RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 QRICH1Q2TAL8 776 aa13.25□□□□□ -0.29
RORA-207ENST00000558234 PPP1R18Q6NYC8 613 aa13.25□□□□□ -0.29
RORA-207ENST00000558234 ZNF713Q8N859 430 aaPredicted RBP13.25□□□□□ -0.29
RORA-207ENST00000558234 PHKBQ93100 1093 aa13.25□□□□□ -0.29
RORA-207ENST00000558234 PHF20Q9BVI0 1012 aa13.25□□□□□ -0.29
RORA-207ENST00000558234 RPTORQ8N122 1335 aa13.25□□□□□ -0.29
RORA-207ENST00000558234 PIK3CDO00329 1044 aa13.25□□□□□ -0.29
RORA-207ENST00000558234 OSBPP22059 807 aa13.25□□□□□ -0.29
RORA-207ENST00000558234 CDC37Q16543 378 aaPredicted RBP13.25□□□□□ -0.29
RORA-207ENST00000558234 MORN1Q5T089 497 aa13.25□□□□□ -0.29
RORA-207ENST00000558234 RAB11FIP4Q86YS3 637 aa13.25□□□□□ -0.29
RORA-207ENST00000558234 DAGLBQ8NCG7 672 aa13.25□□□□□ -0.29
RORA-207ENST00000558234 DDX11Q96FC9 970 aa13.25□□□□□ -0.29
RORA-207ENST00000558234 UBA5Q9GZZ9 404 aa13.25□□□□□ -0.29
RORA-207ENST00000558234 SH3GLB2Q9NR46 395 aa13.25□□□□□ -0.29
RORA-207ENST00000558234 MCM3APO60318 1980 aa13.25□□□□□ -0.29
RORA-207ENST00000558234 ERVK-9P63128 1117 aa13.25□□□□□ -0.29
RORA-207ENST00000558234 ERVK-24P63145 666 aa13.25□□□□□ -0.29
RORA-207ENST00000558234 WWC2Q6AWC2 1192 aa13.25□□□□□ -0.29
RORA-207ENST00000558234 GPCPD1Q9NPB8 672 aa13.25□□□□□ -0.29
RORA-207ENST00000558234 ATL3Q6DD88 541 aa13.24□□□□□ -0.29
RORA-207ENST00000558234 CMTR1Q8N1G2 835 aaKnown RBP13.24□□□□□ -0.29
RORA-207ENST00000558234 PIGSQ96S52 555 aa13.24□□□□□ -0.29
RORA-207ENST00000558234 BARHL2Q9NY43 387 aa13.24□□□□□ -0.29
RORA-207ENST00000558234 RCOR1Q9UKL0 485 aa13.24□□□□□ -0.29
RORA-207ENST00000558234 TKFCQ3LXA3 575 aa13.24□□□□□ -0.29
RORA-207ENST00000558234 CTCFLQ8NI51 663 aaPredicted RBP13.24□□□□□ -0.29
RORA-207ENST00000558234 MORC4Q8TE76 937 aa13.24□□□□□ -0.29
RORA-207ENST00000558234 SPATC1LQ9H0A9 340 aa13.24□□□□□ -0.29
RORA-207ENST00000558234 BRCA2P51587 3418 aa13.24□□□□□ -0.29
RORA-207ENST00000558234 FLOT1O75955 427 aa13.24□□□□□ -0.29
RORA-207ENST00000558234 NASPP49321 788 aaPredicted RBP13.24□□□□□ -0.29
RORA-207ENST00000558234 SAMD3Q8N6K7 520 aa13.24□□□□□ -0.29
RORA-207ENST00000558234 PGBD1Q96JS3 809 aa13.24□□□□□ -0.29
RORA-207ENST00000558234 GJD2Q9UKL4 321 aa13.24□□□□□ -0.29
RORA-207ENST00000558234 MMP1P03956 469 aa13.23□□□□□ -0.29
RORA-207ENST00000558234 ABRAQ8N0Z2 381 aa13.23□□□□□ -0.29
RORA-207ENST00000558234 MOV10L1Q9BXT6 1211 aaKnown RBP13.23□□□□□ -0.29
RORA-207ENST00000558234 ORC3Q9UBD5 711 aaPredicted RBP13.23□□□□□ -0.29
RORA-207ENST00000558234 CENPFP49454 3210 aa13.23□□□□□ -0.29
RORA-207ENST00000558234 CCDC196A0A1B0GTZ2 297 aa13.23□□□□□ -0.29
RORA-207ENST00000558234 ATP2B2Q01814 1243 aa13.23□□□□□ -0.29
RORA-207ENST00000558234 GRB14Q14449 540 aa13.23□□□□□ -0.29
RORA-207ENST00000558234 SKOR2Q2VWA4 1001 aaPredicted RBP13.23□□□□□ -0.29
RORA-207ENST00000558234 FAM173BQ6P4H8 233 aa13.23□□□□□ -0.29
RORA-207ENST00000558234 NFXL1Q6ZNB6 911 aa13.23□□□□□ -0.29
RORA-207ENST00000558234 CCDC144CPQ8IYA2 1237 aa13.23□□□□□ -0.29
RORA-207ENST00000558234 TANGO6Q9C0B7 1094 aa13.23□□□□□ -0.29
RORA-207ENST00000558234 CDKL5O76039 1030 aa13.23□□□□□ -0.29
RORA-207ENST00000558234 TAL1P17542 331 aaPredicted RBP13.23□□□□□ -0.29
RORA-207ENST00000558234 PTPAQ15257 358 aa13.23□□□□□ -0.29
RORA-207ENST00000558234 AGBL1Q96MI9 1066 aa13.23□□□□□ -0.29
RORA-207ENST00000558234 ZMYND12Q9H0C1 365 aa13.23□□□□□ -0.29
RORA-207ENST00000558234 DOCK5Q9H7D0 1870 aa13.23□□□□□ -0.29
RORA-207ENST00000558234 ABCB11O95342 1321 aa13.23□□□□□ -0.29
RORA-207ENST00000558234 TOB1P50616 345 aaPredicted RBP13.22□□□□□ -0.29
RORA-207ENST00000558234 MUM1L1Q5H9M0 696 aa13.22□□□□□ -0.29
RORA-207ENST00000558234 MEIS2O14770 477 aa13.22□□□□□ -0.29
RORA-207ENST00000558234 DEXIO95424 95 aa13.22□□□□□ -0.29
RORA-207ENST00000558234 PORCNQ9H237 461 aa13.22□□□□□ -0.29
RORA-207ENST00000558234 RTEL1Q9NZ71 1219 aa13.22□□□□□ -0.29
RORA-207ENST00000558234 TMEM63CQ9P1W3 806 aa13.22□□□□□ -0.29
RORA-207ENST00000558234 FAM237AA0A1B0GTK4 181 aa13.22□□□□□ -0.29
RORA-207ENST00000558234 ZNF445P59923 1031 aa13.22□□□□□ -0.29
RORA-207ENST00000558234 RBM43Q6ZSC3 357 aaKnown RBP13.22□□□□□ -0.29
RORA-207ENST00000558234 LEO1Q8WVC0 666 aaPredicted RBP13.22□□□□□ -0.29
RORA-207ENST00000558234 PNMA2Q9UL42 364 aa13.22□□□□□ -0.29
RORA-207ENST00000558234 SCG2P13521 617 aa13.21□□□□□ -0.29
RORA-207ENST00000558234 MAP2K1Q02750 393 aaPredicted RBP13.21□□□□□ -0.29
RORA-207ENST00000558234 KRT40Q6A162 431 aa13.21□□□□□ -0.29
RORA-207ENST00000558234 NUP133Q8WUM0 1156 aa13.21□□□□□ -0.29
RORA-207ENST00000558234 TEX13BQ9BXU2 312 aa13.21□□□□□ -0.29
RORA-207ENST00000558234 POLR3EQ9NVU0 708 aa13.21□□□□□ -0.29
RORA-207ENST00000558234 RBM27Q9P2N5 1060 aaKnown RBP13.21□□□□□ -0.29
RORA-207ENST00000558234 PRPF40AO75400 957 aaKnown RBP13.21□□□□□ -0.29
RORA-207ENST00000558234 SNAP25P60880 206 aa13.21□□□□□ -0.29
RORA-207ENST00000558234 KIFC2Q96AC6 838 aa13.21□□□□□ -0.29
RORA-207ENST00000558234 FUCA2Q9BTY2 467 aa13.21□□□□□ -0.29
RORA-207ENST00000558234 MAP3K20Q9NYL2 800 aaKnown RBP13.21□□□□□ -0.29
RORA-207ENST00000558234 HOXC6P09630 235 aa13.21□□□□□ -0.3
RORA-207ENST00000558234 COPB2P35606 906 aa13.21□□□□□ -0.3
RORA-207ENST00000558234 CCDC96Q2M329 555 aa13.21□□□□□ -0.3
RORA-207ENST00000558234 OTUD7BQ6GQQ9 843 aa13.21□□□□□ -0.3
RORA-207ENST00000558234 ZFYVE28Q9HCC9 887 aa13.21□□□□□ -0.3
RORA-207ENST00000558234 SLC25A27O95847 323 aa13.2□□□□□ -0.3
RORA-207ENST00000558234 EDNRBP24530 442 aa13.2□□□□□ -0.3
RORA-207ENST00000558234 LACTBP83111 547 aaPredicted RBP13.2□□□□□ -0.3
RORA-207ENST00000558234 BRAPQ7Z569 592 aa13.2□□□□□ -0.3
RORA-207ENST00000558234 CHST13Q8NET6 341 aa13.2□□□□□ -0.3
RORA-207ENST00000558234 KATNBL1Q9H079 304 aa13.2□□□□□ -0.3
RORA-207ENST00000558234 FOXP1Q9H334 677 aaPredicted RBP13.2□□□□□ -0.3
RORA-207ENST00000558234 COL20A1Q9P218 1284 aa13.2□□□□□ -0.3
RORA-207ENST00000558234 ATP6V1DQ9Y5K8 247 aa13.2□□□□□ -0.3
RORA-207ENST00000558234 HSPA8P11142 646 aaKnown RBP13.2□□□□□ -0.3
RORA-207ENST00000558234 TAF1CQ15572 869 aaPredicted RBP13.2□□□□□ -0.3
RORA-207ENST00000558234 GPRC5AQ8NFJ5 357 aa13.2□□□□□ -0.3
RORA-207ENST00000558234 ALG1Q9BT22 464 aa13.2□□□□□ -0.3
RORA-207ENST00000558234 GDPD2Q9HCC8 539 aa13.2□□□□□ -0.3
RORA-207ENST00000558234 UBE2HP62256 183 aa13.2□□□□□ -0.3
RORA-207ENST00000558234 FGD1P98174 961 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms