RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 GPRC5AQ8NFJ5 357 aa5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 ACER1Q8TDN7 264 aa5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 SDR42E1Q8WUS8 393 aa5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 DNAJC2Q99543 621 aaKnown RBP5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 RIOK1Q9BRS2 568 aaKnown RBP5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 PAGR1Q9BTK6 254 aa5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 PORCNQ9H237 461 aa5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 BOLA2Q9H3K6 86 aa5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 ARHGEF10LQ9HCE6 1279 aa5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 MYH8P13535 1937 aa5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 COL2A1P02458 1487 aaPredicted RBP5.69□□□□□ -1.5
GTF3C3-208ENST00000455546 MAST2Q6P0Q8 1798 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 MPHOSPH10O00566 681 aaKnown RBP5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 PRKAB2O43741 272 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 SMARCA5O60264 1052 aaPredicted RBP5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 GDF9O60383 454 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 CNMDO75829 334 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 IFIT2P09913 472 aaKnown RBP5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 CYP2D6P10635 497 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 PDE6AP16499 860 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 GUCY1A2P33402 732 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 SHMT1P34896 483 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 GDF10P55107 478 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 SEPT2Q15019 361 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 CCL14Q16627 93 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 ABCB5Q2M3G0 1257 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 C20orf194Q5TEA3 1177 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 PHLDB3Q6NSJ2 640 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 TATDN1Q6P1N9 297 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 TRIM67Q6ZTA4 783 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 ERC1Q8IUD2 1116 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 CCAR1Q8IX12 1150 aaKnown RBP5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 RPAP2Q8IXW5 612 aaPredicted RBP5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 CYP4X1Q8N118 509 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 CLASRPQ8N2M8 674 aaKnown RBP5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 SLC44A5Q8NCS7 719 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 SNIP1Q8TAD8 396 aaKnown RBP5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 TRIB2Q92519 343 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 ITPKCQ96DU7 683 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 DYNLL2Q96FJ2 89 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 MKNK1Q9BUB5 465 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 HTATIP2Q9BUP3 242 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 ZFAND3Q9H8U3 227 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 ARMT1Q9H993 441 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 ETNK1Q9HBU6 452 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 PAK6Q9NQU5 681 aaPredicted RBP5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 ZBTB40Q9NUA8 1239 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 PGPEP1Q9NXJ5 209 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 MCM9Q9NXL9 1143 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 MORF4L1Q9UBU8 362 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 STAP2Q9UGK3 403 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 SERPINB13Q9UIV8 391 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 V9GY48 417 aaPredicted RBP5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 ZBED9Q6R2W3 1325 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 RPTORQ8N122 1335 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 ZNF532Q9HCE3 1301 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 MYH7P12883 1935 aa5.68□□□□□ -1.5
GTF3C3-208ENST00000455546 CYP2D7A0A087X1C5 515 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 A0A1W2PRG0 241 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 TCRBV5S4A2TA0A5A2 114 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 ZIC2O95409 532 aaPredicted RBP5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 HMGCRP04035 888 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 SYN1P17600 705 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 CCND3P30281 292 aaPredicted RBP5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 ERVK-24P63145 666 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 CACNB2Q08289 660 aaPredicted RBP5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 KCNA1Q09470 495 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 HSP90AB4PQ58FF6 505 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 KIAA1755Q5JYT7 1200 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 TBCELQ5QJ74 424 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 WDR78Q5VTH9 848 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 CATSPERGQ6ZRH7 1159 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 CYP2U1Q7Z449 544 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 GPR142Q7Z601 462 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 TTC6Q86TZ1 520 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 CLEC10AQ8IUN9 316 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 LCORLQ8N3X6 602 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 CLP1Q92989 425 aaKnown RBP5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 KIF1BPQ96EK5 621 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 AGBL1Q96MI9 1066 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 FEZ1Q99689 392 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 CABP5Q9NP86 173 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 DCP1AQ9NPI6 582 aaPredicted RBP5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 FLRT1Q9NZU1 646 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 BTBD7Q9P203 1132 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 RCAN3Q9UKA8 241 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 DDX19BQ9UMR2 479 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 NR2E3Q9Y5X4 410 aa5.67□□□□□ -1.5
GTF3C3-208ENST00000455546 NAV1Q8NEY1 1877 aa5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 RLFQ13129 1914 aa5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 HMMRO75330 724 aa5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 SMPD1P17405 629 aa5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 VCAM1P19320 739 aa5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 WDR4P57081 412 aaKnown RBP5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 GABPAQ06546 454 aa5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 TTF1Q15361 905 aaPredicted RBP5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 SWI5Q1ZZU3 235 aa5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 NECAB2Q7Z6G3 386 aa5.66□□□□□ -1.5
GTF3C3-208ENST00000455546 PLEKHH3Q7Z736 793 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms