RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 PHIPQ8WWQ0 1821 aa10.61□□□□□ -0.71
GNE-206ENST00000543356 CAVIN2O95810 425 aa10.61□□□□□ -0.71
GNE-206ENST00000543356 TPM2P07951 284 aa10.61□□□□□ -0.71
GNE-206ENST00000543356 UVSSAQ2YD98 709 aa10.61□□□□□ -0.71
GNE-206ENST00000543356 JAKMIP3Q5VZ66 844 aa10.61□□□□□ -0.71
GNE-206ENST00000543356 FBXO11Q86XK2 927 aa10.61□□□□□ -0.71
GNE-206ENST00000543356 SCYL3Q8IZE3 742 aa10.61□□□□□ -0.71
GNE-206ENST00000543356 LPAR1Q92633 364 aa10.61□□□□□ -0.71
GNE-206ENST00000543356 SDF4Q9BRK5 362 aa10.61□□□□□ -0.71
GNE-206ENST00000543356 PANK2Q9BZ23 570 aa10.61□□□□□ -0.71
GNE-206ENST00000543356 GLIS2Q9BZE0 524 aaPredicted RBP10.61□□□□□ -0.71
GNE-206ENST00000543356 RANBP17Q9H2T7 1088 aaKnown RBP10.61□□□□□ -0.71
GNE-206ENST00000543356 PSTPIP2Q9H939 334 aa10.61□□□□□ -0.71
GNE-206ENST00000543356 WDR46O15213 610 aaKnown RBP10.6□□□□□ -0.71
GNE-206ENST00000543356 LONP1P36776 959 aaKnown RBP10.6□□□□□ -0.71
GNE-206ENST00000543356 STX1AQ16623 288 aa10.6□□□□□ -0.71
GNE-206ENST00000543356 KRBA2Q6ZNG9 492 aa10.6□□□□□ -0.71
GNE-206ENST00000543356 TBCKQ8TEA7 893 aa10.6□□□□□ -0.71
GNE-206ENST00000543356 FEZ1Q99689 392 aa10.6□□□□□ -0.71
GNE-206ENST00000543356 SPECC1Q5M775 1068 aa10.6□□□□□ -0.71
GNE-206ENST00000543356 PLCD3Q8N3E9 789 aa10.6□□□□□ -0.71
GNE-206ENST00000543356 RNF214Q8ND24 703 aa10.6□□□□□ -0.71
GNE-206ENST00000543356 L3MBTL3Q96JM7 780 aaPredicted RBP10.6□□□□□ -0.71
GNE-206ENST00000543356 WDR18Q9BV38 432 aa10.6□□□□□ -0.71
GNE-206ENST00000543356 TMEM51Q9NW97 253 aa10.6□□□□□ -0.71
GNE-206ENST00000543356 KIAA1468Q9P260 1216 aa10.6□□□□□ -0.71
GNE-206ENST00000543356 VWA3AA6NCI4 1184 aa10.59□□□□□ -0.71
GNE-206ENST00000543356 INPP5BP32019 993 aa10.59□□□□□ -0.71
GNE-206ENST00000543356 AP3B2Q13367 1082 aa10.59□□□□□ -0.71
GNE-206ENST00000543356 IL17AQ16552 155 aa10.59□□□□□ -0.71
GNE-206ENST00000543356 UBE2SQ16763 222 aa10.59□□□□□ -0.71
GNE-206ENST00000543356 LETM2Q2VYF4 491 aa10.59□□□□□ -0.71
GNE-206ENST00000543356 SUPT20HL1Q3ZLR7 823 aa10.59□□□□□ -0.71
GNE-206ENST00000543356 NOL9Q5SY16 702 aaKnown RBP10.59□□□□□ -0.71
GNE-206ENST00000543356 FAM200AQ8TCP9 573 aa10.59□□□□□ -0.71
GNE-206ENST00000543356 SYMPKQ92797 1274 aaKnown RBP10.59□□□□□ -0.71
GNE-206ENST00000543356 NAP1L4Q99733 375 aaKnown RBP10.59□□□□□ -0.71
GNE-206ENST00000543356 PYM1Q9BRP8 204 aaKnown RBP10.59□□□□□ -0.71
GNE-206ENST00000543356 AS3MTQ9HBK9 375 aa10.59□□□□□ -0.71
GNE-206ENST00000543356 USP25Q9UHP3 1055 aa10.59□□□□□ -0.71
GNE-206ENST00000543356 HOOK1Q9UJC3 728 aaKnown RBP10.59□□□□□ -0.71
GNE-206ENST00000543356 PARP14Q460N5 1801 aa10.59□□□□□ -0.71
GNE-206ENST00000543356 NEMFO60524 1076 aa10.59□□□□□ -0.71
GNE-206ENST00000543356 CCNT1O60563 726 aaKnown RBP10.59□□□□□ -0.71
GNE-206ENST00000543356 USP14P54578 494 aa10.59□□□□□ -0.71
GNE-206ENST00000543356 ZYXQ15942 572 aaKnown RBP10.59□□□□□ -0.71
GNE-206ENST00000543356 LONRF3Q496Y0 759 aa10.59□□□□□ -0.71
GNE-206ENST00000543356 ANO6Q4KMQ2 910 aa10.59□□□□□ -0.71
GNE-206ENST00000543356 KANK3Q6NY19 840 aa10.59□□□□□ -0.71
GNE-206ENST00000543356 CCDC84Q86UT8 332 aaPredicted RBP10.59□□□□□ -0.71
GNE-206ENST00000543356 SMAP1Q8IYB5 467 aaPredicted RBP10.59□□□□□ -0.71
GNE-206ENST00000543356 CNNM3Q8NE01 707 aa10.59□□□□□ -0.71
GNE-206ENST00000543356 ANP32BQ92688 251 aaKnown RBP10.59□□□□□ -0.71
GNE-206ENST00000543356 WRNIP1Q96S55 665 aa10.59□□□□□ -0.71
GNE-206ENST00000543356 SCN4AP35499 1836 aa10.59□□□□□ -0.71
GNE-206ENST00000543356 RBBP6Q7Z6E9 1792 aaKnown RBP10.58□□□□□ -0.72
GNE-206ENST00000543356 WDR90Q96KV7 1748 aa10.58□□□□□ -0.72
GNE-206ENST00000543356 OTOFQ9HC10 1997 aa10.58□□□□□ -0.72
GNE-206ENST00000543356 POLR2DO15514 142 aaKnown RBP10.58□□□□□ -0.72
GNE-206ENST00000543356 ACTN4O43707 911 aaKnown RBP10.58□□□□□ -0.72
GNE-206ENST00000543356 OR52Z1P0C646 297 aa10.58□□□□□ -0.72
GNE-206ENST00000543356 PPP4R3AQ6IN85 833 aa10.58□□□□□ -0.72
GNE-206ENST00000543356 DTHD1Q6ZMT9 781 aa10.58□□□□□ -0.72
GNE-206ENST00000543356 TMEM60Q9H2L4 133 aa10.58□□□□□ -0.72
GNE-206ENST00000543356 PICK1Q9NRD5 415 aa10.58□□□□□ -0.72
GNE-206ENST00000543356 ANO10Q9NW15 660 aa10.58□□□□□ -0.72
GNE-206ENST00000543356 TUBE1Q9UJT0 475 aa10.58□□□□□ -0.72
GNE-206ENST00000543356 GCFC2P16383 781 aaKnown RBP10.58□□□□□ -0.72
GNE-206ENST00000543356 SNAP25P60880 206 aa10.58□□□□□ -0.72
GNE-206ENST00000543356 DPY19L2Q6NUT2 758 aa10.58□□□□□ -0.72
GNE-206ENST00000543356 USP49Q70CQ1 688 aa10.58□□□□□ -0.72
GNE-206ENST00000543356 KLRG1Q96E93 195 aa10.58□□□□□ -0.72
GNE-206ENST00000543356 EPSTI1Q96J88 318 aa10.58□□□□□ -0.72
GNE-206ENST00000543356 MYH7BA7E2Y1 1941 aa10.57□□□□□ -0.72
GNE-206ENST00000543356 VGLL3A8MV65 326 aa10.57□□□□□ -0.72
GNE-206ENST00000543356 PIK3CDO00329 1044 aa10.57□□□□□ -0.72
GNE-206ENST00000543356 MEIS2O14770 477 aa10.57□□□□□ -0.72
GNE-206ENST00000543356 EDIL3O43854 480 aa10.57□□□□□ -0.72
GNE-206ENST00000543356 PTPRAP18433 802 aa10.57□□□□□ -0.72
GNE-206ENST00000543356 CCDC173Q0VFZ6 552 aa10.57□□□□□ -0.72
GNE-206ENST00000543356 USH1GQ495M9 461 aa10.57□□□□□ -0.72
GNE-206ENST00000543356 USP50Q70EL3 339 aaPredicted RBP10.57□□□□□ -0.72
GNE-206ENST00000543356 KIFC2Q96AC6 838 aa10.57□□□□□ -0.72
GNE-206ENST00000543356 DCPSQ96C86 337 aaKnown RBP10.57□□□□□ -0.72
GNE-206ENST00000543356 CCDC34Q96HJ3 373 aa10.57□□□□□ -0.72
GNE-206ENST00000543356 AK8Q96MA6 479 aa10.57□□□□□ -0.72
GNE-206ENST00000543356 PRDM10Q9NQV6 1147 aa10.57□□□□□ -0.72
GNE-206ENST00000543356 SERTAD1Q9UHV2 236 aa10.57□□□□□ -0.72
GNE-206ENST00000543356 ABCB11O95342 1321 aa10.57□□□□□ -0.72
GNE-206ENST00000543356 OPLAHO14841 1288 aa10.57□□□□□ -0.72
GNE-206ENST00000543356 FOSP01100 380 aaPredicted RBP10.57□□□□□ -0.72
GNE-206ENST00000543356 TXLNAP40222 546 aa10.57□□□□□ -0.72
GNE-206ENST00000543356 MDM2Q00987 491 aaPredicted RBP10.57□□□□□ -0.72
GNE-206ENST00000543356 PRAMEF18Q5VWM3 479 aa10.57□□□□□ -0.72
GNE-206ENST00000543356 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.57□□□□□ -0.72
GNE-206ENST00000543356 ZFP91Q96JP5 570 aaPredicted RBP10.57□□□□□ -0.72
GNE-206ENST00000543356 C12orf42Q96LP6 360 aa10.57□□□□□ -0.72
GNE-206ENST00000543356 PPP1R9BQ96SB3 815 aa10.57□□□□□ -0.72
GNE-206ENST00000543356 SLF1Q9BQI6 1058 aa10.57□□□□□ -0.72
GNE-206ENST00000543356 ANO3Q9BYT9 981 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms