RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 UBE3CQ15386 1083 aa5.82□□□□□ -1.48
SYCP1-209ENST00000613524 FAM83BQ5T0W9 1011 aa5.82□□□□□ -1.48
SYCP1-209ENST00000613524 OTUD7BQ6GQQ9 843 aa5.82□□□□□ -1.48
SYCP1-209ENST00000613524 UIMC1Q96RL1 719 aa5.82□□□□□ -1.48
SYCP1-209ENST00000613524 TRPM7Q96QT4 1865 aa5.81□□□□□ -1.48
SYCP1-209ENST00000613524 ZNF213O14771 459 aa5.81□□□□□ -1.48
SYCP1-209ENST00000613524 CETPP11597 493 aa5.81□□□□□ -1.48
SYCP1-209ENST00000613524 CNGA1P29973 690 aa5.81□□□□□ -1.48
SYCP1-209ENST00000613524 LRRFIP1Q32MZ4 808 aaKnown RBP5.81□□□□□ -1.48
SYCP1-209ENST00000613524 KIAA1755Q5JYT7 1200 aa5.81□□□□□ -1.48
SYCP1-209ENST00000613524 ZMYM1Q5SVZ6 1142 aa5.81□□□□□ -1.48
SYCP1-209ENST00000613524 POTEEQ6S8J3 1075 aa5.81□□□□□ -1.48
SYCP1-209ENST00000613524 NCAPG2Q86XI2 1143 aa5.81□□□□□ -1.48
SYCP1-209ENST00000613524 HOMER1Q86YM7 354 aa5.81□□□□□ -1.48
SYCP1-209ENST00000613524 CEP95Q96GE4 821 aa5.81□□□□□ -1.48
SYCP1-209ENST00000613524 SPACA7Q96KW9 195 aa5.81□□□□□ -1.48
SYCP1-209ENST00000613524 P2RX7Q99572 595 aaKnown RBP5.81□□□□□ -1.48
SYCP1-209ENST00000613524 DHX36Q9H2U1 1008 aaKnown RBP5.81□□□□□ -1.48
SYCP1-209ENST00000613524 RPAP3Q9H6T3 665 aaPredicted RBP5.81□□□□□ -1.48
SYCP1-209ENST00000613524 CTNND1O60716 968 aaKnown RBP5.81□□□□□ -1.48
SYCP1-209ENST00000613524 MAP2K2P36507 400 aa5.81□□□□□ -1.48
SYCP1-209ENST00000613524 C12orf60Q5U649 245 aa5.81□□□□□ -1.48
SYCP1-209ENST00000613524 TAS1R3Q7RTX0 852 aa5.81□□□□□ -1.48
SYCP1-209ENST00000613524 TBC1D10CQ8IV04 446 aa5.81□□□□□ -1.48
SYCP1-209ENST00000613524 HOOK2Q96ED9 719 aa5.81□□□□□ -1.48
SYCP1-209ENST00000613524 FAM163AQ96GL9 167 aaPredicted RBP5.81□□□□□ -1.48
SYCP1-209ENST00000613524 UBA5Q9GZZ9 404 aa5.81□□□□□ -1.48
SYCP1-209ENST00000613524 EFCC1Q9HA90 598 aa5.81□□□□□ -1.48
SYCP1-209ENST00000613524 PPP2R3BQ9Y5P8 575 aa5.81□□□□□ -1.48
SYCP1-209ENST00000613524 CCDC171Q6TFL3 1326 aa5.81□□□□□ -1.48
SYCP1-209ENST00000613524 MANSC4A6NHS7 340 aaPredicted RBP5.8□□□□□ -1.48
SYCP1-209ENST00000613524 TNPO2O14787 897 aaKnown RBP5.8□□□□□ -1.48
SYCP1-209ENST00000613524 PPP4CP60510 307 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 PDE4BQ07343 736 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 USH1GQ495M9 461 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 IER5LQ5T953 404 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 MFSD6Q6ZSS7 791 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 EEPD1Q7L9B9 569 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 RETREG3Q86VR2 466 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 PPP1R13LQ8WUF5 828 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 MCOLN1Q9GZU1 580 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 ASCC2Q9H1I8 757 aaPredicted RBP5.8□□□□□ -1.48
SYCP1-209ENST00000613524 ZFYVE28Q9HCC9 887 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 ATP8A2Q9NTI2 1148 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 VTI1BQ9UEU0 232 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 G3BP2Q9UN86 482 aaKnown RBP5.8□□□□□ -1.48
SYCP1-209ENST00000613524 NEDD4P46934 1319 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 ZFYP08048 801 aaPredicted RBP5.8□□□□□ -1.48
SYCP1-209ENST00000613524 PTPREP23469 700 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 CHMLP26374 656 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 FKBP1BP68106 108 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 SP3Q02447 781 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 TTBK2Q6IQ55 1244 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 NFXL1Q6ZNB6 911 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 PACS2Q86VP3 889 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 FOXP4Q8IVH2 680 aaPredicted RBP5.8□□□□□ -1.48
SYCP1-209ENST00000613524 RAET1EQ8TD07 263 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 ATG4CQ96DT6 458 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 ZNF512BQ96KM6 892 aaPredicted RBP5.8□□□□□ -1.48
SYCP1-209ENST00000613524 TACC3Q9Y6A5 838 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 COL6A3P12111 3177 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 SCAMP3O14828 347 aaKnown RBP5.8□□□□□ -1.48
SYCP1-209ENST00000613524 PARNO95453 639 aaKnown RBP5.8□□□□□ -1.48
SYCP1-209ENST00000613524 F12P00748 615 aaPredicted RBP5.8□□□□□ -1.48
SYCP1-209ENST00000613524 SLC3A2P08195 630 aaKnown RBP5.8□□□□□ -1.48
SYCP1-209ENST00000613524 VCAM1P19320 739 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 BACE1P56817 501 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 PPATQ06203 517 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 LYPD8Q6UX82 237 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 RALYLQ86SE5 291 aaKnown RBP5.8□□□□□ -1.48
SYCP1-209ENST00000613524 UPF3BQ9BZI7 483 aaKnown RBP5.8□□□□□ -1.48
SYCP1-209ENST00000613524 PORCNQ9H237 461 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 SENP2Q9HC62 589 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 TXNRD2Q9NNW7 524 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 GABBR1Q9UBS5 961 aa5.8□□□□□ -1.48
SYCP1-209ENST00000613524 HERC5Q9UII4 1024 aaKnown RBP5.8□□□□□ -1.48
SYCP1-209ENST00000613524 CDK5RAP2Q96SN8 1893 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 TMEM232C9JQI7 657 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 TNRC18O15417 2968 aaPredicted RBP5.79□□□□□ -1.48
SYCP1-209ENST00000613524 PGK2P07205 417 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 PTGS1P23219 599 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 USP46P62068 366 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 PRKCZQ05513 592 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 TRDNQ13061 729 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 STK3Q13188 491 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 CBLBQ13191 982 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 PPIL2Q13356 520 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 KIF22Q14807 665 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 Q3C1V9 767 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 MORN1Q5T089 497 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 MEI1Q5TIA1 1274 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 TRMT1LQ7Z2T5 733 aaKnown RBP5.79□□□□□ -1.48
SYCP1-209ENST00000613524 TBC1D32Q96NH3 1257 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 UBAC1Q9BSL1 405 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 ARHGEF10LQ9HCE6 1279 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 ARPP21Q9UBL0 812 aaPredicted RBP5.79□□□□□ -1.48
SYCP1-209ENST00000613524 GABRQQ9UN88 632 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 AFG3L2Q9Y4W6 797 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 RBM8AQ9Y5S9 174 aaKnown RBP5.79□□□□□ -1.48
SYCP1-209ENST00000613524 MYH1P12882 1939 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms