RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 TNFAIP2Q03169 654 aa23.15■■□□□ 1.3
PDZRN3-202ENST00000308537 TRDNQ13061 729 aa23.15■■□□□ 1.3
PDZRN3-202ENST00000308537 NECTIN1Q15223 517 aa23.15■■□□□ 1.3
PDZRN3-202ENST00000308537 EEPD1Q7L9B9 569 aa23.15■■□□□ 1.3
PDZRN3-202ENST00000308537 TRIM43Q96BQ3 446 aaPredicted RBP23.15■■□□□ 1.3
PDZRN3-202ENST00000308537 VTA1Q9NP79 307 aa23.15■■□□□ 1.3
PDZRN3-202ENST00000308537 COL20A1Q9P218 1284 aa23.15■■□□□ 1.3
PDZRN3-202ENST00000308537 RBM47A0AV96 593 aaKnown RBP23.14■■□□□ 1.29
PDZRN3-202ENST00000308537 ASGR1P07306 291 aa23.14■■□□□ 1.29
PDZRN3-202ENST00000308537 C6orf222P0C671 652 aaPredicted RBP23.14■■□□□ 1.29
PDZRN3-202ENST00000308537 CALML3P27482 149 aa23.14■■□□□ 1.29
PDZRN3-202ENST00000308537 GRM4Q14833 912 aa23.14■■□□□ 1.29
PDZRN3-202ENST00000308537 GPHNQ9NQX3 736 aaPredicted RBP23.14■■□□□ 1.29
PDZRN3-202ENST00000308537 ADD3Q9UEY8 706 aaKnown RBP23.14■■□□□ 1.29
PDZRN3-202ENST00000308537 KLRF2D3W0D1 207 aa23.13■■□□□ 1.29
PDZRN3-202ENST00000308537 IFIT3O14879 490 aaKnown RBP23.13■■□□□ 1.29
PDZRN3-202ENST00000308537 SLC27A2O14975 620 aa23.13■■□□□ 1.29
PDZRN3-202ENST00000308537 CYTH3O43739 400 aa23.13■■□□□ 1.29
PDZRN3-202ENST00000308537 CDK7P50613 346 aa23.13■■□□□ 1.29
PDZRN3-202ENST00000308537 BEX3Q00994 111 aa23.13■■□□□ 1.29
PDZRN3-202ENST00000308537 GHRHRQ02643 423 aa23.13■■□□□ 1.29
PDZRN3-202ENST00000308537 ANKRD33Q7Z3H0 272 aa23.13■■□□□ 1.29
PDZRN3-202ENST00000308537 MAF1Q9H063 256 aa23.13■■□□□ 1.29
PDZRN3-202ENST00000308537 ABCB11O95342 1321 aa23.12■■□□□ 1.29
PDZRN3-202ENST00000308537 IQSEC1Q6DN90 963 aa23.12■■□□□ 1.29
PDZRN3-202ENST00000308537 RALYLQ86SE5 291 aaKnown RBP23.12■■□□□ 1.29
PDZRN3-202ENST00000308537 TLK2Q86UE8 772 aa23.12■■□□□ 1.29
PDZRN3-202ENST00000308537 TDHQ8IZJ6 230 aa23.12■■□□□ 1.29
PDZRN3-202ENST00000308537 DNERQ8NFT8 737 aa23.12■■□□□ 1.29
PDZRN3-202ENST00000308537 SYTL5Q8TDW5 730 aaPredicted RBP23.12■■□□□ 1.29
PDZRN3-202ENST00000308537 RIOX1Q9H6W3 641 aa23.12■■□□□ 1.29
PDZRN3-202ENST00000308537 LY9Q9HBG7 655 aa23.12■■□□□ 1.29
PDZRN3-202ENST00000308537 VAT1LQ9HCJ6 419 aa23.12■■□□□ 1.29
PDZRN3-202ENST00000308537 STARD7Q9NQZ5 370 aa23.12■■□□□ 1.29
PDZRN3-202ENST00000308537 KIAA1217Q5T5P2 1943 aa23.12■■□□□ 1.29
PDZRN3-202ENST00000308537 ELP1O95163 1332 aa23.11■■□□□ 1.29
PDZRN3-202ENST00000308537 PCSK9Q8NBP7 692 aaKnown RBP23.11■■□□□ 1.29
PDZRN3-202ENST00000308537 LRCH3Q96II8 777 aa23.11■■□□□ 1.29
PDZRN3-202ENST00000308537 TOX2Q96NM4 488 aa23.11■■□□□ 1.29
PDZRN3-202ENST00000308537 UBE2OQ9C0C9 1292 aaKnown RBP23.11■■□□□ 1.29
PDZRN3-202ENST00000308537 Q9Y3F1 56 aa23.11■■□□□ 1.29
PDZRN3-202ENST00000308537 FAAP100Q0VG06 881 aa23.1■■□□□ 1.29
PDZRN3-202ENST00000308537 WTAPQ15007 396 aa23.1■■□□□ 1.29
PDZRN3-202ENST00000308537 LRIT3Q3SXY7 679 aa23.1■■□□□ 1.29
PDZRN3-202ENST00000308537 DUSP28Q4G0W2 176 aa23.1■■□□□ 1.29
PDZRN3-202ENST00000308537 GNASQ5JWF2 1037 aa23.1■■□□□ 1.29
PDZRN3-202ENST00000308537 CREB3L3Q68CJ9 461 aa23.1■■□□□ 1.29
PDZRN3-202ENST00000308537 FBXO11Q86XK2 927 aa23.1■■□□□ 1.29
PDZRN3-202ENST00000308537 NUP133Q8WUM0 1156 aa23.1■■□□□ 1.29
PDZRN3-202ENST00000308537 GRIN2DO15399 1336 aa23.09■■□□□ 1.29
PDZRN3-202ENST00000308537 ZBTB5O15062 677 aa23.09■■□□□ 1.29
PDZRN3-202ENST00000308537 KIAA0355O15063 1070 aa23.09■■□□□ 1.29
PDZRN3-202ENST00000308537 TMEM67Q5HYA8 995 aa23.09■■□□□ 1.29
PDZRN3-202ENST00000308537 KIAA1211Q6ZU35 1233 aa23.09■■□□□ 1.29
PDZRN3-202ENST00000308537 SLC43A3Q8NBI5 491 aa23.09■■□□□ 1.29
PDZRN3-202ENST00000308537 TAAR1Q96RJ0 339 aa23.09■■□□□ 1.29
PDZRN3-202ENST00000308537 MTA3Q9BTC8 594 aa23.09■■□□□ 1.29
PDZRN3-202ENST00000308537 SPC25Q9HBM1 224 aa23.09■■□□□ 1.29
PDZRN3-202ENST00000308537 SCN10AQ9Y5Y9 1956 aa23.09■■□□□ 1.29
PDZRN3-202ENST00000308537 DYNC1LI2O43237 492 aaPredicted RBP23.08■■□□□ 1.29
PDZRN3-202ENST00000308537 PQBP1O60828 265 aaKnown RBP23.08■■□□□ 1.29
PDZRN3-202ENST00000308537 CLTBP09497 229 aa23.08■■□□□ 1.29
PDZRN3-202ENST00000308537 FSCN1Q16658 493 aaKnown RBP23.08■■□□□ 1.29
PDZRN3-202ENST00000308537 BADQ92934 168 aa23.08■■□□□ 1.29
PDZRN3-202ENST00000308537 GLT1D1Q96MS3 346 aa23.08■■□□□ 1.29
PDZRN3-202ENST00000308537 AMNQ9BXJ7 453 aa23.08■■□□□ 1.29
PDZRN3-202ENST00000308537 PRDM5Q9NQX1 630 aaPredicted RBP23.08■■□□□ 1.29
PDZRN3-202ENST00000308537 TBX21Q9UL17 535 aa23.08■■□□□ 1.29
PDZRN3-202ENST00000308537 SH2B2O14492 632 aaPredicted RBP23.07■■□□□ 1.28
PDZRN3-202ENST00000308537 ARIH2O95376 493 aa23.07■■□□□ 1.28
PDZRN3-202ENST00000308537 HSD17B4P51659 736 aa23.07■■□□□ 1.28
PDZRN3-202ENST00000308537 CXCL17Q6UXB2 119 aa23.07■■□□□ 1.28
PDZRN3-202ENST00000308537 PIGSQ96S52 555 aa23.07■■□□□ 1.28
PDZRN3-202ENST00000308537 WDR11Q9BZH6 1224 aa23.07■■□□□ 1.28
PDZRN3-202ENST00000308537 ANO2Q9NQ90 1003 aa23.07■■□□□ 1.28
PDZRN3-202ENST00000308537 MRPL11Q9Y3B7 192 aaKnown RBP23.07■■□□□ 1.28
PDZRN3-202ENST00000308537 ERICH2A1L162 156 aa23.06■■□□□ 1.28
PDZRN3-202ENST00000308537 ARVCFO00192 962 aa23.06■■□□□ 1.28
PDZRN3-202ENST00000308537 PRC1O43663 620 aa23.06■■□□□ 1.28
PDZRN3-202ENST00000308537 DHX16O60231 1041 aaKnown RBP23.06■■□□□ 1.28
PDZRN3-202ENST00000308537 FAM126BQ8IXS8 530 aa23.06■■□□□ 1.28
PDZRN3-202ENST00000308537 ZNF654Q8IZM8 581 aa23.06■■□□□ 1.28
PDZRN3-202ENST00000308537 MAP3K14Q99558 947 aa23.06■■□□□ 1.28
PDZRN3-202ENST00000308537 MYL10Q9BUA6 226 aa23.06■■□□□ 1.28
PDZRN3-202ENST00000308537 A0A0U1RQG5 324 aaPredicted RBP23.05■■□□□ 1.28
PDZRN3-202ENST00000308537 PDE4DQ08499 809 aa23.05■■□□□ 1.28
PDZRN3-202ENST00000308537 SART3Q15020 963 aaKnown RBP23.05■■□□□ 1.28
PDZRN3-202ENST00000308537 CCDC62Q6P9F0 684 aa23.05■■□□□ 1.28
PDZRN3-202ENST00000308537 NOL8Q76FK4 1167 aaKnown RBP23.05■■□□□ 1.28
PDZRN3-202ENST00000308537 MCF2L2Q86YR7 1114 aa23.05■■□□□ 1.28
PDZRN3-202ENST00000308537 LBHD1Q9BQE6 289 aaPredicted RBP23.05■■□□□ 1.28
PDZRN3-202ENST00000308537 PRKAG2Q9UGJ0 569 aa23.05■■□□□ 1.28
PDZRN3-202ENST00000308537 CD4P01730 458 aa23.04■■□□□ 1.28
PDZRN3-202ENST00000308537 MCM5P33992 734 aa23.04■■□□□ 1.28
PDZRN3-202ENST00000308537 EPHB4P54760 987 aa23.04■■□□□ 1.28
PDZRN3-202ENST00000308537 C9orf50Q5SZB4 431 aa23.04■■□□□ 1.28
PDZRN3-202ENST00000308537 RASEFQ8IZ41 740 aa23.04■■□□□ 1.28
PDZRN3-202ENST00000308537 COPS5Q92905 334 aa23.04■■□□□ 1.28
PDZRN3-202ENST00000308537 AP5M1Q9H0R1 490 aa23.04■■□□□ 1.28
PDZRN3-202ENST00000308537 CDC45O75419 566 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms