RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 JMJD4Q9H9V9 463 aa20.23■□□□□ 0.83
USP35-202ENST00000528910 ASTN1O14525 1302 aa20.23■□□□□ 0.83
USP35-202ENST00000528910 KLRF2D3W0D1 207 aa20.22■□□□□ 0.83
USP35-202ENST00000528910 EPB41L2O43491 1005 aaKnown RBP20.22■□□□□ 0.83
USP35-202ENST00000528910 REC8O95072 547 aa20.22■□□□□ 0.83
USP35-202ENST00000528910 SNAI1O95863 264 aaPredicted RBP20.22■□□□□ 0.83
USP35-202ENST00000528910 ZNF865P0CJ78 1059 aaPredicted RBP20.22■□□□□ 0.83
USP35-202ENST00000528910 CNGA1P29973 690 aa20.22■□□□□ 0.83
USP35-202ENST00000528910 LIFRP42702 1097 aa20.22■□□□□ 0.83
USP35-202ENST00000528910 CNTN2Q02246 1040 aa20.22■□□□□ 0.83
USP35-202ENST00000528910 PRAMEF19Q5SWL8 479 aa20.22■□□□□ 0.83
USP35-202ENST00000528910 CATIPQ7Z7H3 387 aa20.22■□□□□ 0.83
USP35-202ENST00000528910 ZNF654Q8IZM8 581 aa20.22■□□□□ 0.83
USP35-202ENST00000528910 MAP3K14Q99558 947 aa20.22■□□□□ 0.83
USP35-202ENST00000528910 GPHNQ9NQX3 736 aaPredicted RBP20.22■□□□□ 0.83
USP35-202ENST00000528910 SOWAHBA6NEL2 793 aa20.21■□□□□ 0.83
USP35-202ENST00000528910 HSPA4P34932 840 aa20.21■□□□□ 0.83
USP35-202ENST00000528910 KRT32Q14532 448 aa20.21■□□□□ 0.83
USP35-202ENST00000528910 SLC35G1Q2M3R5 365 aa20.21■□□□□ 0.83
USP35-202ENST00000528910 QRICH1Q2TAL8 776 aa20.21■□□□□ 0.83
USP35-202ENST00000528910 NSMFQ6X4W1 530 aa20.21■□□□□ 0.83
USP35-202ENST00000528910 ARMCX2Q7L311 632 aa20.21■□□□□ 0.83
USP35-202ENST00000528910 NECAB2Q7Z6G3 386 aa20.21■□□□□ 0.83
USP35-202ENST00000528910 PAWRQ96IZ0 340 aaKnown RBP20.21■□□□□ 0.83
USP35-202ENST00000528910 NEK1Q96PY6 1258 aa20.21■□□□□ 0.83
USP35-202ENST00000528910 HTATIP2Q9BUP3 242 aa20.21■□□□□ 0.83
USP35-202ENST00000528910 MAF1Q9H063 256 aa20.21■□□□□ 0.83
USP35-202ENST00000528910 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.21■□□□□ 0.83
USP35-202ENST00000528910 CNPY2Q9Y2B0 182 aa20.21■□□□□ 0.83
USP35-202ENST00000528910 ABCB11O95342 1321 aa20.21■□□□□ 0.83
USP35-202ENST00000528910 COL6A1P12109 1028 aa20.2■□□□□ 0.82
USP35-202ENST00000528910 ADCK5Q3MIX3 580 aa20.2■□□□□ 0.82
USP35-202ENST00000528910 PRPF38BQ5VTL8 546 aaKnown RBP20.2■□□□□ 0.82
USP35-202ENST00000528910 SLC30A10Q6XR72 485 aa20.2■□□□□ 0.82
USP35-202ENST00000528910 SGMS1Q86VZ5 419 aa20.2■□□□□ 0.82
USP35-202ENST00000528910 TMTC2Q8N394 836 aa20.2■□□□□ 0.82
USP35-202ENST00000528910 KATNBL1Q9H079 304 aa20.2■□□□□ 0.82
USP35-202ENST00000528910 RIOX1Q9H6W3 641 aa20.2■□□□□ 0.82
USP35-202ENST00000528910 LOC102724159A0A0B4J2E5 919 aa20.19■□□□□ 0.82
USP35-202ENST00000528910 DHX16O60231 1041 aaKnown RBP20.19■□□□□ 0.82
USP35-202ENST00000528910 AKR1A1P14550 325 aa20.19■□□□□ 0.82
USP35-202ENST00000528910 PWP2Q15269 919 aaKnown RBP20.19■□□□□ 0.82
USP35-202ENST00000528910 USH1GQ495M9 461 aa20.19■□□□□ 0.82
USP35-202ENST00000528910 CCDC144CPQ8IYA2 1237 aa20.19■□□□□ 0.82
USP35-202ENST00000528910 RGS22Q8NE09 1264 aa20.19■□□□□ 0.82
USP35-202ENST00000528910 MORC4Q8TE76 937 aa20.19■□□□□ 0.82
USP35-202ENST00000528910 ABHD16BQ9H3Z7 469 aa20.19■□□□□ 0.82
USP35-202ENST00000528910 ASB14A6NK59 587 aa20.18■□□□□ 0.82
USP35-202ENST00000528910 DNM1LO00429 736 aa20.18■□□□□ 0.82
USP35-202ENST00000528910 ZBTB5O15062 677 aa20.18■□□□□ 0.82
USP35-202ENST00000528910 CYTH3O43739 400 aa20.18■□□□□ 0.82
USP35-202ENST00000528910 EXOSC10Q01780 885 aaKnown RBP20.18■□□□□ 0.82
USP35-202ENST00000528910 BAATQ14032 418 aaPredicted RBP20.18■□□□□ 0.82
USP35-202ENST00000528910 RNF207Q6ZRF8 634 aa20.18■□□□□ 0.82
USP35-202ENST00000528910 FBXO11Q86XK2 927 aa20.18■□□□□ 0.82
USP35-202ENST00000528910 MYL10Q9BUA6 226 aa20.18■□□□□ 0.82
USP35-202ENST00000528910 C11orf49Q9H6J7 331 aa20.18■□□□□ 0.82
USP35-202ENST00000528910 KIAA1217Q5T5P2 1943 aa20.17■□□□□ 0.82
USP35-202ENST00000528910 PPP1R11O60927 126 aaPredicted RBP20.17■□□□□ 0.82
USP35-202ENST00000528910 KIF5BP33176 963 aa20.17■□□□□ 0.82
USP35-202ENST00000528910 RPS6P62753 249 aaKnown RBP20.17■□□□□ 0.82
USP35-202ENST00000528910 GHRHRQ02643 423 aa20.17■□□□□ 0.82
USP35-202ENST00000528910 DHX32Q7L7V1 743 aaKnown RBP20.17■□□□□ 0.82
USP35-202ENST00000528910 CTCFLQ8NI51 663 aaPredicted RBP20.17■□□□□ 0.82
USP35-202ENST00000528910 NUP133Q8WUM0 1156 aa20.17■□□□□ 0.82
USP35-202ENST00000528910 SPZ1Q9BXG8 430 aa20.17■□□□□ 0.82
USP35-202ENST00000528910 AMNQ9BXJ7 453 aa20.17■□□□□ 0.82
USP35-202ENST00000528910 LRRC2Q9BYS8 371 aa20.17■□□□□ 0.82
USP35-202ENST00000528910 ADD3Q9UEY8 706 aaKnown RBP20.17■□□□□ 0.82
USP35-202ENST00000528910 ZHX1Q9UKY1 873 aaPredicted RBP20.17■□□□□ 0.82
USP35-202ENST00000528910 PTPDC1A2A3K4 754 aa20.16■□□□□ 0.82
USP35-202ENST00000528910 CCDC69A6NI79 296 aa20.16■□□□□ 0.82
USP35-202ENST00000528910 HMGB1P09429 215 aaKnown RBP20.16■□□□□ 0.82
USP35-202ENST00000528910 CALM1P0DP23 149 aa20.16■□□□□ 0.82
USP35-202ENST00000528910 CALM2P0DP24 149 aa20.16■□□□□ 0.82
USP35-202ENST00000528910 CALM3P0DP25 149 aa20.16■□□□□ 0.82
USP35-202ENST00000528910 RARBP10826 455 aa20.16■□□□□ 0.82
USP35-202ENST00000528910 ALDH5A1P51649 535 aaPredicted RBP20.16■□□□□ 0.82
USP35-202ENST00000528910 ACVR2BQ13705 512 aa20.16■□□□□ 0.82
USP35-202ENST00000528910 ANO1Q5XXA6 986 aa20.16■□□□□ 0.82
USP35-202ENST00000528910 NFXL1Q6ZNB6 911 aa20.16■□□□□ 0.82
USP35-202ENST00000528910 PURBQ96QR8 312 aaKnown RBP20.16■□□□□ 0.82
USP35-202ENST00000528910 VAT1LQ9HCJ6 419 aa20.16■□□□□ 0.82
USP35-202ENST00000528910 SNX14Q9Y5W7 946 aa20.16■□□□□ 0.82
USP35-202ENST00000528910 SMARCA1P28370 1054 aa20.15■□□□□ 0.82
USP35-202ENST00000528910 ARRDC4Q8NCT1 418 aa20.15■□□□□ 0.82
USP35-202ENST00000528910 XPNPEP3Q9NQH7 507 aa20.15■□□□□ 0.82
USP35-202ENST00000528910 FAM184BQ9ULE4 1060 aa20.15■□□□□ 0.82
USP35-202ENST00000528910 MRPL11Q9Y3B7 192 aaKnown RBP20.15■□□□□ 0.82
USP35-202ENST00000528910 SLC12A7Q9Y666 1083 aa20.15■□□□□ 0.82
USP35-202ENST00000528910 CEP290O15078 2479 aa20.14■□□□□ 0.82
USP35-202ENST00000528910 SYNRGQ9UMZ2 1314 aa20.14■□□□□ 0.81
USP35-202ENST00000528910 OPLAHO14841 1288 aa20.14■□□□□ 0.81
USP35-202ENST00000528910 ADCY6O43306 1168 aa20.14■□□□□ 0.81
USP35-202ENST00000528910 ADAMTS4O75173 837 aa20.14■□□□□ 0.81
USP35-202ENST00000528910 EDNRBP24530 442 aa20.14■□□□□ 0.81
USP35-202ENST00000528910 CALML3P27482 149 aa20.14■□□□□ 0.81
USP35-202ENST00000528910 GNAQP50148 359 aa20.14■□□□□ 0.81
USP35-202ENST00000528910 CCDC144BQ3MJ40 725 aa20.14■□□□□ 0.81
USP35-202ENST00000528910 MCF2L2Q86YR7 1114 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms