RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 NKX3-2P78367 333 aa13.37□□□□□ -0.27
CTNNA1-234ENST00000522227 RNF135Q8IUD6 432 aa13.37□□□□□ -0.27
CTNNA1-234ENST00000522227 FBXO22Q8NEZ5 403 aa13.37□□□□□ -0.27
CTNNA1-234ENST00000522227 SDR42E1Q8WUS8 393 aa13.37□□□□□ -0.27
CTNNA1-234ENST00000522227 C17orf80Q9BSJ5 609 aa13.37□□□□□ -0.27
CTNNA1-234ENST00000522227 SMC4Q9NTJ3 1288 aa13.37□□□□□ -0.27
CTNNA1-234ENST00000522227 FAM50BQ9Y247 325 aa13.37□□□□□ -0.27
CTNNA1-234ENST00000522227 NAV1Q8NEY1 1877 aa13.36□□□□□ -0.27
CTNNA1-234ENST00000522227 TET1Q8NFU7 2136 aa13.36□□□□□ -0.27
CTNNA1-234ENST00000522227 USP34Q70CQ2 3546 aa13.36□□□□□ -0.27
CTNNA1-234ENST00000522227 MAGEB6P1A0A0J9YX57 407 aa13.36□□□□□ -0.27
CTNNA1-234ENST00000522227 TMEM221A6NGB7 291 aa13.36□□□□□ -0.27
CTNNA1-234ENST00000522227 E9PSI1 815 aa13.36□□□□□ -0.27
CTNNA1-234ENST00000522227 M0R296 226 aa13.36□□□□□ -0.27
CTNNA1-234ENST00000522227 KRT37O76014 449 aa13.36□□□□□ -0.27
CTNNA1-234ENST00000522227 RFC2P35250 354 aa13.36□□□□□ -0.27
CTNNA1-234ENST00000522227 SLF1Q9BQI6 1058 aa13.36□□□□□ -0.27
CTNNA1-234ENST00000522227 SEZ6LQ9BYH1 1024 aa13.36□□□□□ -0.27
CTNNA1-234ENST00000522227 ANTXR1Q9H6X2 564 aa13.36□□□□□ -0.27
CTNNA1-234ENST00000522227 GOPCQ9HD26 462 aa13.36□□□□□ -0.27
CTNNA1-234ENST00000522227 CLDND1Q9NY35 253 aa13.36□□□□□ -0.27
CTNNA1-234ENST00000522227 TECTAO75443 2155 aa13.36□□□□□ -0.27
CTNNA1-234ENST00000522227 ZBED4O75132 1171 aa13.35□□□□□ -0.27
CTNNA1-234ENST00000522227 TNNI3KQ59H18 835 aa13.35□□□□□ -0.27
CTNNA1-234ENST00000522227 HERC4Q5GLZ8 1057 aaPredicted RBP13.35□□□□□ -0.27
CTNNA1-234ENST00000522227 TCEAL5Q5H9L2 206 aa13.35□□□□□ -0.27
CTNNA1-234ENST00000522227 CERS3Q8IU89 383 aa13.35□□□□□ -0.27
CTNNA1-234ENST00000522227 FBXO16Q8IX29 292 aaPredicted RBP13.35□□□□□ -0.27
CTNNA1-234ENST00000522227 EDAQ92838 391 aa13.35□□□□□ -0.27
CTNNA1-234ENST00000522227 KIFC2Q96AC6 838 aa13.35□□□□□ -0.27
CTNNA1-234ENST00000522227 CRNKL1Q9BZJ0 848 aaKnown RBP13.35□□□□□ -0.27
CTNNA1-234ENST00000522227 TLR7Q9NYK1 1049 aaKnown RBP13.35□□□□□ -0.27
CTNNA1-234ENST00000522227 PRKAG3Q9UGI9 489 aa13.35□□□□□ -0.27
CTNNA1-234ENST00000522227 FPGT-TNNI3KV9GXZ4 949 aa13.35□□□□□ -0.27
CTNNA1-234ENST00000522227 SPTBN4Q9H254 2564 aa13.35□□□□□ -0.27
CTNNA1-234ENST00000522227 PTPRZ1P23471 2315 aaPredicted RBP13.34□□□□□ -0.27
CTNNA1-234ENST00000522227 PNMA6EA0A0J9YXQ4 647 aa13.34□□□□□ -0.27
CTNNA1-234ENST00000522227 H0Y858 1186 aa13.34□□□□□ -0.27
CTNNA1-234ENST00000522227 RGS20O76081 388 aa13.34□□□□□ -0.27
CTNNA1-234ENST00000522227 BAIAP3O94812 1187 aa13.34□□□□□ -0.27
CTNNA1-234ENST00000522227 OS9Q13438 667 aaPredicted RBP13.34□□□□□ -0.27
CTNNA1-234ENST00000522227 NBPF20Q3BBV1 942 aa13.34□□□□□ -0.27
CTNNA1-234ENST00000522227 ASCL5Q7RTU5 278 aa13.34□□□□□ -0.27
CTNNA1-234ENST00000522227 MRPL38Q96DV4 380 aaKnown RBP13.34□□□□□ -0.27
CTNNA1-234ENST00000522227 RAD9AQ99638 391 aa13.34□□□□□ -0.27
CTNNA1-234ENST00000522227 PRRX2Q99811 253 aa13.34□□□□□ -0.27
CTNNA1-234ENST00000522227 RIOK1Q9BRS2 568 aaKnown RBP13.34□□□□□ -0.27
CTNNA1-234ENST00000522227 MRS2Q9HD23 443 aa13.34□□□□□ -0.27
CTNNA1-234ENST00000522227 TLR9Q9NR96 1032 aa13.34□□□□□ -0.27
CTNNA1-234ENST00000522227 NOB1Q9ULX3 412 aaKnown RBP13.34□□□□□ -0.27
CTNNA1-234ENST00000522227 NOD1Q9Y239 953 aa13.34□□□□□ -0.27
CTNNA1-234ENST00000522227 CYP2D7A0A087X1C5 515 aa13.33□□□□□ -0.28
CTNNA1-234ENST00000522227 ID4P47928 161 aa13.33□□□□□ -0.28
CTNNA1-234ENST00000522227 VCPP55072 806 aaKnown RBP13.33□□□□□ -0.28
CTNNA1-234ENST00000522227 TCTN1Q2MV58 587 aa13.33□□□□□ -0.28
CTNNA1-234ENST00000522227 TRIM67Q6ZTA4 783 aa13.33□□□□□ -0.28
CTNNA1-234ENST00000522227 KIAA1211Q6ZU35 1233 aa13.33□□□□□ -0.28
CTNNA1-234ENST00000522227 BANK1Q8NDB2 785 aa13.33□□□□□ -0.28
CTNNA1-234ENST00000522227 PABPC5Q96DU9 382 aaKnown RBP13.33□□□□□ -0.28
CTNNA1-234ENST00000522227 CCDC8Q9H0W5 538 aaPredicted RBP13.33□□□□□ -0.28
CTNNA1-234ENST00000522227 GPHNQ9NQX3 736 aaPredicted RBP13.33□□□□□ -0.28
CTNNA1-234ENST00000522227 SWAP70Q9UH65 585 aa13.33□□□□□ -0.28
CTNNA1-234ENST00000522227 CSPG5O95196 566 aa13.32□□□□□ -0.28
CTNNA1-234ENST00000522227 GJB5O95377 273 aa13.32□□□□□ -0.28
CTNNA1-234ENST00000522227 CDK8P49336 464 aa13.32□□□□□ -0.28
CTNNA1-234ENST00000522227 BFSP2Q13515 415 aa13.32□□□□□ -0.28
CTNNA1-234ENST00000522227 PTPROQ16827 1216 aa13.32□□□□□ -0.28
CTNNA1-234ENST00000522227 ERMP1Q7Z2K6 904 aa13.32□□□□□ -0.28
CTNNA1-234ENST00000522227 BMP8AQ7Z5Y6 402 aa13.32□□□□□ -0.28
CTNNA1-234ENST00000522227 RPAINQ86UA6 219 aa13.32□□□□□ -0.28
CTNNA1-234ENST00000522227 FBXL6Q8N531 539 aa13.32□□□□□ -0.28
CTNNA1-234ENST00000522227 DCP1AQ9NPI6 582 aaPredicted RBP13.32□□□□□ -0.28
CTNNA1-234ENST00000522227 MYH8P13535 1937 aa13.32□□□□□ -0.28
CTNNA1-234ENST00000522227 SIP14410 1827 aa13.32□□□□□ -0.28
CTNNA1-234ENST00000522227 COL4A6Q14031 1691 aa13.31□□□□□ -0.28
CTNNA1-234ENST00000522227 ASB14A6NK59 587 aa13.31□□□□□ -0.28
CTNNA1-234ENST00000522227 PURAQ00577 322 aaKnown RBP13.31□□□□□ -0.28
CTNNA1-234ENST00000522227 MTX1Q13505 466 aa13.31□□□□□ -0.28
CTNNA1-234ENST00000522227 TIGD5Q53EQ6 642 aa13.31□□□□□ -0.28
CTNNA1-234ENST00000522227 IQSEC1Q6DN90 963 aa13.31□□□□□ -0.28
CTNNA1-234ENST00000522227 TAPT1Q6NXT6 567 aa13.31□□□□□ -0.28
CTNNA1-234ENST00000522227 STK11IPQ8N1F8 1099 aa13.31□□□□□ -0.28
CTNNA1-234ENST00000522227 PRPF38AQ8NAV1 312 aaKnown RBP13.31□□□□□ -0.28
CTNNA1-234ENST00000522227 CHST13Q8NET6 341 aa13.31□□□□□ -0.28
CTNNA1-234ENST00000522227 CHMP4CQ96CF2 233 aa13.31□□□□□ -0.28
CTNNA1-234ENST00000522227 KANSL2Q9H9L4 492 aa13.31□□□□□ -0.28
CTNNA1-234ENST00000522227 POLR3EQ9NVU0 708 aa13.31□□□□□ -0.28
CTNNA1-234ENST00000522227 FBXO40Q9UH90 709 aa13.31□□□□□ -0.28
CTNNA1-234ENST00000522227 CTNNA3Q9UI47 895 aa13.31□□□□□ -0.28
CTNNA1-234ENST00000522227 DBNLQ9UJU6 430 aaKnown RBP13.31□□□□□ -0.28
CTNNA1-234ENST00000522227 ISY1Q9ULR0 285 aaKnown RBP13.31□□□□□ -0.28
CTNNA1-234ENST00000522227 COG6Q9Y2V7 657 aa13.31□□□□□ -0.28
CTNNA1-234ENST00000522227 TANC1Q9C0D5 1861 aa13.3□□□□□ -0.28
CTNNA1-234ENST00000522227 STXBP3O00186 592 aa13.3□□□□□ -0.28
CTNNA1-234ENST00000522227 PITPNM1O00562 1244 aa13.3□□□□□ -0.28
CTNNA1-234ENST00000522227 PRKAB2O43741 272 aa13.3□□□□□ -0.28
CTNNA1-234ENST00000522227 KDM4AO75164 1064 aa13.3□□□□□ -0.28
CTNNA1-234ENST00000522227 GNAI3P08754 354 aa13.3□□□□□ -0.28
CTNNA1-234ENST00000522227 LCORLQ8N3X6 602 aa13.3□□□□□ -0.28
CTNNA1-234ENST00000522227 FAM133AQ8N9E0 248 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms