RNA–Protein interactions for RNA: ENST00000534796.5

PTP4A2-216, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-216ENST00000534796 TRIM43Q96BQ3 446 aaPredicted RBP12.61□□□□□ -0.39
PTP4A2-216ENST00000534796 HOMER2Q9NSB8 354 aa12.61□□□□□ -0.39
PTP4A2-216ENST00000534796 RNF146Q9NTX7 359 aa12.61□□□□□ -0.39
PTP4A2-216ENST00000534796 PNMA2Q9UL42 364 aa12.61□□□□□ -0.39
PTP4A2-216ENST00000534796 BOLA1Q9Y3E2 137 aa12.61□□□□□ -0.39
PTP4A2-216ENST00000534796 DNAH12Q6ZR08 3092 aa12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 FOXP2O15409 715 aa12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 FGRP09769 529 aa12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 C6orf222P0C671 652 aaPredicted RBP12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 NOVP48745 357 aa12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 MFAP1P55081 439 aaKnown RBP12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 GJA9P57773 515 aa12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 SHHQ15465 462 aa12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 KCNA10Q16322 511 aa12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 CCDC144BQ3MJ40 725 aa12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 POTEGQ6S5H5 508 aa12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 SH3RF1Q7Z6J0 888 aa12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 CCDC144CPQ8IYA2 1237 aa12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 FAM133AQ8N9E0 248 aa12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 DCAF4Q8WV16 495 aa12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 LENG1Q96BZ8 264 aaPredicted RBP12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 TRERF1Q96PN7 1200 aa12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 UPF3AQ9H1J1 476 aaKnown RBP12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 A1CFQ9NQ94 594 aaKnown RBP12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 IL17RBQ9NRM6 502 aa12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 TOMM22Q9NS69 142 aa12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 TMEM39AQ9NV64 488 aa12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 ZNFX1Q9P2E3 1918 aaKnown RBP12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 ZNF536O15090 1300 aa12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 ZMYM6O95789 1325 aa12.6□□□□□ -0.39
PTP4A2-216ENST00000534796 MYH4Q9Y623 1939 aa12.59□□□□□ -0.39
PTP4A2-216ENST00000534796 ALAS1P13196 640 aa12.59□□□□□ -0.39
PTP4A2-216ENST00000534796 NT5C2P49902 561 aa12.59□□□□□ -0.39
PTP4A2-216ENST00000534796 SMAD3P84022 425 aaKnown RBP12.59□□□□□ -0.39
PTP4A2-216ENST00000534796 CCDC96Q2M329 555 aa12.59□□□□□ -0.39
PTP4A2-216ENST00000534796 GNASQ5JWF2 1037 aa12.59□□□□□ -0.39
PTP4A2-216ENST00000534796 VPS53Q5VIR6 699 aa12.59□□□□□ -0.39
PTP4A2-216ENST00000534796 CCSAPQ6IQ19 270 aaPredicted RBP12.59□□□□□ -0.39
PTP4A2-216ENST00000534796 CCDC174Q6PII3 467 aa12.59□□□□□ -0.39
PTP4A2-216ENST00000534796 KCTD1Q719H9 257 aa12.59□□□□□ -0.39
PTP4A2-216ENST00000534796 FGD4Q96M96 766 aa12.59□□□□□ -0.39
PTP4A2-216ENST00000534796 AGBL1Q96MI9 1066 aa12.59□□□□□ -0.39
PTP4A2-216ENST00000534796 RWDD1Q9H446 243 aaPredicted RBP12.59□□□□□ -0.39
PTP4A2-216ENST00000534796 TCP11L1Q9NUJ3 509 aa12.59□□□□□ -0.39
PTP4A2-216ENST00000534796 PRR12Q9ULL5 1215 aa12.59□□□□□ -0.39
PTP4A2-216ENST00000534796 PLXNA1Q9UIW2 1896 aa12.59□□□□□ -0.39
PTP4A2-216ENST00000534796 A0A0U1RQG5 324 aaPredicted RBP12.58□□□□□ -0.4
PTP4A2-216ENST00000534796 TRIM6-TRIM34B2RNG4 842 aa12.58□□□□□ -0.4
PTP4A2-216ENST00000534796 NMT2O60551 498 aa12.58□□□□□ -0.4
PTP4A2-216ENST00000534796 CABYRO75952 493 aa12.58□□□□□ -0.4
PTP4A2-216ENST00000534796 FGAP02671 866 aa12.58□□□□□ -0.4
PTP4A2-216ENST00000534796 ICAM1P05362 532 aa12.58□□□□□ -0.4
PTP4A2-216ENST00000534796 ASGR1P07306 291 aa12.58□□□□□ -0.4
PTP4A2-216ENST00000534796 TOP1P11387 765 aaKnown RBP12.58□□□□□ -0.4
PTP4A2-216ENST00000534796 NKX3-2P78367 333 aa12.58□□□□□ -0.4
PTP4A2-216ENST00000534796 CNTN2Q02246 1040 aa12.58□□□□□ -0.4
PTP4A2-216ENST00000534796 TNFAIP2Q03169 654 aa12.58□□□□□ -0.4
PTP4A2-216ENST00000534796 FPGSQ05932 587 aa12.58□□□□□ -0.4
PTP4A2-216ENST00000534796 C9orf50Q5SZB4 431 aa12.58□□□□□ -0.4
PTP4A2-216ENST00000534796 NOL8Q76FK4 1167 aaKnown RBP12.58□□□□□ -0.4
PTP4A2-216ENST00000534796 VTI1AQ96AJ9 217 aa12.58□□□□□ -0.4
PTP4A2-216ENST00000534796 TTC14Q96N46 770 aa12.58□□□□□ -0.4
PTP4A2-216ENST00000534796 SEZ6LQ9BYH1 1024 aa12.58□□□□□ -0.4
PTP4A2-216ENST00000534796 RNF41Q9H4P4 317 aaPredicted RBP12.58□□□□□ -0.4
PTP4A2-216ENST00000534796 CCPG1Q9ULG6 757 aa12.58□□□□□ -0.4
PTP4A2-216ENST00000534796 LTBP2Q14767 1821 aa12.58□□□□□ -0.4
PTP4A2-216ENST00000534796 LOC102724159A0A0B4J2E5 919 aa12.57□□□□□ -0.4
PTP4A2-216ENST00000534796 A0A0D9SFI3 127 aa12.57□□□□□ -0.4
PTP4A2-216ENST00000534796 TLR3O15455 904 aaKnown RBP12.57□□□□□ -0.4
PTP4A2-216ENST00000534796 ZEB2O60315 1214 aa12.57□□□□□ -0.4
PTP4A2-216ENST00000534796 HSPD1P10809 573 aaKnown RBP12.57□□□□□ -0.4
PTP4A2-216ENST00000534796 FAAP100Q0VG06 881 aa12.57□□□□□ -0.4
PTP4A2-216ENST00000534796 PWP2Q15269 919 aaKnown RBP12.57□□□□□ -0.4
PTP4A2-216ENST00000534796 RRP12Q5JTH9 1297 aaKnown RBP12.57□□□□□ -0.4
PTP4A2-216ENST00000534796 LCE2DQ5TA82 110 aaPredicted RBP12.57□□□□□ -0.4
PTP4A2-216ENST00000534796 BTNL9Q6UXG8 535 aa12.57□□□□□ -0.4
PTP4A2-216ENST00000534796 RNPC3Q96LT9 517 aaKnown RBP12.57□□□□□ -0.4
PTP4A2-216ENST00000534796 FAM227BQ96M60 508 aa12.57□□□□□ -0.4
PTP4A2-216ENST00000534796 TMEM121BQ9BXQ6 578 aaPredicted RBP12.57□□□□□ -0.4
PTP4A2-216ENST00000534796 LNPKQ9C0E8 428 aa12.57□□□□□ -0.4
PTP4A2-216ENST00000534796 KATNBL1Q9H079 304 aa12.57□□□□□ -0.4
PTP4A2-216ENST00000534796 AP5M1Q9H0R1 490 aa12.57□□□□□ -0.4
PTP4A2-216ENST00000534796 RANBP17Q9H2T7 1088 aaKnown RBP12.57□□□□□ -0.4
PTP4A2-216ENST00000534796 INCENPQ9NQS7 918 aa12.57□□□□□ -0.4
PTP4A2-216ENST00000534796 CYP39A1Q9NYL5 469 aa12.57□□□□□ -0.4
PTP4A2-216ENST00000534796 ADD3Q9UEY8 706 aaKnown RBP12.57□□□□□ -0.4
PTP4A2-216ENST00000534796 MTMR7Q9Y216 660 aa12.57□□□□□ -0.4
PTP4A2-216ENST00000534796 CCDC171Q6TFL3 1326 aa12.57□□□□□ -0.4
PTP4A2-216ENST00000534796 SMCHD1A6NHR9 2005 aa12.56□□□□□ -0.4
PTP4A2-216ENST00000534796 TMEM265A0A087WTH1 108 aa12.56□□□□□ -0.4
PTP4A2-216ENST00000534796 MYADML2A6NDP7 307 aa12.56□□□□□ -0.4
PTP4A2-216ENST00000534796 SOWAHBA6NEL2 793 aa12.56□□□□□ -0.4
PTP4A2-216ENST00000534796 ARVCFO00192 962 aa12.56□□□□□ -0.4
PTP4A2-216ENST00000534796 DLL1O00548 723 aa12.56□□□□□ -0.4
PTP4A2-216ENST00000534796 TIMP1P01033 207 aa12.56□□□□□ -0.4
PTP4A2-216ENST00000534796 CDK7P50613 346 aa12.56□□□□□ -0.4
PTP4A2-216ENST00000534796 SYDE2Q5VT97 1194 aa12.56□□□□□ -0.4
PTP4A2-216ENST00000534796 IQSEC1Q6DN90 963 aa12.56□□□□□ -0.4
PTP4A2-216ENST00000534796 NSMFQ6X4W1 530 aa12.56□□□□□ -0.4
PTP4A2-216ENST00000534796 MFSD6Q6ZSS7 791 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms