RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 DDNO94850 711 aaPredicted RBP23.07■■□□□ 1.28
CDH5-202ENST00000539168 LETM2Q2VYF4 491 aa23.07■■□□□ 1.28
CDH5-202ENST00000539168 PANK2Q9BZ23 570 aa23.07■■□□□ 1.28
CDH5-202ENST00000539168 RANBP17Q9H2T7 1088 aaKnown RBP23.07■■□□□ 1.28
CDH5-202ENST00000539168 PICK1Q9NRD5 415 aa23.07■■□□□ 1.28
CDH5-202ENST00000539168 DOCK1Q14185 1865 aa23.06■■□□□ 1.28
CDH5-202ENST00000539168 POLR2DO15514 142 aaKnown RBP23.06■■□□□ 1.28
CDH5-202ENST00000539168 OR52Z1P0C646 297 aa23.06■■□□□ 1.28
CDH5-202ENST00000539168 ANO6Q4KMQ2 910 aa23.06■■□□□ 1.28
CDH5-202ENST00000539168 PPP4R3AQ6IN85 833 aa23.06■■□□□ 1.28
CDH5-202ENST00000539168 HIRAP54198 1017 aaPredicted RBP23.06■■□□□ 1.28
CDH5-202ENST00000539168 LONRF3Q496Y0 759 aa23.06■■□□□ 1.28
CDH5-202ENST00000539168 SYMPKQ92797 1274 aaKnown RBP23.06■■□□□ 1.28
CDH5-202ENST00000539168 FDX1P10109 184 aa23.05■■□□□ 1.28
CDH5-202ENST00000539168 USP11P51784 963 aa23.05■■□□□ 1.28
CDH5-202ENST00000539168 SPECC1Q5M775 1068 aa23.05■■□□□ 1.28
CDH5-202ENST00000539168 CEP57L1Q8IYX8 460 aa23.05■■□□□ 1.28
CDH5-202ENST00000539168 DCPSQ96C86 337 aaKnown RBP23.05■■□□□ 1.28
CDH5-202ENST00000539168 TMEM260Q9NX78 707 aa23.05■■□□□ 1.28
CDH5-202ENST00000539168 TUBE1Q9UJT0 475 aa23.05■■□□□ 1.28
CDH5-202ENST00000539168 SCAF8Q9UPN6 1271 aaKnown RBP23.05■■□□□ 1.28
CDH5-202ENST00000539168 GRIN3BO60391 1043 aa23.04■■□□□ 1.28
CDH5-202ENST00000539168 ZNF165P49910 485 aa23.04■■□□□ 1.28
CDH5-202ENST00000539168 KIAA1755Q5JYT7 1200 aa23.04■■□□□ 1.28
CDH5-202ENST00000539168 NOL9Q5SY16 702 aaKnown RBP23.04■■□□□ 1.28
CDH5-202ENST00000539168 MOXD1Q6UVY6 613 aa23.04■■□□□ 1.28
CDH5-202ENST00000539168 IQUBQ8NA54 791 aa23.04■■□□□ 1.28
CDH5-202ENST00000539168 L3MBTL3Q96JM7 780 aaPredicted RBP23.04■■□□□ 1.28
CDH5-202ENST00000539168 WRNIP1Q96S55 665 aa23.04■■□□□ 1.28
CDH5-202ENST00000539168 PIK3CDO00329 1044 aa23.03■■□□□ 1.28
CDH5-202ENST00000539168 SLFN14P0C7P3 912 aa23.03■■□□□ 1.28
CDH5-202ENST00000539168 PRPF38AQ8NAV1 312 aaKnown RBP23.03■■□□□ 1.28
CDH5-202ENST00000539168 PPP1R9BQ96SB3 815 aa23.03■■□□□ 1.28
CDH5-202ENST00000539168 RAB34Q9BZG1 259 aa23.03■■□□□ 1.28
CDH5-202ENST00000539168 MRPL11Q9Y3B7 192 aaKnown RBP23.03■■□□□ 1.28
CDH5-202ENST00000539168 ABCB11O95342 1321 aa23.03■■□□□ 1.28
CDH5-202ENST00000539168 INPP5BP32019 993 aa23.03■■□□□ 1.28
CDH5-202ENST00000539168 NLRP12P59046 1061 aa23.03■■□□□ 1.28
CDH5-202ENST00000539168 ZYXQ15942 572 aaKnown RBP23.03■■□□□ 1.28
CDH5-202ENST00000539168 USP50Q70EL3 339 aaPredicted RBP23.03■■□□□ 1.28
CDH5-202ENST00000539168 SULF1Q8IWU6 871 aa23.03■■□□□ 1.28
CDH5-202ENST00000539168 KIFC2Q96AC6 838 aa23.03■■□□□ 1.28
CDH5-202ENST00000539168 KLRG1Q96E93 195 aa23.03■■□□□ 1.28
CDH5-202ENST00000539168 EPSTI1Q96J88 318 aa23.03■■□□□ 1.28
CDH5-202ENST00000539168 CCSER1Q9C0I3 900 aa23.03■■□□□ 1.28
CDH5-202ENST00000539168 C19orf81C9J6K1 198 aa23.02■■□□□ 1.28
CDH5-202ENST00000539168 ACTN4O43707 911 aaKnown RBP23.02■■□□□ 1.28
CDH5-202ENST00000539168 POSTNQ15063 836 aa23.02■■□□□ 1.28
CDH5-202ENST00000539168 UBE2SQ16763 222 aa23.02■■□□□ 1.28
CDH5-202ENST00000539168 TMEM266Q2M3C6 531 aa23.02■■□□□ 1.28
CDH5-202ENST00000539168 ZNF280CQ8ND82 737 aa23.02■■□□□ 1.28
CDH5-202ENST00000539168 ZC3H15Q8WU90 426 aaKnown RBP23.02■■□□□ 1.28
CDH5-202ENST00000539168 GLIS2Q9BZE0 524 aaPredicted RBP23.02■■□□□ 1.28
CDH5-202ENST00000539168 CCDC39Q9UFE4 941 aa23.02■■□□□ 1.28
CDH5-202ENST00000539168 SERTAD1Q9UHV2 236 aa23.02■■□□□ 1.28
CDH5-202ENST00000539168 SPDYE3A6NKU9 549 aa23.01■■□□□ 1.27
CDH5-202ENST00000539168 SMC2O95347 1197 aa23.01■■□□□ 1.27
CDH5-202ENST00000539168 CALCRLQ16602 461 aa23.01■■□□□ 1.27
CDH5-202ENST00000539168 TRIML1Q8N9V2 468 aa23.01■■□□□ 1.27
CDH5-202ENST00000539168 SLF1Q9BQI6 1058 aa23.01■■□□□ 1.27
CDH5-202ENST00000539168 BPIFA3Q9BQP9 254 aa23.01■■□□□ 1.27
CDH5-202ENST00000539168 ANO3Q9BYT9 981 aa23.01■■□□□ 1.27
CDH5-202ENST00000539168 DNAJC25Q9H1X3 360 aa23.01■■□□□ 1.27
CDH5-202ENST00000539168 TMEM60Q9H2L4 133 aa23.01■■□□□ 1.27
CDH5-202ENST00000539168 MEIS2O14770 477 aa23■■□□□ 1.27
CDH5-202ENST00000539168 PTPRAP18433 802 aa23■■□□□ 1.27
CDH5-202ENST00000539168 UBA7P41226 1012 aa23■■□□□ 1.27
CDH5-202ENST00000539168 BACE1P56817 501 aa23■■□□□ 1.27
CDH5-202ENST00000539168 IL17AQ16552 155 aa23■■□□□ 1.27
CDH5-202ENST00000539168 USH1GQ495M9 461 aa23■■□□□ 1.27
CDH5-202ENST00000539168 EHMT1Q9H9B1 1298 aa23■■□□□ 1.27
CDH5-202ENST00000539168 CBX8Q9HC52 389 aa23■■□□□ 1.27
CDH5-202ENST00000539168 FRMD4AQ9P2Q2 1039 aaPredicted RBP23■■□□□ 1.27
CDH5-202ENST00000539168 MDM2Q00987 491 aaPredicted RBP23■■□□□ 1.27
CDH5-202ENST00000539168 GPR162Q16538 588 aa23■■□□□ 1.27
CDH5-202ENST00000539168 NT5DC1Q5TFE4 455 aa23■■□□□ 1.27
CDH5-202ENST00000539168 USP49Q70CQ1 688 aa23■■□□□ 1.27
CDH5-202ENST00000539168 SAMD3Q8N6K7 520 aa23■■□□□ 1.27
CDH5-202ENST00000539168 PDILTQ8N807 584 aa23■■□□□ 1.27
CDH5-202ENST00000539168 DHX58Q96C10 678 aa23■■□□□ 1.27
CDH5-202ENST00000539168 C12orf42Q96LP6 360 aa23■■□□□ 1.27
CDH5-202ENST00000539168 MTMR9Q96QG7 549 aa23■■□□□ 1.27
CDH5-202ENST00000539168 CUEDC2Q9H467 287 aa23■■□□□ 1.27
CDH5-202ENST00000539168 CYP3A7-CYP3A51PA0A087WV96 503 aa22.99■■□□□ 1.27
CDH5-202ENST00000539168 USP17L15C9J2P7 530 aa22.99■■□□□ 1.27
CDH5-202ENST00000539168 USP17L13C9JLJ4 530 aa22.99■■□□□ 1.27
CDH5-202ENST00000539168 USP17L11C9JVI0 530 aa22.99■■□□□ 1.27
CDH5-202ENST00000539168 USP17L18D6R9N7 530 aa22.99■■□□□ 1.27
CDH5-202ENST00000539168 USP17L22D6RA61 530 aa22.99■■□□□ 1.27
CDH5-202ENST00000539168 USP17L17D6RBQ6 530 aa22.99■■□□□ 1.27
CDH5-202ENST00000539168 USP17L19D6RCP7 530 aa22.99■■□□□ 1.27
CDH5-202ENST00000539168 USP17L20D6RJB6 530 aa22.99■■□□□ 1.27
CDH5-202ENST00000539168 GOLGA6L19H0YKK7 550 aa22.99■■□□□ 1.27
CDH5-202ENST00000539168 CYP3A7P24462 503 aa22.99■■□□□ 1.27
CDH5-202ENST00000539168 FXR2P51116 673 aaKnown RBP eCLIP22.99■■□□□ 1.27
CDH5-202ENST00000539168 USP17L24Q0WX57 530 aa22.99■■□□□ 1.27
CDH5-202ENST00000539168 PDIA5Q14554 519 aa22.99■■□□□ 1.27
CDH5-202ENST00000539168 USP17L6PQ6QN14 398 aa22.99■■□□□ 1.27
CDH5-202ENST00000539168 PDLIM2Q96JY6 352 aa22.99■■□□□ 1.27
CDH5-202ENST00000539168 MAGEF1Q9HAY2 307 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms