RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 CYP39A1Q9NYL5 469 aa23.51■■□□□ 1.35
UBE2D3-220ENST00000505307 STXBP5LQ9Y2K9 1186 aa23.51■■□□□ 1.35
UBE2D3-220ENST00000505307 IGHDP01880 384 aa23.5■■□□□ 1.35
UBE2D3-220ENST00000505307 ASGR1P07306 291 aa23.5■■□□□ 1.35
UBE2D3-220ENST00000505307 HAND2P61296 217 aa23.5■■□□□ 1.35
UBE2D3-220ENST00000505307 TNFAIP2Q03169 654 aa23.5■■□□□ 1.35
UBE2D3-220ENST00000505307 SHHQ15465 462 aa23.5■■□□□ 1.35
UBE2D3-220ENST00000505307 GNASQ5JWF2 1037 aa23.5■■□□□ 1.35
UBE2D3-220ENST00000505307 SLC17A8Q8NDX2 589 aa23.5■■□□□ 1.35
UBE2D3-220ENST00000505307 ESR2Q92731 530 aa23.5■■□□□ 1.35
UBE2D3-220ENST00000505307 LOC102724159A0A0B4J2E5 919 aa23.49■■□□□ 1.35
UBE2D3-220ENST00000505307 SNAP25P60880 206 aa23.49■■□□□ 1.35
UBE2D3-220ENST00000505307 PWP2Q15269 919 aaKnown RBP23.49■■□□□ 1.35
UBE2D3-220ENST00000505307 CCDC178Q5BJE1 867 aa23.49■■□□□ 1.35
UBE2D3-220ENST00000505307 MUM1L1Q5H9M0 696 aa23.49■■□□□ 1.35
UBE2D3-220ENST00000505307 DIAPH3Q9NSV4 1193 aa23.49■■□□□ 1.35
UBE2D3-220ENST00000505307 MYADML2A6NDP7 307 aa23.48■■□□□ 1.35
UBE2D3-220ENST00000505307 ZNF213O14771 459 aa23.48■■□□□ 1.35
UBE2D3-220ENST00000505307 ADCY6O43306 1168 aa23.48■■□□□ 1.35
UBE2D3-220ENST00000505307 PDHBP11177 359 aa23.48■■□□□ 1.35
UBE2D3-220ENST00000505307 FAAP100Q0VG06 881 aa23.48■■□□□ 1.35
UBE2D3-220ENST00000505307 IQSEC1Q6DN90 963 aa23.48■■□□□ 1.35
UBE2D3-220ENST00000505307 TTBK2Q6IQ55 1244 aa23.48■■□□□ 1.35
UBE2D3-220ENST00000505307 NSMFQ6X4W1 530 aa23.48■■□□□ 1.35
UBE2D3-220ENST00000505307 NOL8Q76FK4 1167 aaKnown RBP23.48■■□□□ 1.35
UBE2D3-220ENST00000505307 RASGRP2Q7LDG7 609 aa23.48■■□□□ 1.35
UBE2D3-220ENST00000505307 EXOC6Q8TAG9 804 aa23.48■■□□□ 1.35
UBE2D3-220ENST00000505307 VTI1AQ96AJ9 217 aa23.48■■□□□ 1.35
UBE2D3-220ENST00000505307 ADD3Q9UEY8 706 aaKnown RBP23.48■■□□□ 1.35
UBE2D3-220ENST00000505307 MCM3APO60318 1980 aa23.48■■□□□ 1.35
UBE2D3-220ENST00000505307 A0A0U1RQG5 324 aaPredicted RBP23.47■■□□□ 1.35
UBE2D3-220ENST00000505307 CABYRO75952 493 aa23.47■■□□□ 1.35
UBE2D3-220ENST00000505307 SLC16A2P36021 539 aa23.47■■□□□ 1.35
UBE2D3-220ENST00000505307 CDK7P50613 346 aa23.47■■□□□ 1.35
UBE2D3-220ENST00000505307 C9orf50Q5SZB4 431 aa23.47■■□□□ 1.35
UBE2D3-220ENST00000505307 DGKHQ86XP1 1220 aa23.47■■□□□ 1.35
UBE2D3-220ENST00000505307 MORC4Q8TE76 937 aa23.47■■□□□ 1.35
UBE2D3-220ENST00000505307 VTA1Q9NP79 307 aa23.47■■□□□ 1.35
UBE2D3-220ENST00000505307 GPCPD1Q9NPB8 672 aa23.47■■□□□ 1.35
UBE2D3-220ENST00000505307 Q9Y3F1 56 aa23.47■■□□□ 1.35
UBE2D3-220ENST00000505307 ARVCFO00192 962 aa23.46■■□□□ 1.35
UBE2D3-220ENST00000505307 SNHG28P0DPA3 235 aa23.46■■□□□ 1.35
UBE2D3-220ENST00000505307 ITGB8P26012 769 aa23.46■■□□□ 1.35
UBE2D3-220ENST00000505307 SMAD3P84022 425 aaKnown RBP23.46■■□□□ 1.35
UBE2D3-220ENST00000505307 FPGSQ05932 587 aa23.46■■□□□ 1.35
UBE2D3-220ENST00000505307 ZNF543Q08ER8 600 aa23.46■■□□□ 1.35
UBE2D3-220ENST00000505307 GPATCH4Q5T3I0 446 aaKnown RBP23.46■■□□□ 1.35
UBE2D3-220ENST00000505307 CWC27Q6UX04 472 aaKnown RBP23.46■■□□□ 1.35
UBE2D3-220ENST00000505307 TBC1D10CQ8IV04 446 aa23.46■■□□□ 1.35
UBE2D3-220ENST00000505307 SEZ6LQ9BYH1 1024 aa23.46■■□□□ 1.35
UBE2D3-220ENST00000505307 AP5M1Q9H0R1 490 aa23.46■■□□□ 1.35
UBE2D3-220ENST00000505307 GNEQ9Y223 722 aaKnown RBP23.46■■□□□ 1.35
UBE2D3-220ENST00000505307 COL6A3P12111 3177 aa23.46■■□□□ 1.35
UBE2D3-220ENST00000505307 FRMPD2Q68DX3 1309 aaPredicted RBP23.45■■□□□ 1.34
UBE2D3-220ENST00000505307 CTAGE5O15320 804 aa23.45■■□□□ 1.34
UBE2D3-220ENST00000505307 ZEB2O60315 1214 aa23.45■■□□□ 1.34
UBE2D3-220ENST00000505307 ZNF697Q5TEC3 545 aa23.45■■□□□ 1.34
UBE2D3-220ENST00000505307 IQCA1Q86XH1 822 aa23.45■■□□□ 1.34
UBE2D3-220ENST00000505307 TBX21Q9UL17 535 aa23.45■■□□□ 1.34
UBE2D3-220ENST00000505307 ASTN1O14525 1302 aa23.44■■□□□ 1.34
UBE2D3-220ENST00000505307 WDR19Q8NEZ3 1342 aa23.44■■□□□ 1.34
UBE2D3-220ENST00000505307 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.44■■□□□ 1.34
UBE2D3-220ENST00000505307 TLR3O15455 904 aaKnown RBP23.44■■□□□ 1.34
UBE2D3-220ENST00000505307 TIMP1P01033 207 aa23.44■■□□□ 1.34
UBE2D3-220ENST00000505307 BAATQ14032 418 aaPredicted RBP23.44■■□□□ 1.34
UBE2D3-220ENST00000505307 TLK2Q86UE8 772 aa23.44■■□□□ 1.34
UBE2D3-220ENST00000505307 DSCC1Q9BVC3 393 aa23.44■■□□□ 1.34
UBE2D3-220ENST00000505307 CTNNA3Q9UI47 895 aa23.44■■□□□ 1.34
UBE2D3-220ENST00000505307 IRX5P78411 483 aaPredicted RBP23.43■■□□□ 1.34
UBE2D3-220ENST00000505307 FSCN1Q16658 493 aaKnown RBP23.43■■□□□ 1.34
UBE2D3-220ENST00000505307 TAPT1Q6NXT6 567 aa23.43■■□□□ 1.34
UBE2D3-220ENST00000505307 MPHOSPH6Q99547 160 aaKnown RBP23.43■■□□□ 1.34
UBE2D3-220ENST00000505307 MAF1Q9H063 256 aa23.43■■□□□ 1.34
UBE2D3-220ENST00000505307 NEDD4P46934 1319 aa23.42■■□□□ 1.34
UBE2D3-220ENST00000505307 PTPDC1A2A3K4 754 aa23.42■■□□□ 1.34
UBE2D3-220ENST00000505307 SMPD1P17405 629 aa23.42■■□□□ 1.34
UBE2D3-220ENST00000505307 IMMTQ16891 758 aaKnown RBP23.42■■□□□ 1.34
UBE2D3-220ENST00000505307 ANKS1AQ92625 1134 aa23.42■■□□□ 1.34
UBE2D3-220ENST00000505307 RNPC3Q96LT9 517 aaKnown RBP23.42■■□□□ 1.34
UBE2D3-220ENST00000505307 NFIBO00712 420 aa23.41■■□□□ 1.34
UBE2D3-220ENST00000505307 DYNC1LI2O43237 492 aaPredicted RBP23.41■■□□□ 1.34
UBE2D3-220ENST00000505307 ALDH5A1P51649 535 aaPredicted RBP23.41■■□□□ 1.34
UBE2D3-220ENST00000505307 BEX3Q00994 111 aa23.41■■□□□ 1.34
UBE2D3-220ENST00000505307 MFSD5Q6N075 450 aa23.41■■□□□ 1.34
UBE2D3-220ENST00000505307 RNF207Q6ZRF8 634 aa23.41■■□□□ 1.34
UBE2D3-220ENST00000505307 KIAA1211Q6ZU35 1233 aa23.41■■□□□ 1.34
UBE2D3-220ENST00000505307 FBXO16Q8IX29 292 aaPredicted RBP23.41■■□□□ 1.34
UBE2D3-220ENST00000505307 FAM126BQ8IXS8 530 aa23.41■■□□□ 1.34
UBE2D3-220ENST00000505307 B4DLN1 442 aa23.4■■□□□ 1.34
UBE2D3-220ENST00000505307 KDM4AO75164 1064 aa23.4■■□□□ 1.34
UBE2D3-220ENST00000505307 MRPL12P52815 198 aaKnown RBP23.4■■□□□ 1.34
UBE2D3-220ENST00000505307 EPHB4P54760 987 aa23.4■■□□□ 1.34
UBE2D3-220ENST00000505307 PPIGQ13427 754 aaKnown RBP eCLIP23.4■■□□□ 1.342e-7■□□□□ 10.5
UBE2D3-220ENST00000505307 DUSP28Q4G0W2 176 aa23.4■■□□□ 1.34
UBE2D3-220ENST00000505307 EEPD1Q7L9B9 569 aa23.4■■□□□ 1.34
UBE2D3-220ENST00000505307 SLC43A3Q8NBI5 491 aa23.4■■□□□ 1.34
UBE2D3-220ENST00000505307 RGS22Q8NE09 1264 aa23.4■■□□□ 1.34
UBE2D3-220ENST00000505307 CLEC4DQ8WXI8 215 aa23.4■■□□□ 1.34
UBE2D3-220ENST00000505307 FAM161BQ96MY7 647 aa23.4■■□□□ 1.34
UBE2D3-220ENST00000505307 KRT23Q9C075 422 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms