RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 AGBL1Q96MI9 1066 aa7.79□□□□□ -1.16
SLIRP-203ENST00000554074 GLT1D1Q96MS3 346 aa7.79□□□□□ -1.16
SLIRP-203ENST00000554074 TMEM47Q9BQJ4 181 aa7.79□□□□□ -1.16
SLIRP-203ENST00000554074 SEZ6LQ9BYH1 1024 aa7.79□□□□□ -1.16
SLIRP-203ENST00000554074 MAF1Q9H063 256 aa7.79□□□□□ -1.16
SLIRP-203ENST00000554074 PRDM5Q9NQX1 630 aaPredicted RBP7.79□□□□□ -1.16
SLIRP-203ENST00000554074 STARD7Q9NQZ5 370 aa7.79□□□□□ -1.16
SLIRP-203ENST00000554074 HOMER2Q9NSB8 354 aa7.79□□□□□ -1.16
SLIRP-203ENST00000554074 MTMR10Q9NXD2 777 aa7.79□□□□□ -1.16
SLIRP-203ENST00000554074 CYP39A1Q9NYL5 469 aa7.79□□□□□ -1.16
SLIRP-203ENST00000554074 ISY1Q9ULR0 285 aaKnown RBP7.79□□□□□ -1.16
SLIRP-203ENST00000554074 STXBP5LQ9Y2K9 1186 aa7.79□□□□□ -1.16
SLIRP-203ENST00000554074 TRIP12Q14669 1992 aaPredicted RBP7.79□□□□□ -1.16
SLIRP-203ENST00000554074 SOWAHBA6NEL2 793 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 DCDC2CA8MYV0 355 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 CTAGE5O15320 804 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 ADCY6O43306 1168 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 IGHDP01880 384 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 C6orf222P0C671 652 aaPredicted RBP7.78□□□□□ -1.16
SLIRP-203ENST00000554074 PDHBP11177 359 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 ALAS1P13196 640 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 CDK7P50613 346 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 ZNF543Q08ER8 600 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 KCNA10Q16322 511 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 CCDC96Q2M329 555 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 CCDC178Q5BJE1 867 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 SYDE2Q5VT97 1194 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 CCDC174Q6PII3 467 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 SH3RF1Q7Z6J0 888 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 DGKHQ86XP1 1220 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 ESR2Q92731 530 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 BADQ92934 168 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 RILPL2Q969X0 211 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 TOMM22Q9NS69 142 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 CCPG1Q9ULG6 757 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 GNEQ9Y223 722 aaKnown RBP7.78□□□□□ -1.16
SLIRP-203ENST00000554074 Q9Y3F1 56 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 BAZ2BQ9UIF8 2168 aaKnown RBP7.78□□□□□ -1.16
SLIRP-203ENST00000554074 ASTN1O14525 1302 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 WDR19Q8NEZ3 1342 aa7.78□□□□□ -1.16
SLIRP-203ENST00000554074 A0A0U1RQG5 324 aaPredicted RBP7.77□□□□□ -1.17
SLIRP-203ENST00000554074 MYADML2A6NDP7 307 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 ARVCFO00192 962 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 ZNF213O14771 459 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 PQBP1O60828 265 aaKnown RBP7.77□□□□□ -1.17
SLIRP-203ENST00000554074 CABYRO75952 493 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 ASGR1P07306 291 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 RAG1P15918 1043 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 HAND2P61296 217 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 SMAD3P84022 425 aaKnown RBP7.77□□□□□ -1.17
SLIRP-203ENST00000554074 TNFAIP2Q03169 654 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 FAAP100Q0VG06 881 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 SHHQ15465 462 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 MUM1L1Q5H9M0 696 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 RRP12Q5JTH9 1297 aaKnown RBP7.77□□□□□ -1.17
SLIRP-203ENST00000554074 GNASQ5JWF2 1037 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 GPATCH4Q5T3I0 446 aaKnown RBP7.77□□□□□ -1.17
SLIRP-203ENST00000554074 IQSEC1Q6DN90 963 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 TTBK2Q6IQ55 1244 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 B4GALNT3Q6L9W6 998 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 RASGRP2Q7LDG7 609 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 TBC1D10CQ8IV04 446 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 ANKS1AQ92625 1134 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 DSCC1Q9BVC3 393 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 VTA1Q9NP79 307 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 DIAPH3Q9NSV4 1193 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 TMEM39AQ9NV64 488 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 ADD3Q9UEY8 706 aaKnown RBP7.77□□□□□ -1.17
SLIRP-203ENST00000554074 TBX21Q9UL17 535 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 TANC1Q9C0D5 1861 aa7.77□□□□□ -1.17
SLIRP-203ENST00000554074 TMEM265A0A087WTH1 108 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 ZEB2O60315 1214 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 TIMP1P01033 207 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 ITGB8P26012 769 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 SLC16A2P36021 539 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 ALDH5A1P51649 535 aaPredicted RBP7.76□□□□□ -1.17
SLIRP-203ENST00000554074 FPGSQ05932 587 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 FSCN1Q16658 493 aaKnown RBP7.76□□□□□ -1.17
SLIRP-203ENST00000554074 C9orf50Q5SZB4 431 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 ZNF697Q5TEC3 545 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 TAPT1Q6NXT6 567 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 CWC27Q6UX04 472 aaKnown RBP7.76□□□□□ -1.17
SLIRP-203ENST00000554074 NSMFQ6X4W1 530 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 Q7L0L9 218 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 TLK2Q86UE8 772 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 IQCA1Q86XH1 822 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 FAM126BQ8IXS8 530 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 SLC43A3Q8NBI5 491 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 SLC17A8Q8NDX2 589 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 RGS22Q8NE09 1264 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 DNERQ8NFT8 737 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 EXOC6Q8TAG9 804 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 MPHOSPH6Q99547 160 aaKnown RBP7.76□□□□□ -1.17
SLIRP-203ENST00000554074 CTNNA3Q9UI47 895 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 SUPT16HQ9Y5B9 1047 aaKnown RBP7.76□□□□□ -1.17
SLIRP-203ENST00000554074 A0A0C4DFX4 3053 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 SCN5AQ14524 2016 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 CUL9Q8IWT3 2517 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 NEDD4P46934 1319 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 FRMPD2Q68DX3 1309 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms