RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 SLC16A2P36021 539 aa18.56■□□□□ 0.56
CSNK1D-223ENST00000584472 ME3Q16798 604 aa18.56■□□□□ 0.56
CSNK1D-223ENST00000584472 FANCBQ8NB91 859 aa18.56■□□□□ 0.56
CSNK1D-223ENST00000584472 CHST13Q8NET6 341 aa18.56■□□□□ 0.56
CSNK1D-223ENST00000584472 SNX21Q969T3 373 aa18.56■□□□□ 0.56
CSNK1D-223ENST00000584472 TSHZ2Q9NRE2 1034 aa18.56■□□□□ 0.56
CSNK1D-223ENST00000584472 FBXO40Q9UH90 709 aa18.56■□□□□ 0.56
CSNK1D-223ENST00000584472 PNMA2Q9UL42 364 aa18.56■□□□□ 0.56
CSNK1D-223ENST00000584472 PALM3A6NDB9 673 aaPredicted RBP18.55■□□□□ 0.56
CSNK1D-223ENST00000584472 GOLGA8AA7E2F4 631 aa18.55■□□□□ 0.56
CSNK1D-223ENST00000584472 ICAM1P05362 532 aa18.55■□□□□ 0.56
CSNK1D-223ENST00000584472 GOLGA8HP0CJ92 632 aa18.55■□□□□ 0.56
CSNK1D-223ENST00000584472 CYP2B6P20813 491 aa18.55■□□□□ 0.56
CSNK1D-223ENST00000584472 METAP2P50579 478 aaKnown RBP eCLIP18.55■□□□□ 0.568e-7■□□□□ 9.4
CSNK1D-223ENST00000584472 KCTD2Q14681 263 aa18.55■□□□□ 0.56
CSNK1D-223ENST00000584472 TKFCQ3LXA3 575 aa18.55■□□□□ 0.56
CSNK1D-223ENST00000584472 CCDC144CPQ8IYA2 1237 aa18.55■□□□□ 0.56
CSNK1D-223ENST00000584472 CTCFLQ8NI51 663 aaPredicted RBP18.55■□□□□ 0.56
CSNK1D-223ENST00000584472 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.55■□□□□ 0.562e-11■■■■■ 46.5
CSNK1D-223ENST00000584472 HMX1Q9NP08 348 aaPredicted RBP18.55■□□□□ 0.56
CSNK1D-223ENST00000584472 SLC5A4Q9NY91 659 aa18.55■□□□□ 0.56
CSNK1D-223ENST00000584472 MAD2L2Q9UI95 211 aa18.55■□□□□ 0.56
CSNK1D-223ENST00000584472 RIPK3Q9Y572 518 aa18.55■□□□□ 0.56
CSNK1D-223ENST00000584472 PFKFB2O60825 505 aa18.54■□□□□ 0.56
CSNK1D-223ENST00000584472 FARP2O94887 1054 aaPredicted RBP18.54■□□□□ 0.56
CSNK1D-223ENST00000584472 KIF5BP33176 963 aa18.54■□□□□ 0.56
CSNK1D-223ENST00000584472 STK3Q13188 491 aa18.54■□□□□ 0.56
CSNK1D-223ENST00000584472 PPP2R5BQ15173 497 aa18.54■□□□□ 0.56
CSNK1D-223ENST00000584472 RTN1Q16799 776 aa18.54■□□□□ 0.56
CSNK1D-223ENST00000584472 DPP9Q86TI2 863 aa18.54■□□□□ 0.56
CSNK1D-223ENST00000584472 STAG2Q8N3U4 1231 aa18.54■□□□□ 0.56
CSNK1D-223ENST00000584472 TRIB2Q92519 343 aa18.54■□□□□ 0.56
CSNK1D-223ENST00000584472 ZSCAN31Q96LW9 406 aaPredicted RBP18.54■□□□□ 0.56
CSNK1D-223ENST00000584472 MMP19Q99542 508 aa18.54■□□□□ 0.56
CSNK1D-223ENST00000584472 FAM217BQ9NTX9 383 aaPredicted RBP18.54■□□□□ 0.56
CSNK1D-223ENST00000584472 ZNFX1Q9P2E3 1918 aaKnown RBP18.54■□□□□ 0.56
CSNK1D-223ENST00000584472 CDC27P30260 824 aa18.53■□□□□ 0.56
CSNK1D-223ENST00000584472 CCT2P78371 535 aaKnown RBP18.53■□□□□ 0.56
CSNK1D-223ENST00000584472 SCRN1Q12765 414 aa18.53■□□□□ 0.56
CSNK1D-223ENST00000584472 CCDC174Q6PII3 467 aa18.53■□□□□ 0.56
CSNK1D-223ENST00000584472 AGBL1Q96MI9 1066 aa18.53■□□□□ 0.56
CSNK1D-223ENST00000584472 DEFB118Q96PH6 123 aa18.53■□□□□ 0.56
CSNK1D-223ENST00000584472 SLKQ9H2G2 1235 aaPredicted RBP18.53■□□□□ 0.56
CSNK1D-223ENST00000584472 SH2B1Q9NRF2 756 aaPredicted RBP18.53■□□□□ 0.56
CSNK1D-223ENST00000584472 RBM28Q9NW13 759 aaKnown RBP18.53■□□□□ 0.56
CSNK1D-223ENST00000584472 CCPG1Q9ULG6 757 aa18.53■□□□□ 0.56
CSNK1D-223ENST00000584472 CEP290O15078 2479 aa18.52■□□□□ 0.56
CSNK1D-223ENST00000584472 KLRF2D3W0D1 207 aa18.52■□□□□ 0.56
CSNK1D-223ENST00000584472 ADD1P35611 737 aaKnown RBP18.52■□□□□ 0.56
CSNK1D-223ENST00000584472 SNAP25P60880 206 aa18.52■□□□□ 0.56
CSNK1D-223ENST00000584472 OLFML2BQ68BL8 750 aa18.52■□□□□ 0.56
CSNK1D-223ENST00000584472 ADGRF4Q8IZF3 695 aa18.52■□□□□ 0.56
CSNK1D-223ENST00000584472 NECAB1Q8N987 351 aa18.52■□□□□ 0.56
CSNK1D-223ENST00000584472 GTF3C6Q969F1 213 aa18.52■□□□□ 0.56
CSNK1D-223ENST00000584472 TMX3Q96JJ7 454 aa18.52■□□□□ 0.56
CSNK1D-223ENST00000584472 UBA5Q9GZZ9 404 aa18.52■□□□□ 0.56
CSNK1D-223ENST00000584472 ACAD9Q9H845 621 aa18.52■□□□□ 0.56
CSNK1D-223ENST00000584472 NCOA5Q9HCD5 579 aaKnown RBP18.52■□□□□ 0.56
CSNK1D-223ENST00000584472 RNF146Q9NTX7 359 aa18.52■□□□□ 0.56
CSNK1D-223ENST00000584472 DIS3Q9Y2L1 958 aaKnown RBP18.52■□□□□ 0.56
CSNK1D-223ENST00000584472 PLXNA1Q9UIW2 1896 aa18.52■□□□□ 0.55
CSNK1D-223ENST00000584472 MYH6P13533 1939 aa18.51■□□□□ 0.55
CSNK1D-223ENST00000584472 CCDC196A0A1B0GTZ2 297 aa18.51■□□□□ 0.55
CSNK1D-223ENST00000584472 COBLO75128 1261 aa18.51■□□□□ 0.55
CSNK1D-223ENST00000584472 IGHA2P01877 340 aa18.51■□□□□ 0.55
CSNK1D-223ENST00000584472 SLC4A3P48751 1232 aa18.51■□□□□ 0.55
CSNK1D-223ENST00000584472 GNAQP50148 359 aa18.51■□□□□ 0.55
CSNK1D-223ENST00000584472 ST3GAL1Q11201 340 aa18.51■□□□□ 0.55
CSNK1D-223ENST00000584472 CCL14Q16627 93 aa18.51■□□□□ 0.55
CSNK1D-223ENST00000584472 TMTC3Q6ZXV5 915 aa18.51■□□□□ 0.55
CSNK1D-223ENST00000584472 NPLOC4Q8TAT6 608 aa18.51■□□□□ 0.55
CSNK1D-223ENST00000584472 HOMER2Q9NSB8 354 aa18.51■□□□□ 0.55
CSNK1D-223ENST00000584472 BAZ2BQ9UIF8 2168 aaKnown RBP18.51■□□□□ 0.55
CSNK1D-223ENST00000584472 PFASO15067 1338 aa18.5■□□□□ 0.55
CSNK1D-223ENST00000584472 DNAJC25-GNG10A0A024R161 153 aa18.5■□□□□ 0.55
CSNK1D-223ENST00000584472 K7ELQ4 463 aaPredicted RBP18.5■□□□□ 0.55
CSNK1D-223ENST00000584472 PLEKHA8P1O95397 391 aa18.5■□□□□ 0.55
CSNK1D-223ENST00000584472 TFRCP02786 760 aaKnown RBP18.5■□□□□ 0.55
CSNK1D-223ENST00000584472 ALAS1P13196 640 aa18.5■□□□□ 0.55
CSNK1D-223ENST00000584472 MFSD14CQ5VZR4 134 aa18.5■□□□□ 0.55
CSNK1D-223ENST00000584472 HSCBQ8IWL3 235 aa18.5■□□□□ 0.55
CSNK1D-223ENST00000584472 ANKRD35Q8N283 1001 aa18.5■□□□□ 0.55
CSNK1D-223ENST00000584472 SRBD1Q8N5C6 995 aaKnown RBP18.5■□□□□ 0.55
CSNK1D-223ENST00000584472 DDX11Q96FC9 970 aa18.5■□□□□ 0.55
CSNK1D-223ENST00000584472 TRERF1Q96PN7 1200 aa18.5■□□□□ 0.55
CSNK1D-223ENST00000584472 LZTS2Q9BRK4 669 aa18.5■□□□□ 0.55
CSNK1D-223ENST00000584472 CPVLQ9H3G5 476 aa18.5■□□□□ 0.55
CSNK1D-223ENST00000584472 OGDHLQ9ULD0 1010 aa18.5■□□□□ 0.55
CSNK1D-223ENST00000584472 DHX16O60231 1041 aaKnown RBP18.49■□□□□ 0.55
CSNK1D-223ENST00000584472 PGK2P07205 417 aa18.49■□□□□ 0.55
CSNK1D-223ENST00000584472 PRKAR2AP13861 404 aaKnown RBP18.49■□□□□ 0.55
CSNK1D-223ENST00000584472 SMARCA1P28370 1054 aa18.49■□□□□ 0.55
CSNK1D-223ENST00000584472 NTRK3Q16288 839 aa18.49■□□□□ 0.55
CSNK1D-223ENST00000584472 CDC37Q16543 378 aaPredicted RBP18.49■□□□□ 0.55
CSNK1D-223ENST00000584472 SLC35G1Q2M3R5 365 aa18.49■□□□□ 0.55
CSNK1D-223ENST00000584472 ZNF792Q3KQV3 632 aa18.49■□□□□ 0.55
CSNK1D-223ENST00000584472 CMTR1Q8N1G2 835 aaKnown RBP18.49■□□□□ 0.55
CSNK1D-223ENST00000584472 MTMR8Q96EF0 704 aa18.49■□□□□ 0.55
CSNK1D-223ENST00000584472 MAML3Q96JK9 1138 aa18.49■□□□□ 0.55
CSNK1D-223ENST00000584472 JMJD4Q9H9V9 463 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms