□□ -0.84
MSL3-201ENST00000312196 KIAA1217Q5T5P2 1943 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms