RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 CCDC88AQ3V6T2 1871 aa14.58□□□□□ -0.08
PTPN7-217ENST00000495688 NUTM2BA6NNL0 878 aaPredicted RBP14.58□□□□□ -0.08
PTPN7-217ENST00000495688 NUTM2EB1AL46 878 aaPredicted RBP14.58□□□□□ -0.08
PTPN7-217ENST00000495688 KLRF2D3W0D1 207 aa14.58□□□□□ -0.08
PTPN7-217ENST00000495688 ZNF185O15231 689 aa14.58□□□□□ -0.08
PTPN7-217ENST00000495688 SRGNP10124 158 aa14.58□□□□□ -0.08
PTPN7-217ENST00000495688 ERCC3P19447 782 aa14.58□□□□□ -0.08
PTPN7-217ENST00000495688 TECP42680 631 aa14.58□□□□□ -0.08
PTPN7-217ENST00000495688 IRX5P78411 483 aaPredicted RBP14.58□□□□□ -0.08
PTPN7-217ENST00000495688 TBC1D8BQ0IIM8 1120 aa14.58□□□□□ -0.08
PTPN7-217ENST00000495688 STIM1Q13586 685 aa14.58□□□□□ -0.08
PTPN7-217ENST00000495688 ZSCAN26Q16670 478 aa14.58□□□□□ -0.08
PTPN7-217ENST00000495688 CNOT6LQ96LI5 555 aaKnown RBP14.58□□□□□ -0.08
PTPN7-217ENST00000495688 TRIM9Q9C026 710 aa14.58□□□□□ -0.08
PTPN7-217ENST00000495688 VAT1LQ9HCJ6 419 aa14.58□□□□□ -0.08
PTPN7-217ENST00000495688 EXOC1Q9NV70 894 aa14.58□□□□□ -0.08
PTPN7-217ENST00000495688 LDHBP07195 334 aaKnown RBP14.57□□□□□ -0.08
PTPN7-217ENST00000495688 DNM2P50570 870 aa14.57□□□□□ -0.08
PTPN7-217ENST00000495688 TSR1Q2NL82 804 aaKnown RBP14.57□□□□□ -0.08
PTPN7-217ENST00000495688 USP17L2Q6R6M4 530 aa14.57□□□□□ -0.08
PTPN7-217ENST00000495688 KIAA1328Q86T90 577 aa14.57□□□□□ -0.08
PTPN7-217ENST00000495688 ZNF444Q8N0Y2 327 aaPredicted RBP14.57□□□□□ -0.08
PTPN7-217ENST00000495688 CCDC102AQ96A19 550 aa14.57□□□□□ -0.08
PTPN7-217ENST00000495688 EXOC4Q96A65 974 aa14.57□□□□□ -0.08
PTPN7-217ENST00000495688 PCMTD1Q96MG8 357 aaPredicted RBP14.57□□□□□ -0.08
PTPN7-217ENST00000495688 ANKRD2Q9GZV1 360 aa14.57□□□□□ -0.08
PTPN7-217ENST00000495688 NHEJ1Q9H9Q4 299 aaPredicted RBP14.57□□□□□ -0.08
PTPN7-217ENST00000495688 COL5A3P25940 1745 aaPredicted RBP14.57□□□□□ -0.08
PTPN7-217ENST00000495688 MACROD2A1Z1Q3 448 aa14.57□□□□□ -0.08
PTPN7-217ENST00000495688 PALM3A6NDB9 673 aaPredicted RBP14.57□□□□□ -0.08
PTPN7-217ENST00000495688 PLEKP08567 350 aaPredicted RBP14.57□□□□□ -0.08
PTPN7-217ENST00000495688 TM4SF1P30408 202 aa14.57□□□□□ -0.08
PTPN7-217ENST00000495688 NAPAP54920 295 aa14.57□□□□□ -0.08
PTPN7-217ENST00000495688 ASIC1P78348 528 aa14.57□□□□□ -0.08
PTPN7-217ENST00000495688 RAD51AP2Q09MP3 1159 aa14.57□□□□□ -0.08
PTPN7-217ENST00000495688 KRT26Q7Z3Y9 468 aa14.57□□□□□ -0.08
PTPN7-217ENST00000495688 CCDC148Q8NFR7 591 aa14.57□□□□□ -0.08
PTPN7-217ENST00000495688 SMARCC1Q92922 1105 aaPredicted RBP14.57□□□□□ -0.08
PTPN7-217ENST00000495688 P2RX5Q93086 422 aa14.57□□□□□ -0.08
PTPN7-217ENST00000495688 ANKIB1Q9P2G1 1089 aa14.57□□□□□ -0.08
PTPN7-217ENST00000495688 SAR1BQ9Y6B6 198 aa14.57□□□□□ -0.08
PTPN7-217ENST00000495688 ROBO1Q9Y6N7 1651 aa14.56□□□□□ -0.08
PTPN7-217ENST00000495688 IRS2Q9Y4H2 1338 aa14.56□□□□□ -0.08
PTPN7-217ENST00000495688 CAPN2P17655 700 aa14.56□□□□□ -0.08
PTPN7-217ENST00000495688 RASA1P20936 1047 aa14.56□□□□□ -0.08
PTPN7-217ENST00000495688 NFIXQ14938 502 aa14.56□□□□□ -0.08
PTPN7-217ENST00000495688 MEA1Q16626 185 aa14.56□□□□□ -0.08
PTPN7-217ENST00000495688 MIIPQ5JXC2 388 aa14.56□□□□□ -0.08
PTPN7-217ENST00000495688 ANKS1AQ92625 1134 aa14.56□□□□□ -0.08
PTPN7-217ENST00000495688 JAKMIP2Q96AA8 810 aa14.56□□□□□ -0.08
PTPN7-217ENST00000495688 TCP11L1Q9NUJ3 509 aa14.56□□□□□ -0.08
PTPN7-217ENST00000495688 THRAP3Q9Y2W1 955 aaKnown RBP14.56□□□□□ -0.08
PTPN7-217ENST00000495688 MYH1P12882 1939 aa14.56□□□□□ -0.08
PTPN7-217ENST00000495688 OR52Z1P0C646 297 aa14.56□□□□□ -0.08
PTPN7-217ENST00000495688 MTIF2P46199 727 aaKnown RBP14.56□□□□□ -0.08
PTPN7-217ENST00000495688 GSPT2Q8IYD1 628 aaKnown RBP14.56□□□□□ -0.08
PTPN7-217ENST00000495688 DAGLBQ8NCG7 672 aa14.56□□□□□ -0.08
PTPN7-217ENST00000495688 SMCR8Q8TEV9 937 aaPredicted RBP14.56□□□□□ -0.08
PTPN7-217ENST00000495688 ZFP91Q96JP5 570 aaPredicted RBP14.56□□□□□ -0.08
PTPN7-217ENST00000495688 PDE2AO00408 941 aaPredicted RBP14.55□□□□□ -0.08
PTPN7-217ENST00000495688 ZNF263O14978 683 aa14.55□□□□□ -0.08
PTPN7-217ENST00000495688 CCNE1P24864 410 aa14.55□□□□□ -0.08
PTPN7-217ENST00000495688 GNAQP50148 359 aa14.55□□□□□ -0.08
PTPN7-217ENST00000495688 KIAA0895Q8NCT3 520 aa14.55□□□□□ -0.08
PTPN7-217ENST00000495688 MMTAG2Q9BU76 263 aaKnown RBP14.55□□□□□ -0.08
PTPN7-217ENST00000495688 NOC4LQ9BVI4 516 aaKnown RBP14.55□□□□□ -0.08
PTPN7-217ENST00000495688 SLC39A2Q9NP94 309 aa14.55□□□□□ -0.08
PTPN7-217ENST00000495688 SPATA31A5Q5VU36 1347 aa14.55□□□□□ -0.08
PTPN7-217ENST00000495688 SPATA31A7Q8IWB4 1347 aa14.55□□□□□ -0.08
PTPN7-217ENST00000495688 SMCO2A6NFE2 343 aa14.55□□□□□ -0.08
PTPN7-217ENST00000495688 EPHB6O15197 1021 aa14.55□□□□□ -0.08
PTPN7-217ENST00000495688 USP14P54578 494 aa14.55□□□□□ -0.08
PTPN7-217ENST00000495688 DHTKD1Q96HY7 919 aaPredicted RBP14.55□□□□□ -0.08
PTPN7-217ENST00000495688 ZMYND12Q9H0C1 365 aa14.55□□□□□ -0.08
PTPN7-217ENST00000495688 BIN2Q9UBW5 565 aaPredicted RBP14.55□□□□□ -0.08
PTPN7-217ENST00000495688 EIF3JO75822 258 aaKnown RBP14.54□□□□□ -0.08
PTPN7-217ENST00000495688 PAPD7Q5XG87 772 aaKnown RBP14.54□□□□□ -0.08
PTPN7-217ENST00000495688 SPTY2D1Q68D10 685 aaPredicted RBP14.54□□□□□ -0.08
PTPN7-217ENST00000495688 WDR93Q6P2C0 686 aa14.54□□□□□ -0.08
PTPN7-217ENST00000495688 AEBP2Q6ZN18 517 aaPredicted RBP14.54□□□□□ -0.08
PTPN7-217ENST00000495688 POTEDQ86YR6 584 aa14.54□□□□□ -0.08
PTPN7-217ENST00000495688 UBA5Q9GZZ9 404 aa14.54□□□□□ -0.08
PTPN7-217ENST00000495688 SEMA6BQ9H3T3 888 aa14.54□□□□□ -0.08
PTPN7-217ENST00000495688 TMEM260Q9NX78 707 aa14.54□□□□□ -0.08
PTPN7-217ENST00000495688 GNPATO15228 680 aa14.54□□□□□ -0.08
PTPN7-217ENST00000495688 KRT86O43790 486 aa14.54□□□□□ -0.08
PTPN7-217ENST00000495688 MYL1P05976 194 aa14.54□□□□□ -0.08
PTPN7-217ENST00000495688 MYBL2P10244 700 aa14.54□□□□□ -0.08
PTPN7-217ENST00000495688 PRPHP41219 470 aa14.54□□□□□ -0.08
PTPN7-217ENST00000495688 TXKP42681 527 aa14.54□□□□□ -0.08
PTPN7-217ENST00000495688 TUBB4BP68371 445 aa14.54□□□□□ -0.08
PTPN7-217ENST00000495688 KRT83P78385 493 aa14.54□□□□□ -0.08
PTPN7-217ENST00000495688 FAM98CQ17RN3 349 aaKnown RBP14.54□□□□□ -0.08
PTPN7-217ENST00000495688 TBCKQ8TEA7 893 aa14.54□□□□□ -0.08
PTPN7-217ENST00000495688 NYXQ9GZU5 481 aa14.54□□□□□ -0.08
PTPN7-217ENST00000495688 NARFQ9UHQ1 456 aa14.54□□□□□ -0.08
PTPN7-217ENST00000495688 TULP2O00295 520 aa14.53□□□□□ -0.08
PTPN7-217ENST00000495688 LAD1O00515 517 aa14.53□□□□□ -0.08
PTPN7-217ENST00000495688 ZBED6P86452 979 aa14.53□□□□□ -0.08
PTPN7-217ENST00000495688 NONOQ15233 471 aaKnown RBP eCLIP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms