RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 RASGRP2Q7LDG7 609 aa15.37■□□□□ 0.05
BRAT1-205ENST00000473879 NCAPG2Q86XI2 1143 aa15.37■□□□□ 0.05
BRAT1-205ENST00000473879 RAB11FIP4Q86YS3 637 aa15.37■□□□□ 0.05
BRAT1-205ENST00000473879 FANCBQ8NB91 859 aa15.37■□□□□ 0.05
BRAT1-205ENST00000473879 NSUN7Q8NE18 718 aaKnown RBP15.37■□□□□ 0.05
BRAT1-205ENST00000473879 U2AF1L4Q8WU68 220 aaKnown RBP15.37■□□□□ 0.05
BRAT1-205ENST00000473879 SHISA4Q96DD7 197 aa15.37■□□□□ 0.05
BRAT1-205ENST00000473879 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.37■□□□□ 0.052e-11■■■■■ 64.9
BRAT1-205ENST00000473879 HMX1Q9NP08 348 aaPredicted RBP15.37■□□□□ 0.05
BRAT1-205ENST00000473879 PTPDC1A2A3K4 754 aa15.36■□□□□ 0.05
BRAT1-205ENST00000473879 ATP2A1O14983 1001 aa15.36■□□□□ 0.05
BRAT1-205ENST00000473879 FDX1P10109 184 aa15.36■□□□□ 0.05
BRAT1-205ENST00000473879 PDHBP11177 359 aa15.36■□□□□ 0.05
BRAT1-205ENST00000473879 PDIA4P13667 645 aaKnown RBP15.36■□□□□ 0.05
BRAT1-205ENST00000473879 GJB2P29033 226 aa15.36■□□□□ 0.05
BRAT1-205ENST00000473879 ADORA2AP29274 412 aa15.36■□□□□ 0.05
BRAT1-205ENST00000473879 SLC1A4P43007 532 aa15.36■□□□□ 0.05
BRAT1-205ENST00000473879 CCL14Q16627 93 aa15.36■□□□□ 0.05
BRAT1-205ENST00000473879 BTNL9Q6UXG8 535 aa15.36■□□□□ 0.05
BRAT1-205ENST00000473879 FAM160B2Q86V87 743 aa15.36■□□□□ 0.05
BRAT1-205ENST00000473879 CCDC144CPQ8IYA2 1237 aa15.36■□□□□ 0.05
BRAT1-205ENST00000473879 SMARCC2Q8TAQ2 1214 aa15.36■□□□□ 0.05
BRAT1-205ENST00000473879 NPLOC4Q8TAT6 608 aa15.36■□□□□ 0.05
BRAT1-205ENST00000473879 CRISPLD2Q9H0B8 497 aa15.36■□□□□ 0.05
BRAT1-205ENST00000473879 CHMP5Q9NZZ3 219 aa15.36■□□□□ 0.05
BRAT1-205ENST00000473879 TMEM232C9JQI7 657 aa15.35■□□□□ 0.05
BRAT1-205ENST00000473879 ZBED4O75132 1171 aa15.35■□□□□ 0.05
BRAT1-205ENST00000473879 FCER1AP12319 257 aa15.35■□□□□ 0.05
BRAT1-205ENST00000473879 PRKAR2AP13861 404 aaKnown RBP15.35■□□□□ 0.05
BRAT1-205ENST00000473879 PDCP20941 246 aa15.35■□□□□ 0.05
BRAT1-205ENST00000473879 CDC27P30260 824 aa15.35■□□□□ 0.05
BRAT1-205ENST00000473879 DDIT3P35638 169 aa15.35■□□□□ 0.05
BRAT1-205ENST00000473879 GNAQP50148 359 aa15.35■□□□□ 0.05
BRAT1-205ENST00000473879 STAT2P52630 851 aa15.35■□□□□ 0.05
BRAT1-205ENST00000473879 CACNB2Q08289 660 aaPredicted RBP15.35■□□□□ 0.05
BRAT1-205ENST00000473879 GRM4Q14833 912 aa15.35■□□□□ 0.05
BRAT1-205ENST00000473879 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.35■□□□□ 0.05
BRAT1-205ENST00000473879 DPP9Q86TI2 863 aa15.35■□□□□ 0.05
BRAT1-205ENST00000473879 FAM184AQ8NB25 1140 aa15.35■□□□□ 0.05
BRAT1-205ENST00000473879 CHURC1Q8WUH1 139 aa15.35■□□□□ 0.05
BRAT1-205ENST00000473879 DCAF4Q8WV16 495 aa15.35■□□□□ 0.05
BRAT1-205ENST00000473879 KIFC2Q96AC6 838 aa15.35■□□□□ 0.05
BRAT1-205ENST00000473879 DEFB118Q96PH6 123 aa15.35■□□□□ 0.05
BRAT1-205ENST00000473879 TEX13BQ9BXU2 312 aa15.35■□□□□ 0.05
BRAT1-205ENST00000473879 SLC38A10Q9HBR0 1119 aa15.35■□□□□ 0.05
BRAT1-205ENST00000473879 SLC5A4Q9NY91 659 aa15.35■□□□□ 0.05
BRAT1-205ENST00000473879 STK36Q9NRP7 1315 aa15.35■□□□□ 0.05
BRAT1-205ENST00000473879 CTDNEP1O95476 244 aa15.34■□□□□ 0.05
BRAT1-205ENST00000473879 IGHA2P01877 340 aa15.34■□□□□ 0.05
BRAT1-205ENST00000473879 IFNAR1P17181 557 aa15.34■□□□□ 0.05
BRAT1-205ENST00000473879 ADD1P35611 737 aaKnown RBP15.34■□□□□ 0.05
BRAT1-205ENST00000473879 OAZ1P54368 228 aa15.34■□□□□ 0.05
BRAT1-205ENST00000473879 NUCB2P80303 420 aa15.34■□□□□ 0.05
BRAT1-205ENST00000473879 MFSD14CQ5VZR4 134 aa15.34■□□□□ 0.05
BRAT1-205ENST00000473879 OLFML2BQ68BL8 750 aa15.34■□□□□ 0.05
BRAT1-205ENST00000473879 TRIM22Q8IYM9 498 aa15.34■□□□□ 0.05
BRAT1-205ENST00000473879 LZTS2Q9BRK4 669 aa15.34■□□□□ 0.05
BRAT1-205ENST00000473879 FAM217BQ9NTX9 383 aaPredicted RBP15.34■□□□□ 0.05
BRAT1-205ENST00000473879 FLRT1Q9NZU1 646 aa15.34■□□□□ 0.05
BRAT1-205ENST00000473879 CTDP1Q9Y5B0 961 aaPredicted RBP15.34■□□□□ 0.05
BRAT1-205ENST00000473879 FRMPD3Q5JV73 1810 aa15.33■□□□□ 0.05
BRAT1-205ENST00000473879 JAK2O60674 1132 aa15.33■□□□□ 0.04
BRAT1-205ENST00000473879 COBLO75128 1261 aa15.33■□□□□ 0.04
BRAT1-205ENST00000473879 TFRCP02786 760 aaKnown RBP15.33■□□□□ 0.04
BRAT1-205ENST00000473879 PARP1P09874 1014 aaKnown RBP15.33■□□□□ 0.04
BRAT1-205ENST00000473879 SSRP1Q08945 709 aaKnown RBP15.33■□□□□ 0.04
BRAT1-205ENST00000473879 ZNF543Q08ER8 600 aa15.33■□□□□ 0.04
BRAT1-205ENST00000473879 ASPRV1Q53RT3 343 aa15.33■□□□□ 0.04
BRAT1-205ENST00000473879 SNRNP48Q6IEG0 339 aaKnown RBP15.33■□□□□ 0.04
BRAT1-205ENST00000473879 TMTC3Q6ZXV5 915 aa15.33■□□□□ 0.04
BRAT1-205ENST00000473879 UBE2Q1Q7Z7E8 422 aa15.33■□□□□ 0.04
BRAT1-205ENST00000473879 MMP19Q99542 508 aa15.33■□□□□ 0.04
BRAT1-205ENST00000473879 AKAP17AQ02040 695 aaKnown RBP15.32■□□□□ 0.04
BRAT1-205ENST00000473879 KCTD2Q14681 263 aa15.32■□□□□ 0.04
BRAT1-205ENST00000473879 NTRK3Q16288 839 aa15.32■□□□□ 0.04
BRAT1-205ENST00000473879 KCTD1Q719H9 257 aa15.32■□□□□ 0.04
BRAT1-205ENST00000473879 CPXCR1Q8N123 301 aa15.32■□□□□ 0.04
BRAT1-205ENST00000473879 WASF1Q92558 559 aa15.32■□□□□ 0.04
BRAT1-205ENST00000473879 DDX11Q96FC9 970 aa15.32■□□□□ 0.04
BRAT1-205ENST00000473879 RNF26Q9BY78 433 aaPredicted RBP15.32■□□□□ 0.04
BRAT1-205ENST00000473879 RAVER2Q9HCJ3 691 aaKnown RBP15.32■□□□□ 0.04
BRAT1-205ENST00000473879 RBM27Q9P2N5 1060 aaKnown RBP15.32■□□□□ 0.04
BRAT1-205ENST00000473879 ORC3Q9UBD5 711 aaPredicted RBP15.32■□□□□ 0.04
BRAT1-205ENST00000473879 ISY1Q9ULR0 285 aaKnown RBP15.32■□□□□ 0.04
BRAT1-205ENST00000473879 MTMR7Q9Y216 660 aa15.32■□□□□ 0.04
BRAT1-205ENST00000473879 DIS3Q9Y2L1 958 aaKnown RBP15.32■□□□□ 0.04
BRAT1-205ENST00000473879 RIPK3Q9Y572 518 aa15.32■□□□□ 0.04
BRAT1-205ENST00000473879 ZNF536O15090 1300 aa15.32■□□□□ 0.04
BRAT1-205ENST00000473879 MYH6P13533 1939 aa15.31■□□□□ 0.04
BRAT1-205ENST00000473879 CCND3P30281 292 aaPredicted RBP15.31■□□□□ 0.04
BRAT1-205ENST00000473879 IKQ13123 557 aaPredicted RBP15.31■□□□□ 0.04
BRAT1-205ENST00000473879 GPATCH4Q5T3I0 446 aaKnown RBP15.31■□□□□ 0.04
BRAT1-205ENST00000473879 ANKLE1Q8NAG6 615 aa15.31■□□□□ 0.04
BRAT1-205ENST00000473879 MAML3Q96JK9 1138 aa15.31■□□□□ 0.04
BRAT1-205ENST00000473879 SLC26A6Q9BXS9 759 aa15.31■□□□□ 0.04
BRAT1-205ENST00000473879 MAD2L2Q9UI95 211 aa15.31■□□□□ 0.04
BRAT1-205ENST00000473879 PLXNA1Q9UIW2 1896 aa15.31■□□□□ 0.04
BRAT1-205ENST00000473879 PALM3A6NDB9 673 aaPredicted RBP15.3■□□□□ 0.04
BRAT1-205ENST00000473879 FARP2O94887 1054 aaPredicted RBP15.3■□□□□ 0.04
BRAT1-205ENST00000473879 PLEKHA8P1O95397 391 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms