RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 ANO3Q9BYT9 981 aa21.38■■□□□ 1.01
VBP1-201ENST00000286428 EHMT1Q9H9B1 1298 aa21.38■■□□□ 1.01
VBP1-201ENST00000286428 MRPL11Q9Y3B7 192 aaKnown RBP21.38■■□□□ 1.01
VBP1-201ENST00000286428 SHTN1A0MZ66 631 aa21.37■■□□□ 1.01
VBP1-201ENST00000286428 USP14P54578 494 aa21.37■■□□□ 1.01
VBP1-201ENST00000286428 KARSQ15046 597 aaKnown RBP21.37■■□□□ 1.01
VBP1-201ENST00000286428 POTEDQ86YR6 584 aa21.37■■□□□ 1.01
VBP1-201ENST00000286428 SLFN12Q8IYM2 578 aa21.37■■□□□ 1.01
VBP1-201ENST00000286428 LRRC27Q9C0I9 530 aa21.37■■□□□ 1.01
VBP1-201ENST00000286428 RANBP17Q9H2T7 1088 aaKnown RBP21.37■■□□□ 1.01
VBP1-201ENST00000286428 LRWD1Q9UFC0 647 aa21.37■■□□□ 1.01
VBP1-201ENST00000286428 CYP3A7-CYP3A51PA0A087WV96 503 aa21.37■■□□□ 1.01
VBP1-201ENST00000286428 MEIS2O14770 477 aa21.37■■□□□ 1.01
VBP1-201ENST00000286428 WDR46O15213 610 aaKnown RBP21.37■■□□□ 1.01
VBP1-201ENST00000286428 CYP3A7P24462 503 aa21.37■■□□□ 1.01
VBP1-201ENST00000286428 NCAPHQ15003 741 aa21.37■■□□□ 1.01
VBP1-201ENST00000286428 GRAMD1CQ8IYS0 662 aa21.37■■□□□ 1.01
VBP1-201ENST00000286428 KIAA1683Q9H0B3 1180 aa21.37■■□□□ 1.01
VBP1-201ENST00000286428 AS3MTQ9HBK9 375 aa21.37■■□□□ 1.01
VBP1-201ENST00000286428 GPRC5DQ9NZD1 345 aa21.37■■□□□ 1.01
VBP1-201ENST00000286428 USP17L15C9J2P7 530 aa21.36■■□□□ 1.01
VBP1-201ENST00000286428 USP17L13C9JLJ4 530 aa21.36■■□□□ 1.01
VBP1-201ENST00000286428 USP17L11C9JVI0 530 aa21.36■■□□□ 1.01
VBP1-201ENST00000286428 USP17L18D6R9N7 530 aa21.36■■□□□ 1.01
VBP1-201ENST00000286428 USP17L22D6RA61 530 aa21.36■■□□□ 1.01
VBP1-201ENST00000286428 USP17L17D6RBQ6 530 aa21.36■■□□□ 1.01
VBP1-201ENST00000286428 USP17L19D6RCP7 530 aa21.36■■□□□ 1.01
VBP1-201ENST00000286428 USP17L20D6RJB6 530 aa21.36■■□□□ 1.01
VBP1-201ENST00000286428 HOXA7P31268 230 aaPredicted RBP21.36■■□□□ 1.01
VBP1-201ENST00000286428 USP17L24Q0WX57 530 aa21.36■■□□□ 1.01
VBP1-201ENST00000286428 USH1GQ495M9 461 aa21.36■■□□□ 1.01
VBP1-201ENST00000286428 KRT79Q5XKE5 535 aa21.36■■□□□ 1.01
VBP1-201ENST00000286428 USP17L6PQ6QN14 398 aa21.36■■□□□ 1.01
VBP1-201ENST00000286428 CDK5RAP3Q96JB5 506 aa21.36■■□□□ 1.01
VBP1-201ENST00000286428 STK17AQ9UEE5 414 aa21.36■■□□□ 1.01
VBP1-201ENST00000286428 TBX3O15119 743 aa21.35■■□□□ 1.01
VBP1-201ENST00000286428 TDP2O95551 362 aa21.35■■□□□ 1.01
VBP1-201ENST00000286428 CDAN1Q8IWY9 1227 aa21.35■■□□□ 1.01
VBP1-201ENST00000286428 KIFC2Q96AC6 838 aa21.35■■□□□ 1.01
VBP1-201ENST00000286428 ZNF541Q9H0D2 1346 aa21.35■■□□□ 1.01
VBP1-201ENST00000286428 KBTBD4Q9NVX7 518 aa21.35■■□□□ 1.01
VBP1-201ENST00000286428 PCDHA12Q9UN75 941 aa21.35■■□□□ 1.01
VBP1-201ENST00000286428 ABCB11O95342 1321 aa21.34■■□□□ 1.01
VBP1-201ENST00000286428 EGFRP00533 1210 aa21.34■■□□□ 1.01
VBP1-201ENST00000286428 FDX1P10109 184 aa21.34■■□□□ 1.01
VBP1-201ENST00000286428 BMP6P22004 513 aa21.34■■□□□ 1.01
VBP1-201ENST00000286428 CDC25AP30304 524 aa21.34■■□□□ 1.01
VBP1-201ENST00000286428 PRELPP51888 382 aa21.34■■□□□ 1.01
VBP1-201ENST00000286428 KCNB1Q14721 858 aa21.34■■□□□ 1.01
VBP1-201ENST00000286428 PRPF38AQ8NAV1 312 aaKnown RBP21.34■■□□□ 1.01
VBP1-201ENST00000286428 SPC24Q8NBT2 197 aa21.34■■□□□ 1.01
VBP1-201ENST00000286428 TTC12Q9H892 705 aaPredicted RBP21.34■■□□□ 1.01
VBP1-201ENST00000286428 IMPACTQ9P2X3 320 aa21.34■■□□□ 1.01
VBP1-201ENST00000286428 RPN1P04843 607 aaKnown RBP21.34■■□□□ 1.01
VBP1-201ENST00000286428 PPP1R2P41236 205 aa21.34■■□□□ 1.01
VBP1-201ENST00000286428 SUPT20HL1Q3ZLR7 823 aa21.34■■□□□ 1.01
VBP1-201ENST00000286428 ZNF658Q5TYW1 1059 aaPredicted RBP21.34■■□□□ 1.01
VBP1-201ENST00000286428 SAMD3Q8N6K7 520 aa21.34■■□□□ 1.01
VBP1-201ENST00000286428 MBOAT7Q96N66 472 aa21.34■■□□□ 1.01
VBP1-201ENST00000286428 RABGAP1Q9Y3P9 1069 aa21.34■■□□□ 1.01
VBP1-201ENST00000286428 GCOM1H8Y6P7 765 aaPredicted RBP21.33■■□□□ 1
VBP1-201ENST00000286428 SLC37A4O43826 429 aa21.33■■□□□ 1
VBP1-201ENST00000286428 ZNF500O60304 480 aaPredicted RBP21.33■■□□□ 1
VBP1-201ENST00000286428 POLR2MP0CAP2 368 aa21.33■■□□□ 1
VBP1-201ENST00000286428 SREBF1P36956 1147 aa21.33■■□□□ 1
VBP1-201ENST00000286428 ARHGAP4P98171 946 aa21.33■■□□□ 1
VBP1-201ENST00000286428 ANGEL2Q5VTE6 544 aaKnown RBP21.33■■□□□ 1
VBP1-201ENST00000286428 NT5C3AQ9H0P0 336 aa21.33■■□□□ 1
VBP1-201ENST00000286428 PICK1Q9NRD5 415 aa21.33■■□□□ 1
VBP1-201ENST00000286428 KDM3AQ9Y4C1 1321 aa21.32■■□□□ 1
VBP1-201ENST00000286428 SERPINC1P01008 464 aa21.32■■□□□ 1
VBP1-201ENST00000286428 LMOD1P29536 600 aaPredicted RBP21.32■■□□□ 1
VBP1-201ENST00000286428 GSDMDP57764 484 aa21.32■■□□□ 1
VBP1-201ENST00000286428 STIM1Q13586 685 aa21.32■■□□□ 1
VBP1-201ENST00000286428 ZYXQ15942 572 aaKnown RBP21.32■■□□□ 1
VBP1-201ENST00000286428 Q4G0T1 1027 aa21.32■■□□□ 1
VBP1-201ENST00000286428 RRAGDQ9NQL2 400 aaPredicted RBP21.32■■□□□ 1
VBP1-201ENST00000286428 ZNF112Q9UJU3 913 aa21.32■■□□□ 1
VBP1-201ENST00000286428 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.32■■□□□ 11e-8■■□□□ 12.4
VBP1-201ENST00000286428 PITPNM2Q9BZ72 1349 aa21.31■■□□□ 1
VBP1-201ENST00000286428 CYP3A4P08684 503 aa21.31■■□□□ 1
VBP1-201ENST00000286428 PLCG1P19174 1290 aa21.31■■□□□ 1
VBP1-201ENST00000286428 CDK11BP21127 795 aaKnown RBP21.31■■□□□ 1
VBP1-201ENST00000286428 CIITAP33076 1130 aa21.31■■□□□ 1
VBP1-201ENST00000286428 FANCCQ00597 558 aa21.31■■□□□ 1
VBP1-201ENST00000286428 CUL4BQ13620 913 aa21.31■■□□□ 1
VBP1-201ENST00000286428 NAALADL2Q58DX5 795 aa21.31■■□□□ 1
VBP1-201ENST00000286428 KIAA1755Q5JYT7 1200 aa21.31■■□□□ 1
VBP1-201ENST00000286428 SV2BQ7L1I2 683 aa21.31■■□□□ 1
VBP1-201ENST00000286428 SCYL3Q8IZE3 742 aa21.31■■□□□ 1
VBP1-201ENST00000286428 FAM20AQ96MK3 541 aa21.31■■□□□ 1
VBP1-201ENST00000286428 WDR18Q9BV38 432 aa21.31■■□□□ 1
VBP1-201ENST00000286428 PP2D1A8MPX8 630 aa21.31■■□□□ 1
VBP1-201ENST00000286428 EDIL3O43854 480 aa21.31■■□□□ 1
VBP1-201ENST00000286428 SNAP25P60880 206 aa21.31■■□□□ 1
VBP1-201ENST00000286428 NBPF12Q5TAG4 269 aaPredicted RBP21.31■■□□□ 1
VBP1-201ENST00000286428 SPATA1Q5VX52 437 aa21.31■■□□□ 1
VBP1-201ENST00000286428 MCF2L2Q86YR7 1114 aa21.31■■□□□ 1
VBP1-201ENST00000286428 CRYGNQ8WXF5 182 aa21.31■■□□□ 1
VBP1-201ENST00000286428 C7orf25Q9BPX7 421 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms