RNA–Protein interactions for RNA: ENST00000473270.1

APTX-218, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 645 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-218ENST00000473270 RCSD1Q6JBY9 416 aa23.01■■□□□ 1.27
APTX-218ENST00000473270 COL25A1Q9BXS0 654 aaPredicted RBP23.01■■□□□ 1.27
APTX-218ENST00000473270 UPF3AQ9H1J1 476 aaKnown RBP23.01■■□□□ 1.27
APTX-218ENST00000473270 MTMR7Q9Y216 660 aa23.01■■□□□ 1.27
APTX-218ENST00000473270 CNTN2Q02246 1040 aa23■■□□□ 1.27
APTX-218ENST00000473270 CCDC96Q2M329 555 aa23■■□□□ 1.27
APTX-218ENST00000473270 CCSAPQ6IQ19 270 aaPredicted RBP23■■□□□ 1.27
APTX-218ENST00000473270 AGBL1Q96MI9 1066 aa23■■□□□ 1.27
APTX-218ENST00000473270 SEZ6LQ9BYH1 1024 aa23■■□□□ 1.27
APTX-218ENST00000473270 MYADML2A6NDP7 307 aa22.99■■□□□ 1.27
APTX-218ENST00000473270 PLA2G6O60733 806 aa22.99■■□□□ 1.27
APTX-218ENST00000473270 DNAJB2P25686 324 aa22.99■■□□□ 1.27
APTX-218ENST00000473270 EPHB4P54760 987 aa22.99■■□□□ 1.27
APTX-218ENST00000473270 PSRC1Q6PGN9 363 aaPredicted RBP22.99■■□□□ 1.27
APTX-218ENST00000473270 KCTD1Q719H9 257 aa22.99■■□□□ 1.27
APTX-218ENST00000473270 TTYH1Q9H313 450 aaPredicted RBP22.99■■□□□ 1.27
APTX-218ENST00000473270 A1CFQ9NQ94 594 aaKnown RBP22.99■■□□□ 1.27
APTX-218ENST00000473270 TBX21Q9UL17 535 aa22.99■■□□□ 1.27
APTX-218ENST00000473270 CCPG1Q9ULG6 757 aa22.99■■□□□ 1.27
APTX-218ENST00000473270 TLK2Q86UE8 772 aa22.98■■□□□ 1.27
APTX-218ENST00000473270 FAM133AQ8N9E0 248 aa22.98■■□□□ 1.27
APTX-218ENST00000473270 SYMPKQ92797 1274 aaKnown RBP22.98■■□□□ 1.27
APTX-218ENST00000473270 TIFAQ96CG3 184 aa22.98■■□□□ 1.27
APTX-218ENST00000473270 MPHOSPH6Q99547 160 aaKnown RBP22.98■■□□□ 1.27
APTX-218ENST00000473270 PPP1R12CQ9BZL4 782 aa22.98■■□□□ 1.27
APTX-218ENST00000473270 DIAPH3Q9NSV4 1193 aa22.98■■□□□ 1.27
APTX-218ENST00000473270 CUL9Q8IWT3 2517 aa22.97■■□□□ 1.27
APTX-218ENST00000473270 CDK7P50613 346 aa22.97■■□□□ 1.27
APTX-218ENST00000473270 CTDSPL2Q05D32 466 aa22.97■■□□□ 1.27
APTX-218ENST00000473270 FSCN1Q16658 493 aaKnown RBP22.97■■□□□ 1.27
APTX-218ENST00000473270 IQSEC1Q6DN90 963 aa22.97■■□□□ 1.27
APTX-218ENST00000473270 NSMFQ6X4W1 530 aa22.97■■□□□ 1.27
APTX-218ENST00000473270 DCAF4Q8WV16 495 aa22.97■■□□□ 1.27
APTX-218ENST00000473270 GAS2L1Q99501 681 aaPredicted RBP22.97■■□□□ 1.27
APTX-218ENST00000473270 ADD3Q9UEY8 706 aaKnown RBP22.97■■□□□ 1.27
APTX-218ENST00000473270 BEX3Q00994 111 aa22.96■■□□□ 1.27
APTX-218ENST00000473270 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.96■■□□□ 1.27
APTX-218ENST00000473270 ZNF576Q9H609 170 aa22.96■■□□□ 1.27
APTX-218ENST00000473270 MSRAQ9UJ68 235 aa22.96■■□□□ 1.27
APTX-218ENST00000473270 PNMA2Q9UL42 364 aa22.96■■□□□ 1.27
APTX-218ENST00000473270 PRR12Q9ULL5 1215 aa22.96■■□□□ 1.27
APTX-218ENST00000473270 UNC80Q8N2C7 3258 aa22.96■■□□□ 1.27
APTX-218ENST00000473270 DYNC1LI2O43237 492 aaPredicted RBP22.95■■□□□ 1.26
APTX-218ENST00000473270 CSF2RAP15509 400 aa22.95■■□□□ 1.26
APTX-218ENST00000473270 RRP12Q5JTH9 1297 aaKnown RBP22.95■■□□□ 1.26
APTX-218ENST00000473270 HELLSQ9NRZ9 838 aa22.95■■□□□ 1.26
APTX-218ENST00000473270 ADCY6O43306 1168 aa22.94■■□□□ 1.26
APTX-218ENST00000473270 BRDTQ58F21 947 aaPredicted RBP22.94■■□□□ 1.26
APTX-218ENST00000473270 CXCL17Q6UXB2 119 aa22.94■■□□□ 1.26
APTX-218ENST00000473270 EEPD1Q7L9B9 569 aa22.94■■□□□ 1.26
APTX-218ENST00000473270 FAM126BQ8IXS8 530 aa22.94■■□□□ 1.26
APTX-218ENST00000473270 FGD4Q96M96 766 aa22.94■■□□□ 1.26
APTX-218ENST00000473270 HIPK3Q9H422 1215 aa22.94■■□□□ 1.26
APTX-218ENST00000473270 VTA1Q9NP79 307 aa22.94■■□□□ 1.26
APTX-218ENST00000473270 CYP39A1Q9NYL5 469 aa22.94■■□□□ 1.26
APTX-218ENST00000473270 Q9Y3F1 56 aa22.94■■□□□ 1.26
APTX-218ENST00000473270 ZNF536O15090 1300 aa22.93■■□□□ 1.26
APTX-218ENST00000473270 SOWAHBA6NEL2 793 aa22.93■■□□□ 1.26
APTX-218ENST00000473270 ICAM1P05362 532 aa22.93■■□□□ 1.26
APTX-218ENST00000473270 SNAP25P60880 206 aa22.93■■□□□ 1.26
APTX-218ENST00000473270 IRX5P78411 483 aaPredicted RBP22.93■■□□□ 1.26
APTX-218ENST00000473270 ITGA7Q13683 1181 aa22.93■■□□□ 1.26
APTX-218ENST00000473270 TMEM240Q5SV17 173 aa22.93■■□□□ 1.26
APTX-218ENST00000473270 CASC1Q6TDU7 716 aa22.93■■□□□ 1.26
APTX-218ENST00000473270 KIAA1211Q6ZU35 1233 aa22.93■■□□□ 1.26
APTX-218ENST00000473270 RUFY2Q8WXA3 655 aa22.93■■□□□ 1.26
APTX-218ENST00000473270 GPHNQ9NQX3 736 aaPredicted RBP22.93■■□□□ 1.26
APTX-218ENST00000473270 ANAPC4Q9UJX5 808 aa22.93■■□□□ 1.26
APTX-218ENST00000473270 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.93■■□□□ 1.26
APTX-218ENST00000473270 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.92■■□□□ 1.26
APTX-218ENST00000473270 B4DLN1 442 aa22.92■■□□□ 1.26
APTX-218ENST00000473270 NMT2O60551 498 aa22.92■■□□□ 1.26
APTX-218ENST00000473270 FGBP02675 491 aa22.92■■□□□ 1.26
APTX-218ENST00000473270 MRPL12P52815 198 aaKnown RBP22.92■■□□□ 1.26
APTX-218ENST00000473270 MFAP1P55081 439 aaKnown RBP22.92■■□□□ 1.26
APTX-218ENST00000473270 NKX3-2P78367 333 aa22.92■■□□□ 1.26
APTX-218ENST00000473270 NMIQ13287 307 aaPredicted RBP22.92■■□□□ 1.26
APTX-218ENST00000473270 GRIN2CQ14957 1233 aa22.92■■□□□ 1.26
APTX-218ENST00000473270 RAB30Q15771 203 aa22.92■■□□□ 1.26
APTX-218ENST00000473270 MCMDC2Q4G0Z9 681 aa22.92■■□□□ 1.26
APTX-218ENST00000473270 ZNF365Q70YC5 407 aa22.92■■□□□ 1.26
APTX-218ENST00000473270 KATNBL1Q9H079 304 aa22.92■■□□□ 1.26
APTX-218ENST00000473270 IL23AQ9NPF7 189 aa22.92■■□□□ 1.26
APTX-218ENST00000473270 RAD50Q92878 1312 aa22.91■■□□□ 1.26
APTX-218ENST00000473270 PTPDC1A2A3K4 754 aa22.91■■□□□ 1.26
APTX-218ENST00000473270 ORC4O43929 436 aa22.91■■□□□ 1.26
APTX-218ENST00000473270 ACRP10323 421 aa22.91■■□□□ 1.26
APTX-218ENST00000473270 TOP1P11387 765 aaKnown RBP22.91■■□□□ 1.26
APTX-218ENST00000473270 CYP2C18P33260 490 aa22.91■■□□□ 1.26
APTX-218ENST00000473270 MUM1L1Q5H9M0 696 aa22.91■■□□□ 1.26
APTX-218ENST00000473270 CWC27Q6UX04 472 aaKnown RBP22.91■■□□□ 1.26
APTX-218ENST00000473270 FBXO16Q8IX29 292 aaPredicted RBP22.91■■□□□ 1.26
APTX-218ENST00000473270 RPUSD2Q8IZ73 545 aaKnown RBP22.91■■□□□ 1.26
APTX-218ENST00000473270 IL17RBQ9NRM6 502 aa22.91■■□□□ 1.26
APTX-218ENST00000473270 GNEQ9Y223 722 aaKnown RBP22.91■■□□□ 1.26
APTX-218ENST00000473270 SMPD1P17405 629 aa22.9■■□□□ 1.26
APTX-218ENST00000473270 ALX1Q15699 326 aa22.9■■□□□ 1.26
APTX-218ENST00000473270 SYDE2Q5VT97 1194 aa22.9■■□□□ 1.26
APTX-218ENST00000473270 FAM227BQ96M60 508 aa22.9■■□□□ 1.26
APTX-218ENST00000473270 POLR3EQ9NVU0 708 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms